##gff-version 3
HG03209_chrY	CAT	gene	80035	81811	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;gene_id=HG03209_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG03209_ch_G0000001;Name=LOC124905300
HG03209_chrY	CAT	transcript	80035	81811	9940	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG03209_ch_T0000001;Name=LOC124905300
HG03209_chrY	CAT	exon	80035	80064	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	80035	80064	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	80035	80037	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG03209_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	80065	80139	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03209_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	80140	80637	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	80140	80637	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	80638	80877	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03209_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	80878	81114	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	80878	81114	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	81115	81246	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	81115	81246	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81247	81553	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03209_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	81554	81591	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	81554	81591	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81592	81770	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03209_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	81771	81811	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03209_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	81771	81811	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03209_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	81809	81811	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.591;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000001;gene_id=HG03209_ch_G0000001;Parent=HG03209_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG03209_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	81170	109218	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=HG03209_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG03209_ch_G0000002;Name=PLCXD1
HG03209_chrY	CAT	transcript	81170	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000002;Name=PLCXD1
HG03209_chrY	CAT	exon	81170	81208	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81209	85917	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	85918	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000002:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000002;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	81170	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000003;Name=PLCXD1
HG03209_chrY	CAT	exon	81170	81208	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81209	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000003;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	81170	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000004;Name=PLCXD1
HG03209_chrY	CAT	exon	81170	81208	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81209	85917	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	85918	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000004;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	81170	109218	1000	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG03209_ch_T0000005;Name=PLCXD1
HG03209_chrY	CAT	exon	81170	81208	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81209	85917	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	85918	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	105270	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	105271	108454	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	108455	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=299.903;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000005;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000005:8;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	81567	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000006;Name=PLCXD1
HG03209_chrY	CAT	exon	81567	81581	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	81582	85917	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	85918	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000006:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000006;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	85595	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000007;Name=PLCXD1
HG03209_chrY	CAT	exon	85595	85692	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	85693	85917	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	85918	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000007:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000007;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	85817	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000008;Name=PLCXD1
HG03209_chrY	CAT	exon	85817	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000008:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000008;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	85817	109218	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG03209_ch_T0000009;Name=PLCXD1
HG03209_chrY	CAT	exon	85817	86120	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	86121	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	105657	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	105658	107767	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	107768	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000009;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000009:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	87900	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000010;Name=PLCXD1
HG03209_chrY	CAT	exon	87900	87942	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	87943	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000010:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000010;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	87940	109218	9920	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000011;Name=PLCXD1
HG03209_chrY	CAT	exon	87940	88054	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88055	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000011:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.66666666666666;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000011;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	88109	109218	9950	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03209_ch_T0000012;Name=PLCXD1
HG03209_chrY	CAT	exon	88109	88454	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88455	88587	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	88588	88735	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	88609	88735	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	88609	88611	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03209_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	88736	93091	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	93092	93228	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	93092	93228	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	93229	95008	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	95009	95137	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	95009	95137	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	95138	96107	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	96108	96263	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	96108	96263	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	96264	97643	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	97644	97827	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	97644	97827	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	97828	104974	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03209_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	104975	109218	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03209_ch_T0000012:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	104975	105213	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03209_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	105211	105213	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03209_ch_T0000012;gene_id=HG03209_ch_G0000002;Parent=HG03209_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03209_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	110621	126092	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG03209_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000003;Name=GTPBP6
HG03209_chrY	CAT	transcript	110621	124159	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03209_ch_T0000013;Name=GTPBP6
HG03209_chrY	CAT	exon	110621	111059	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	110936	111059	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	110936	110938	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03209_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	111060	113172	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113173	113325	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113173	113325	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113326	113544	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113545	113693	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113545	113693	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113694	118690	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	118691	118899	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	118691	118899	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	118900	120093	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	120094	120492	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	120094	120492	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	120493	121717	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	121718	121785	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	121718	121785	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	121786	122457	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122458	122588	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122458	122588	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122589	122796	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122797	122867	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122797	122814	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	122812	122814	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03209_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122868	124093	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124094	124159	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000013;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000013:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	110621	126092	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03209_ch_T0000014;Name=GTPBP6
HG03209_chrY	CAT	exon	110621	111059	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	110936	111059	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	110936	110938	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03209_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	111060	113172	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113173	113325	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113173	113325	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113326	113544	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113545	113693	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113545	113693	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113694	118690	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	118691	118899	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	118691	118899	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	118900	120333	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	120334	120492	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	120334	120492	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	120493	121717	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	121718	121785	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	121718	121785	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	121786	122457	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122458	122588	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122458	122588	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122589	122796	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122797	122867	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122797	122867	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122868	124227	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124228	124365	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	124228	124365	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124366	125734	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	125735	126092	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	125735	126083	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	126081	126083	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000014;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03209_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	110621	126092	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03209_ch_T0000015;Name=GTPBP6
HG03209_chrY	CAT	exon	110621	111059	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	110936	111059	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	110936	110938	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03209_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	111060	113172	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113173	113325	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113173	113325	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113326	113544	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113545	113693	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113545	113693	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113694	118690	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	118691	118899	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	118691	118899	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	118900	120093	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	120094	120492	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	120094	120492	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	120493	121717	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	121718	121785	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	121718	121785	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	121786	122457	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122458	122588	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122458	122588	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122589	122796	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122797	122867	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122797	122867	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122868	124227	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124228	124365	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	124228	124365	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124366	125734	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	125735	126092	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	125735	126083	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	126081	126083	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000015;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03209_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	110621	126092	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03209_ch_T0000016;Name=GTPBP6
HG03209_chrY	CAT	exon	110621	111059	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	110936	111059	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	110936	110938	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03209_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	111060	113172	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113173	113325	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113173	113325	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113326	113544	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113545	113693	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113545	113693	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113694	118690	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	118691	118899	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	118691	118899	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	118900	120093	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	120094	120492	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	120094	120492	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	120493	121717	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	121718	121785	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	121718	121785	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	121786	122457	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122458	122588	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122458	122588	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122589	122796	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122797	122867	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122797	122867	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122868	124227	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124228	124365	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	124228	124297	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	124295	124297	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03209_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124366	124569	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124570	124775	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124776	125734	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	125735	126092	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000016;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000016:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	110621	126092	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03209_ch_T0000017;Name=GTPBP6
HG03209_chrY	CAT	exon	110621	111059	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	110936	111059	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	110936	110938	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03209_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	111060	113172	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113173	113325	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113173	113325	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113326	113544	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	113545	113693	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	113545	113693	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	113694	118690	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	118691	118899	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	118691	118899	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	118900	120093	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	120094	120492	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	120094	120492	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	120493	121717	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	121718	121785	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	121718	121785	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	121786	122457	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122458	122588	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122458	122588	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122589	122796	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	122797	122867	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	122797	122867	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	122868	124227	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124228	124365	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	124228	124297	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03209_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	124295	124297	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03209_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124366	124569	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	124570	124710	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	124711	125734	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03209_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	125735	126092	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000017;gene_id=HG03209_ch_G0000003;Parent=HG03209_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03209_ch_T0000017:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	126441	128611	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;gene_id=HG03209_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap_pairwise;ID=HG03209_ch_G0000004;Name=LINC00685
HG03209_chrY	CAT	transcript	126441	128611	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000018;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03209_ch_T0000018;Name=LINC00685
HG03209_chrY	CAT	exon	126441	126844	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000018;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03209_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	126845	127500	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000018;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG03209_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	127501	128611	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000018;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03209_ch_T0000018:1;Name=LINC00685;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	126441	128611	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000019;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03209_ch_T0000019;Name=LINC00685
HG03209_chrY	CAT	exon	126441	128611	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000019;gene_id=HG03209_ch_G0000004;Parent=HG03209_ch_T0000019;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03209_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	146179	200053	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;gene_id=HG03209_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000005;Name=PPP2R3B
HG03209_chrY	CAT	transcript	146179	189303	100	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000020;Name=PPP2R3B
HG03209_chrY	CAT	exon	146179	146763	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	146763	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	146764	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172536	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	186625	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	186626	189303	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	186626	186865	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	186863	186865	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000020;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146179	200053	100	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000021;Name=PPP2R3B
HG03209_chrY	CAT	exon	146179	146763	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	146763	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	146764	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172536	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	199513	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	199514	200053	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	199514	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	199835	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000021;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146484	176376	100	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000022;Name=PPP2R3B
HG03209_chrY	CAT	exon	146484	147309	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	147309	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	147310	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	172375	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	173200	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	173201	173278	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	173279	175820	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	175821	176376	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000022;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000022:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146484	189303	100	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000023;Name=PPP2R3B
HG03209_chrY	CAT	exon	146484	147309	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	147309	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	147310	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172536	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	186625	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	186626	189303	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	186626	186865	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	186863	186865	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000023;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146484	200053	100	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000024;Name=PPP2R3B
HG03209_chrY	CAT	exon	146484	147309	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	147309	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	147310	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172536	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	199513	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	199514	200053	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	199514	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	199835	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000024;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146484	200053	100	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000025;Name=PPP2R3B
HG03209_chrY	CAT	exon	146484	147309	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	147309	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	147310	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	172375	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	173200	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	173201	173278	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	173279	199513	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	199514	200053	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000025;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000025:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	146484	200053	100	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000026;Name=PPP2R3B
HG03209_chrY	CAT	exon	146484	147309	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	146613	147309	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	146613	146615	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	147310	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	172375	172377	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	173200	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	173201	173278	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	173279	198187	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	198188	198251	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	198252	199513	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	199514	200053	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000026;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000026:14;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	147204	200053	100	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03209_ch_T0000027;Name=PPP2R3B
HG03209_chrY	CAT	exon	147204	148244	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	148124	148244	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	148124	148126	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03209_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	148245	150867	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	150868	150974	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	150868	150974	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	150975	151041	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	151042	151160	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	151042	151160	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	151161	152531	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	152532	152707	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	152532	152707	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	152708	153046	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153047	153136	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153047	153136	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153137	153623	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	153624	153672	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	153624	153672	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	153673	156202	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156203	156359	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156203	156359	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156360	156885	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	156886	156972	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	156886	156972	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	156973	157412	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157413	157487	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157413	157487	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	157488	157913	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	157914	158016	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	157914	158016	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158017	158269	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	158270	158373	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	158270	158373	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	158374	172350	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	172351	172536	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	172351	172536	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	172537	199513	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03209_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	199514	200053	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03209_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	199514	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03209_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	199835	199837	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000027;gene_id=HG03209_ch_G0000005;Parent=HG03209_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03209_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	241932	284620	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=HG03209_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=HG03209_ch_G0000006;Name=LOC102724521
HG03209_chrY	CAT	transcript	241932	284620	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03209_ch_T0000028;Name=LOC102724521
HG03209_chrY	CAT	exon	241932	242400	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	242401	246895	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	246896	247153	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	247154	248636	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	248637	248751	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	248752	250303	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	250304	250470	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	250471	253406	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	253407	253479	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	253480	253712	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	253713	254017	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	254018	271353	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	271354	271966	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	271967	281415	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	281416	281536	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	281537	282578	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	282579	282777	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	282778	283380	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	283381	284620	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03209_ch_T0000028;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000028:9;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	242176	255416	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03209_ch_T0000029;Name=LOC102724521
HG03209_chrY	CAT	exon	242176	242400	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	242401	246895	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000029:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	246896	247153	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	247154	248636	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000029:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	248637	248751	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	248752	250303	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000029:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	250304	250470	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	250471	253929	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000029:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	253930	254017	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	254018	254731	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03209_ch_T0000029:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	254732	255416	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03209_ch_T0000029;gene_id=HG03209_ch_G0000006;Parent=HG03209_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03209_ch_T0000029:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	455952	490649	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=HG03209_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000007;Name=SHOX
HG03209_chrY	CAT	transcript	455952	490649	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03209_ch_T0000030;Name=SHOX
HG03209_chrY	CAT	exon	455952	456211	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	456212	462234	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	462235	462943	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	462667	462943	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	462667	462669	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03209_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	462944	466385	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	466386	466594	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	466386	466594	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	466595	472456	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	472457	472514	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	472457	472514	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	472515	472634	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	472635	472723	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	472635	472723	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	472724	490022	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	490023	490649	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000030:5;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	490023	490067	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	490065	490067	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000030;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03209_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	462560	482579	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03209_ch_T0000031;Name=SHOX
HG03209_chrY	CAT	exon	462560	462943	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	462667	462943	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	462667	462669	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03209_ch_T0000031;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	462944	466385	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	466386	466594	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	466386	466594	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	466595	472456	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	472457	472514	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	472457	472514	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	472515	472634	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	472635	472723	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	472635	472723	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	472724	476024	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03209_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	476025	482579	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03209_ch_T0000031:4;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	476025	476270	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03209_ch_T0000031:4;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	476268	476270	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000031;gene_id=HG03209_ch_G0000007;Parent=HG03209_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03209_ch_T0000031;Name=SHOX;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1029942	1051809	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG03209_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000008;Name=CRLF2
HG03209_chrY	CAT	transcript	1029942	1051809	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03209_ch_T0000032;Name=CRLF2
HG03209_chrY	CAT	exon	1029942	1030612	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1030349	1030612	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1030349	1030351	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03209_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1030613	1032657	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1032658	1032742	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1032658	1032742	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1032743	1036226	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1036227	1036347	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1036227	1036347	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1036348	1038012	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1038013	1038175	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1038013	1038175	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1038176	1041852	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1041853	1041986	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1041853	1041986	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1041987	1045906	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1045907	1046073	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1045907	1045919	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1045917	1045919	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03209_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1046074	1051715	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1051716	1051809	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000032;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000032:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1029942	1051809	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03209_ch_T0000033;Name=CRLF2
HG03209_chrY	CAT	exon	1029942	1030612	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1030349	1030612	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1030349	1030351	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03209_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1030613	1032657	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1032658	1032742	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1032658	1032742	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1032743	1036226	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1036227	1036347	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1036227	1036347	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1036348	1038012	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1038013	1038175	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1038013	1038175	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1038176	1041852	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1041853	1041986	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1041853	1041986	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1041987	1045906	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1045907	1046073	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1045907	1046073	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1046074	1048276	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1048277	1048379	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1048277	1048379	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1048380	1051715	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1051716	1051809	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1051716	1051794	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1051792	1051794	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000033;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03209_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1029942	1051809	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03209_ch_T0000034;Name=CRLF2
HG03209_chrY	CAT	exon	1029942	1030612	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1030349	1030612	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1030349	1030351	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03209_ch_T0000034;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1030613	1032657	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1032658	1032742	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1032658	1032742	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1032743	1036226	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1036227	1036347	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1036227	1036347	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1036348	1038012	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1038013	1038175	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1038013	1038175	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1038176	1041852	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1041853	1041986	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1041853	1041986	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1041987	1045906	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1045907	1046073	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1045907	1046073	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1046074	1048276	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1048277	1048376	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1048277	1048376	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1048377	1051715	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03209_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1051716	1051809	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03209_ch_T0000034:7;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1051716	1051794	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03209_ch_T0000034:7;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1051792	1051794	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000034;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03209_ch_T0000034;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1029942	1051809	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG03209_ch_T0000035;Name=CRLF2
HG03209_chrY	CAT	exon	1029942	1030612	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1030613	1032657	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:0;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1032658	1032742	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1032743	1036226	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:1;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1036227	1036347	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1036348	1038251	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:2;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1038252	1038596	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1038597	1041852	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:3;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1041853	1041986	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1041987	1045906	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:4;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1045907	1046073	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1046074	1048276	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:5;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1048277	1048376	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1048377	1051715	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03209_ch_T0000035:6;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1051716	1051809	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000035;gene_id=HG03209_ch_G0000008;Parent=HG03209_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03209_ch_T0000035:7;Name=CRLF2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1107957	1168802	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG03209_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000009;Name=CSF2RA
HG03209_chrY	CAT	transcript	1107957	1149332	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000036;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1149018	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1149019	1149332	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1149019	1149126	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1149124	1149126	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000036;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000037;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146311	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146312	1146413	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146312	1146413	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1146414	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000037;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000038;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146311	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146312	1146413	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146312	1146413	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1146414	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000038:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000038;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000039;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000039;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000040;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115744	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115745	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000040;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000041;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000041;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000042;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136299	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136300	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136300	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1142060	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1142061	1142123	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1142061	1142123	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1142124	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000042;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000043;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1111798	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1111799	1111920	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1111921	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000043;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000044;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000044;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000045;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000045;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000046;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000046;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1149332	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000047;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1149018	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1149019	1149332	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1149019	1149126	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1149124	1149126	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000047;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000048;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000048:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000048;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166248	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000049;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166047	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166048	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166048	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166248	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166171	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166169	1166171	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000049;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166425	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000050;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166425	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000050:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166293	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166291	1166293	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000050;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166425	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000051;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166425	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000051:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166293	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166291	1166293	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000051;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166425	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000052;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166425	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000052:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166293	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166291	1166293	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000052;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000053;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166047	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166048	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166048	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166090	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000053;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000054;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166070	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166068	1166070	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000054;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000055;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166070	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166068	1166070	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000055;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000056;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166047	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166048	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166048	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166090	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000056;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000057;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000057;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000058;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153219	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153217	1153219	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000058;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000059;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166047	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166048	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000059:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166048	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166090	1166092	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000059;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1166707	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000060;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166047	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166048	1166707	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000060;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1168802	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000061;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1155895	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1155896	1156002	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1155896	1155964	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1155962	1155964	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1156003	1168611	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1168612	1168802	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000061;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000061:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1168802	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000062;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1168611	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1168612	1168802	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1168612	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1168645	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000062;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1168802	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000063;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1168611	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1168612	1168802	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000063:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1168612	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1168645	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000063;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1168802	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000064;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1168611	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1168612	1168802	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000064;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1168802	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000065;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1168611	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1168612	1168802	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000065:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1168612	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1168645	1168647	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000065;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000066;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000066:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000066;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000066:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000067;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148892	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1148890	1148892	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000067;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000067:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000068;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1123820	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1123821	1123972	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1123973	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000068:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000068;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000069;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115798	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115799	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146311	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146312	1146413	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146312	1146413	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1146414	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000069:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000069;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000070;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130675	1130748	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1130675	1130677	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1153032	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1153107	1153109	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000070;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1107957	1153565	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG03209_ch_T0000071;Name=CSF2RA
HG03209_chrY	CAT	exon	1107957	1108022	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1108023	1115734	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1115735	1115822	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1115823	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1153031	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1153032	1153565	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000071;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1123648	1166425	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000072;Name=CSF2RA
HG03209_chrY	CAT	exon	1123648	1123972	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1123973	1124089	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1124090	1124191	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1124116	1124191	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1124116	1124118	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124192	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127640	1127782	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166425	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166293	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166291	1166293	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000072;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1124215	1166429	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03209_ch_T0000073;Name=CSF2RA
HG03209_chrY	CAT	exon	1124215	1124454	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1124455	1127639	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1127640	1127782	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1127696	1127782	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1127696	1127698	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03209_ch_T0000073;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1127783	1130378	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130379	1130502	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130379	1130502	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130503	1130618	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1130619	1130748	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1130619	1130748	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1130749	1132196	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1132197	1132369	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1132197	1132369	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1132370	1136280	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1136281	1136414	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1136281	1136414	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1136415	1137811	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1137812	1137841	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1137812	1137841	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1137842	1143543	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1143544	1143679	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1143544	1143679	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1143680	1146973	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1146974	1147070	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1146974	1147070	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1147071	1148836	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1148837	1148918	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1148837	1148918	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1148919	1166043	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166044	1166066	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166044	1166066	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1166067	1166154	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03209_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1166155	1166429	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03209_ch_T0000073:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1166155	1166293	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03209_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1166291	1166293	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000073;gene_id=HG03209_ch_G0000009;Parent=HG03209_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03209_ch_T0000073;Name=CSF2RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1135410	1135862	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=HG03209_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=HG03209_ch_G0000010;Name=LOC124905238
HG03209_chrY	CAT	transcript	1135410	1135862	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000074;gene_id=HG03209_ch_G0000010;Parent=HG03209_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG03209_ch_T0000074;Name=LOC124905238
HG03209_chrY	CAT	exon	1135410	1135446	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000074;gene_id=HG03209_ch_G0000010;Parent=HG03209_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03209_ch_T0000074:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1135447	1135706	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000074;gene_id=HG03209_ch_G0000010;Parent=HG03209_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG03209_ch_T0000074:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1135707	1135862	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000074;gene_id=HG03209_ch_G0000010;Parent=HG03209_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03209_ch_T0000074:1;Name=LOC124905238;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1135479	1135510	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG03209_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03209_ch_G0000011;Name=MIR3690
HG03209_chrY	CAT	transcript	1135479	1135553	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03209_ch_T0000075;gene_id=HG03209_ch_G0000011;Parent=HG03209_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03209_ch_T0000075;Name=MIR3690
HG03209_chrY	CAT	exon	1135479	1135553	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03209_ch_T0000075;gene_id=HG03209_ch_G0000011;Parent=HG03209_ch_T0000075;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03209_ch_T0000075:0;Name=MIR3690;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1135488	1135510	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03209_ch_T0000076;gene_id=HG03209_ch_G0000011;Parent=HG03209_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03209_ch_T0000076;Name=MIR3690
HG03209_chrY	CAT	exon	1135488	1135510	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03209_ch_T0000076;gene_id=HG03209_ch_G0000011;Parent=HG03209_ch_T0000076;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03209_ch_T0000076:0;Name=MIR3690;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1135782	1135813	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=HG03209_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03209_ch_G0000012;Name=MIR3690
HG03209_chrY	CAT	transcript	1135782	1135856	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG03209_ch_T0000077;gene_id=HG03209_ch_G0000012;Parent=HG03209_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03209_ch_T0000077;Name=MIR3690
HG03209_chrY	CAT	exon	1135782	1135856	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG03209_ch_T0000077;gene_id=HG03209_ch_G0000012;Parent=HG03209_ch_T0000077;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03209_ch_T0000077:0;Name=MIR3690;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1135791	1135813	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG03209_ch_T0000078;gene_id=HG03209_ch_G0000012;Parent=HG03209_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03209_ch_T0000078;Name=MIR3690
HG03209_chrY	CAT	exon	1135791	1135813	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG03209_ch_T0000078;gene_id=HG03209_ch_G0000012;Parent=HG03209_ch_T0000078;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03209_ch_T0000078:0;Name=MIR3690;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1186682	1225971	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG03209_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000013;Name=IL3RA
HG03209_chrY	CAT	transcript	1186682	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000079;Name=IL3RA
HG03209_chrY	CAT	exon	1186682	1186823	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1186824	1191624	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191625	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191663	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191663	1191665	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202233	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202234	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202234	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000079:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000079;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1186682	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000080;Name=IL3RA
HG03209_chrY	CAT	exon	1186682	1186823	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1186824	1191624	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191625	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191663	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191663	1191665	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202233	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202234	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202234	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000080:11;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000080;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1186682	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000081;Name=IL3RA
HG03209_chrY	CAT	exon	1186682	1186823	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1186824	1191627	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191628	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191663	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191663	1191665	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202233	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202234	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202234	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000081:11;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000081;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1186682	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000082;Name=IL3RA
HG03209_chrY	CAT	exon	1186682	1186823	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1186824	1191624	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191625	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191663	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191663	1191665	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202236	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202237	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202237	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000082:11;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000082;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1186682	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000083;Name=IL3RA
HG03209_chrY	CAT	exon	1186682	1186823	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1186824	1191627	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191628	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191663	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191663	1191665	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202236	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202237	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202237	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000083:11;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000083;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1191479	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000085;Name=IL3RA
HG03209_chrY	CAT	exon	1191479	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191483	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191483	1191485	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202233	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202234	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202234	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000085;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1191479	1225971	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03209_ch_T0000086;Name=IL3RA
HG03209_chrY	CAT	exon	1191479	1191726	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1191483	1191726	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1191483	1191485	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03209_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191727	1195209	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1195210	1195328	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1195210	1195328	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1195329	1198325	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1198326	1198440	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1198326	1198440	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1198441	1202011	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202012	1202144	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202012	1202144	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202145	1202236	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202237	1202418	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1202237	1202418	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202419	1206071	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1206072	1206187	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1206072	1206187	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1206188	1208704	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1208705	1208731	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1208705	1208731	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1208732	1215044	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215045	1215159	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1215045	1215159	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215160	1221878	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221879	1221984	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1221879	1221984	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1221985	1224262	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1224263	1224344	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1224263	1224344	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1224345	1225671	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03209_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1225672	1225971	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03209_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1225672	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03209_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1225744	1225746	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000086;gene_id=HG03209_ch_G0000013;Parent=HG03209_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03209_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1187471	1221696	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;alternative_source_transcripts=hg002_chrY_paternal_21.11;gene_id=HG03209_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap;ID=HG03209_ch_G0000014;Name=LOC101928032
HG03209_chrY	CAT	transcript	1187471	1221696	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03209_ch_T0000084;Name=LOC101928032
HG03209_chrY	CAT	exon	1187471	1188686	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1188687	1191494	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1191495	1191710	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1191711	1202221	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202222	1202630	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202631	1205422	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1205423	1205991	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1205992	1211274	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1211275	1211653	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1211654	1215009	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215010	1215078	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215079	1217693	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1217694	1217828	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1217829	1221541	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221542	1221696	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.804;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000084;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1200678	1221696	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03209_ch_T0000087;Name=LOC101928032
HG03209_chrY	CAT	exon	1200678	1200764	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1200765	1202221	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1202222	1202630	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1202631	1205422	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1205423	1205991	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1205992	1215009	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1215010	1215078	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1215079	1217693	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1217694	1217828	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1217829	1221541	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03209_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1221542	1221696	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000087;gene_id=HG03209_ch_G0000014;Parent=HG03209_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03209_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1229424	1235505	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG03209_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000015;Name=SLC25A6
HG03209_chrY	CAT	transcript	1229424	1235505	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG03209_ch_T0000088;Name=SLC25A6
HG03209_chrY	CAT	exon	1229424	1230031	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03209_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1229874	1230031	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03209_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1229874	1229876	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG03209_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1230032	1230550	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03209_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1230551	1230691	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03209_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1230551	1230691	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03209_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1230692	1232512	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03209_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1232513	1232999	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03209_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1232513	1232999	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03209_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1233000	1235290	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03209_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1235291	1235505	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03209_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1235291	1235401	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03209_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1235399	1235401	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000088;gene_id=HG03209_ch_G0000015;Parent=HG03209_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG03209_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1235385	1240334	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG03209_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000016;Name=LOC105373102
HG03209_chrY	CAT	transcript	1235385	1240334	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG03209_ch_T0000089;Name=LOC105373102
HG03209_chrY	CAT	exon	1235385	1235733	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1235385	1235733	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03209_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1235385	1235387	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG03209_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1235734	1238582	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03209_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1238583	1239001	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1238583	1239001	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03209_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1239002	1239824	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03209_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1239825	1240334	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1239825	1239845	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03209_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1239843	1239845	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000089;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG03209_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1235385	1240334	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG03209_ch_T0000090;Name=LOC105373102
HG03209_chrY	CAT	exon	1235385	1235733	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1235734	1238582	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03209_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1238583	1239001	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1239002	1239824	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03209_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1239825	1239968	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1239969	1240062	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03209_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1240063	1240334	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000090;gene_id=HG03209_ch_G0000016;Parent=HG03209_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03209_ch_T0000090:3;Name=LOC105373102;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1240478	1242865	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG03209_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG03209_ch_G0000017;Name=LINC00106
HG03209_chrY	CAT	transcript	1240478	1242865	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG03209_ch_T0000091;Name=LINC00106
HG03209_chrY	CAT	exon	1240478	1240677	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03209_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1240678	1242277	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03209_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1242278	1242411	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03209_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1242412	1242819	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03209_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1242820	1242865	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03209_ch_T0000091;gene_id=HG03209_ch_G0000017;Parent=HG03209_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03209_ch_T0000091:2;Name=LINC00106;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1243980	1257261	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG03209_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG03209_ch_G0000018;Name=ASMTL-AS1
HG03209_chrY	CAT	transcript	1243980	1255404	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03209_ch_T0000092;Name=ASMTL-AS1
HG03209_chrY	CAT	exon	1243980	1244035	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1244036	1244910	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1244911	1245674	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1245675	1246831	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1246832	1246956	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246957	1254560	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254561	1255404	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03209_ch_T0000092;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000092:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1243980	1257261	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03209_ch_T0000093;Name=ASMTL-AS1
HG03209_chrY	CAT	exon	1243980	1244035	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1244036	1244910	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1244911	1245674	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1245675	1246831	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1246832	1246956	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246957	1254560	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254561	1254706	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254707	1255579	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1255580	1256128	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1256129	1256560	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03209_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1256561	1257261	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03209_ch_T0000093;gene_id=HG03209_ch_G0000018;Parent=HG03209_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03209_ch_T0000093:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1246510	1295625	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;gene_id=HG03209_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000019;Name=ASMTL
HG03209_chrY	CAT	transcript	1246510	1278274	100	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000094;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277819	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1278116	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1278117	1278274	.	-	.	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1278117	1278140	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1278138	1278140	.	-	0	source_transcript=hg002_chrY_paternal_26.1;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.1,hg002_chrY_paternal_26.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000094;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1281616	100	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000095;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277765	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1277763	1277765	.	-	0	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1281454	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281455	1281616	.	-	.	source_transcript=hg002_chrY_paternal_26.2;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.2,hg002_chrY_paternal_26.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000095;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000095:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1294779	100	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000096;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277819	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284376	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1294617	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1294618	1294779	.	-	.	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1294618	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1294708	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.3;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.3,hg002_chrY_paternal_26.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000096;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1294779	100	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000097;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000097;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277819	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1281157	1281204	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284376	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1294617	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000097:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1294618	1294779	.	-	.	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000097:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1294618	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000097:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1294708	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.4;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.4,hg002_chrY_paternal_26.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000097;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000097;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000097;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1294779	100	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000098;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1281157	1281204	.	-	1	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284306	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1284304	1284306	.	-	0	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1294617	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1294618	1294779	.	-	.	source_transcript=hg002_chrY_paternal_26.5;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.5,hg002_chrY_paternal_26.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000098;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000098:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1295625	100	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000099;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277819	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1281157	1281204	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284295	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1284293	1284295	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1295486	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1295487	1295625	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.6,hg002_chrY_paternal_26.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000099;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000099:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1295625	100	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000100;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1277754	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277755	1277819	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277755	1277819	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277820	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1281157	1281204	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284376	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1294617	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1294618	1294776	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1294618	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1294708	1294710	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1294777	1295486	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000100:12;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1295487	1295625	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.7,hg002_chrY_paternal_26.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000100;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000100:13;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1246510	1295625	100	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03209_ch_T0000101;Name=ASMTL
HG03209_chrY	CAT	exon	1246510	1246860	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1246640	1246860	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1246640	1246642	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03209_ch_T0000101;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1246861	1254549	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:0;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1254550	1254672	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1254550	1254672	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1254673	1259779	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:1;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1259780	1259923	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1259780	1259923	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1259924	1260788	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:2;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1260789	1260921	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1260789	1260921	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1260922	1263464	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:3;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1263465	1263649	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1263465	1263649	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1263650	1267284	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:4;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1267285	1267447	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1267285	1267447	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1267448	1269497	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:5;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1269498	1269885	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1269498	1269885	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1269886	1274059	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:6;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1274060	1274168	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1274060	1274168	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1274169	1277082	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:7;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1277083	1277144	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1277083	1277144	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1277145	1281156	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:8;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1281157	1281204	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1281157	1281204	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1281205	1284244	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:9;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1284245	1284376	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1284245	1284306	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03209_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1284304	1284306	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03209_ch_T0000101;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1284377	1295486	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03209_ch_T0000101:10;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1295487	1295625	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=hg002_chrY_paternal_26.8,hg002_chrY_paternal_26.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000101;gene_id=HG03209_ch_G0000019;Parent=HG03209_ch_T0000101;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03209_ch_T0000101:11;Name=ASMTL;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1304757	1381205	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG03209_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000020;Name=P2RY8
HG03209_chrY	CAT	transcript	1304757	1309890	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03209_ch_T0000102;Name=P2RY8
HG03209_chrY	CAT	exon	1304757	1308754	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1307651	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03209_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1307651	1307653	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03209_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1308728	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03209_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1308755	1309198	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1309199	1309890	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000102;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000102:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1304757	1336751	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03209_ch_T0000103;Name=P2RY8
HG03209_chrY	CAT	exon	1304757	1308754	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1307651	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03209_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1307651	1307653	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03209_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1308728	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03209_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1308755	1336696	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1336697	1336751	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000103;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000103:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1304757	1338411	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03209_ch_T0000104;Name=P2RY8
HG03209_chrY	CAT	exon	1304757	1308754	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1307651	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03209_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1307651	1307653	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03209_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1308728	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03209_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1308755	1337794	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1337795	1338411	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000104;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000104:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1304757	1381205	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03209_ch_T0000105;Name=P2RY8
HG03209_chrY	CAT	exon	1304757	1308754	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1307651	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03209_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1307651	1307653	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03209_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1308728	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03209_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1308755	1380940	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1380941	1381205	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000105;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000105:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1304757	1381205	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03209_ch_T0000106;Name=P2RY8
HG03209_chrY	CAT	exon	1304757	1308754	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1307651	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03209_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1307651	1307653	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03209_ch_T0000106;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1308728	1308730	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03209_ch_T0000106;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1308755	1310669	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000106:0;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1310670	1310838	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000106:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1310839	1380940	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03209_ch_T0000106:1;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1380941	1381205	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000106;gene_id=HG03209_ch_G0000020;Parent=HG03209_ch_T0000106;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03209_ch_T0000106:2;Name=P2RY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1435790	1446585	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG03209_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000021;Name=AKAP17A
HG03209_chrY	CAT	transcript	1435790	1446585	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG03209_ch_T0000107;Name=AKAP17A
HG03209_chrY	CAT	exon	1435790	1435955	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1435956	1437629	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1437630	1438410	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1437649	1438410	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03209_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1437649	1437651	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG03209_ch_T0000107;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1438411	1439541	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1439542	1439690	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1439542	1439690	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03209_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1439691	1443256	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1443257	1443497	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1443257	1443497	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03209_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1443498	1444723	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1444724	1446585	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000107:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1444724	1445659	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03209_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1445657	1445659	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000107;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000107;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG03209_ch_T0000107;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1435790	1446585	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG03209_ch_T0000108;Name=AKAP17A
HG03209_chrY	CAT	exon	1435790	1435955	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1435956	1437629	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000108:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1437630	1438410	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1438411	1439541	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000108:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1439542	1439690	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1439691	1443256	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000108:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1443257	1443497	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1443498	1444202	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000108:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1444203	1444272	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1444273	1444723	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03209_ch_T0000108:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1444724	1446585	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000108;gene_id=HG03209_ch_G0000021;Parent=HG03209_ch_T0000108;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03209_ch_T0000108:5;Name=AKAP17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1439613	1482242	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG03209_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000022;Name=ASMT
HG03209_chrY	CAT	transcript	1439613	1482242	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03209_ch_T0000109;Name=ASMT
HG03209_chrY	CAT	exon	1439613	1439690	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1439691	1458479	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1458480	1458615	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1458547	1458615	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1458547	1458549	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03209_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1458616	1466485	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1466486	1466660	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1466486	1466660	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1466661	1467615	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1467616	1467745	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1467616	1467745	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1467746	1470892	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1470893	1470961	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1470893	1470961	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1470962	1473001	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1473002	1473120	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1473002	1473120	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1473121	1475889	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1475890	1475973	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1475890	1475973	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1475974	1476335	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1476336	1476476	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1476336	1476476	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1476477	1479629	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1479630	1479752	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1479630	1479752	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1479753	1481963	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1481964	1482242	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000109:9;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1481964	1482175	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1482173	1482175	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000109;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03209_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1458406	1482242	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03209_ch_T0000110;Name=ASMT
HG03209_chrY	CAT	exon	1458406	1458615	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1458547	1458615	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1458547	1458549	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03209_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1458616	1466485	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1466486	1466660	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1466486	1466660	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1466661	1467615	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1467616	1467745	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1467616	1467745	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1467746	1470892	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1470893	1470961	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1470893	1470961	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1470962	1473001	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1473002	1473120	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1473002	1473120	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1473121	1475889	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1475890	1475973	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1475890	1475973	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1475974	1476335	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1476336	1476476	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1476336	1476476	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1476477	1479629	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1479630	1479752	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1479630	1479752	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1479753	1481963	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000110:7;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1481964	1482242	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000110:8;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1481964	1482175	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000110:8;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1482173	1482175	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000110;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03209_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1458480	1482242	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03209_ch_T0000111;Name=ASMT
HG03209_chrY	CAT	exon	1458480	1458615	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1458547	1458615	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	1458547	1458549	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03209_ch_T0000111;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1458616	1466485	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:0;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1466486	1466660	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1466486	1466660	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1466661	1467615	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:1;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1467616	1467745	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1467616	1467745	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1467746	1470892	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:2;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1470893	1470961	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1470893	1470961	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1470962	1473001	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:3;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1473002	1473120	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1473002	1473120	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1473121	1479629	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:4;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1479630	1479752	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1479630	1479752	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1479753	1481963	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03209_ch_T0000111:5;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1481964	1482242	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03209_ch_T0000111:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1481964	1482175	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03209_ch_T0000111:6;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1482173	1482175	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000111;gene_id=HG03209_ch_G0000022;Parent=HG03209_ch_T0000111;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03209_ch_T0000111;Name=ASMT;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1567743	1591651	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG03209_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG03209_ch_G0000023;Name=LINC02968
HG03209_chrY	CAT	transcript	1567743	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000112;Name=LINC02968
HG03209_chrY	CAT	exon	1567743	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569281	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569282	1569525	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569526	1579144	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579145	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03209_ch_T0000112;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1567797	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000113;Name=LINC02968
HG03209_chrY	CAT	exon	1567797	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569278	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569279	1569540	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569541	1577595	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1577596	1577691	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1577692	1578947	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1578948	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03209_ch_T0000113;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000113:7;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1567880	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000114;Name=LINC02968
HG03209_chrY	CAT	exon	1567880	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569278	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569279	1569525	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569526	1577595	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1577596	1577691	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1577692	1579144	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579145	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03209_ch_T0000114;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000114:7;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1567880	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000115;Name=LINC02968
HG03209_chrY	CAT	exon	1567880	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569278	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569279	1569525	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569526	1577595	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1577596	1577691	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1577692	1579141	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579142	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03209_ch_T0000115;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000115:7;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1567880	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000116;Name=LINC02968
HG03209_chrY	CAT	exon	1567880	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569281	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569282	1569525	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569526	1577595	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1577596	1577691	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1577692	1579144	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579145	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03209_ch_T0000116;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000116:7;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1567880	1591651	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03209_ch_T0000117;Name=LINC02968
HG03209_chrY	CAT	exon	1567880	1568047	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1568048	1569278	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1569279	1569525	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1569526	1577595	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1577596	1577691	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1577692	1579252	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:2;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579253	1579358	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1579359	1579451	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:3;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1579452	1580236	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1580237	1582953	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:4;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1582954	1583209	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1583210	1586952	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:5;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1586953	1587012	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1587013	1591350	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03209_ch_T0000117:6;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1591351	1591651	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03209_ch_T0000117;gene_id=HG03209_ch_G0000023;Parent=HG03209_ch_T0000117;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03209_ch_T0000117:7;Name=LINC02968;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1605753	1619125	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG03209_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG03209_ch_G0000024;Name=LOC105379413
HG03209_chrY	CAT	transcript	1605753	1619125	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03209_ch_T0000118;Name=LOC105379413
HG03209_chrY	CAT	exon	1605753	1606329	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1606330	1610856	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03209_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1610857	1611070	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1611071	1615996	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03209_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1615997	1619125	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03209_ch_T0000118;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000118:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	1605753	1619125	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03209_ch_T0000119;Name=LOC105379413
HG03209_chrY	CAT	exon	1605753	1606329	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000119:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1606330	1610856	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03209_ch_T0000119:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1610857	1611019	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000119:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1611020	1615996	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03209_ch_T0000119:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1615997	1619125	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03209_ch_T0000119;gene_id=HG03209_ch_G0000024;Parent=HG03209_ch_T0000119;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03209_ch_T0000119:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1711392	1717180	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG03209_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG03209_ch_G0000025;Name=LOC107985677
HG03209_chrY	CAT	transcript	1711392	1717180	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG03209_ch_T0000120;Name=LOC107985677
HG03209_chrY	CAT	exon	1711392	1712450	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1712451	1713429	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03209_ch_T0000120:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1713430	1713543	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1713544	1714032	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03209_ch_T0000120:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1714033	1714159	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1714160	1715491	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03209_ch_T0000120:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1715492	1715806	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1715807	1716206	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03209_ch_T0000120:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1716207	1716467	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1716468	1716841	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03209_ch_T0000120:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1716842	1717180	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03209_ch_T0000120;gene_id=HG03209_ch_G0000025;Parent=HG03209_ch_T0000120;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03209_ch_T0000120:5;Name=LOC107985677;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1867250	2147196	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG03209_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000026;Name=DHRSX
HG03209_chrY	CAT	transcript	1867250	2147196	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG03209_ch_T0000121;Name=DHRSX
HG03209_chrY	CAT	exon	1867250	1868973	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1868785	1868973	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	1868785	1868787	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG03209_ch_T0000121;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1868974	1890866	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:0;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1890867	1891074	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1890867	1891074	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1891075	1914751	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:1;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1914752	1914959	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1914752	1914959	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1914960	1934247	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:2;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1934248	1934349	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	1934248	1934349	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1934350	2055060	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:3;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2055061	2055129	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2055061	2055129	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2055130	2071516	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:4;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2071517	2071624	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2071517	2071624	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2071625	2147036	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03209_ch_T0000121:5;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2147037	2147196	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03209_ch_T0000121:6;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2147037	2147145	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03209_ch_T0000121:6;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2147143	2147145	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000121;gene_id=HG03209_ch_G0000026;Parent=HG03209_ch_T0000121;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG03209_ch_T0000121;Name=DHRSX;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	1969209	1986252	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG03209_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG03209_ch_G0000027;Name=LOC124905239
HG03209_chrY	CAT	transcript	1969209	1986252	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG03209_ch_T0000122;Name=LOC124905239
HG03209_chrY	CAT	exon	1969209	1970483	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03209_ch_T0000122:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1970484	1977983	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03209_ch_T0000122:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1977984	1978110	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03209_ch_T0000122:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	1978111	1986085	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03209_ch_T0000122:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	1986086	1986252	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03209_ch_T0000122;gene_id=HG03209_ch_G0000027;Parent=HG03209_ch_T0000122;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03209_ch_T0000122:2;Name=LOC124905239;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2132655	2147196	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG03209_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000028;Name=ZBED1
HG03209_chrY	CAT	transcript	2132655	2146845	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03209_ch_T0000123;Name=ZBED1
HG03209_chrY	CAT	exon	2132655	2136992	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2134855	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03209_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2134855	2134857	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03209_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2136937	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03209_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2136993	2146530	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03209_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2146531	2146845	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000123;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000123:1;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2132655	2147196	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03209_ch_T0000124;Name=ZBED1
HG03209_chrY	CAT	exon	2132655	2136992	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2134855	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03209_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2134855	2134857	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03209_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2136937	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03209_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2136993	2147036	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03209_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2147037	2147196	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000124;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000124:1;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2132655	2147196	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03209_ch_T0000125;Name=ZBED1
HG03209_chrY	CAT	exon	2132655	2136989	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2134855	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03209_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2134855	2134857	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03209_ch_T0000125;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2136937	2136939	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03209_ch_T0000125;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2136990	2147036	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03209_ch_T0000125:0;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2147037	2147196	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000125;gene_id=HG03209_ch_G0000028;Parent=HG03209_ch_T0000125;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03209_ch_T0000125:1;Name=ZBED1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2212035	2255594	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG03209_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG03209_ch_G0000029;Name=LOC101928092
HG03209_chrY	CAT	transcript	2212035	2220600	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03209_ch_T0000126;Name=LOC101928092
HG03209_chrY	CAT	exon	2212035	2213298	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2213299	2216013	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2216014	2216169	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2216170	2220062	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2220063	2220600	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03209_ch_T0000126;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000126:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2212035	2220600	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03209_ch_T0000127;Name=LOC101928092
HG03209_chrY	CAT	exon	2212035	2213298	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2213299	2216013	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2216014	2216169	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2216170	2220079	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2220080	2220600	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03209_ch_T0000127;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000127:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2212035	2255526	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03209_ch_T0000128;Name=LOC101928092
HG03209_chrY	CAT	exon	2212035	2213298	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2213299	2216013	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2216014	2216169	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2216170	2255459	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2255460	2255526	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03209_ch_T0000128;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000128:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2212035	2255537	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03209_ch_T0000129;Name=LOC101928092
HG03209_chrY	CAT	exon	2212035	2213298	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2213299	2216013	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2216014	2216169	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000129:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2216170	2220062	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000129:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2220063	2220256	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000129:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2220257	2255459	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000129:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2255460	2255537	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03209_ch_T0000129;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000129:3;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2212035	2255594	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03209_ch_T0000130;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03209_ch_T0000130;Name=LOC101928092
HG03209_chrY	CAT	exon	2212035	2213298	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03209_ch_T0000130;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000130:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2213299	2255459	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03209_ch_T0000130;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03209_ch_T0000130:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2255460	2255594	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03209_ch_T0000130;gene_id=HG03209_ch_G0000029;Parent=HG03209_ch_T0000130;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03209_ch_T0000130:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2255545	2255606	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG03209_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG03209_ch_G0000030;Name=MIR6089
HG03209_chrY	CAT	transcript	2255545	2255608	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03209_ch_T0000131;gene_id=HG03209_ch_G0000030;Parent=HG03209_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03209_ch_T0000131;Name=MIR6089
HG03209_chrY	CAT	exon	2255545	2255608	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03209_ch_T0000131;gene_id=HG03209_ch_G0000030;Parent=HG03209_ch_T0000131;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03209_ch_T0000131:0;Name=MIR6089;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2255583	2255606	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03209_ch_T0000132;gene_id=HG03209_ch_G0000030;Parent=HG03209_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03209_ch_T0000132;Name=MIR6089
HG03209_chrY	CAT	exon	2255583	2255606	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03209_ch_T0000132;gene_id=HG03209_ch_G0000030;Parent=HG03209_ch_T0000132;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03209_ch_T0000132:0;Name=MIR6089;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2255619	2304463	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG03209_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG03209_ch_G0000031;Name=CD99P1
HG03209_chrY	CAT	transcript	2255619	2285541	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03209_ch_T0000133;Name=CD99P1
HG03209_chrY	CAT	exon	2255619	2255835	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2255836	2257349	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2257350	2257392	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2257393	2258503	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2258504	2258572	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2258573	2262167	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2262168	2262321	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2262322	2265090	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2265091	2265135	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2265136	2265779	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2265780	2265848	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2265849	2269042	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2269043	2269087	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2269088	2269737	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2269738	2269806	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2269807	2272953	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2272954	2272999	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:8;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2273000	2285185	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000133:8;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2285186	2285541	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03209_ch_T0000133;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000133:9;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2255619	2304463	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03209_ch_T0000134;Name=CD99P1
HG03209_chrY	CAT	exon	2255619	2255835	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:0;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2255836	2257349	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:0;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2257350	2257392	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:1;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2257393	2258503	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:1;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2258504	2258572	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:2;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2258573	2262167	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:2;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2262168	2262321	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:3;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2262322	2265090	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:3;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2265091	2265135	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:4;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2265136	2265779	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:4;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2265780	2265848	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:5;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2265849	2269737	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:5;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2269738	2269806	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:6;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2269807	2272953	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:6;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2272954	2272999	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:7;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2273000	2302260	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03209_ch_T0000134:7;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2302261	2304463	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03209_ch_T0000134;gene_id=HG03209_ch_G0000031;Parent=HG03209_ch_T0000134;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03209_ch_T0000134:8;Name=CD99P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2259345	2261699	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG03209_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG03209_ch_G0000032;Name=LINC00102
HG03209_chrY	CAT	transcript	2259345	2261699	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03209_ch_T0000135;gene_id=HG03209_ch_G0000032;Parent=HG03209_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG03209_ch_T0000135;Name=LINC00102
HG03209_chrY	CAT	exon	2259345	2260050	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03209_ch_T0000135;gene_id=HG03209_ch_G0000032;Parent=HG03209_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03209_ch_T0000135:0;Name=LINC00102;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2260051	2261068	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03209_ch_T0000135;gene_id=HG03209_ch_G0000032;Parent=HG03209_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG03209_ch_T0000135:0;Name=LINC00102;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2261069	2261699	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03209_ch_T0000135;gene_id=HG03209_ch_G0000032;Parent=HG03209_ch_T0000135;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03209_ch_T0000135:1;Name=LINC00102;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2338144	2388187	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG03209_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000033;Name=CD99
HG03209_chrY	CAT	transcript	2338144	2383314	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000136;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2364411	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2364412	2364459	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2364412	2364459	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2364460	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2370116	2370166	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2380233	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2380234	2383314	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2380234	2380241	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2380239	2380241	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000136;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000137;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2370116	2370166	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2385077	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385078	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2385078	2385134	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2387657	2387682	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2387680	2387682	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000137;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000138;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2364411	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2364412	2364459	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2364412	2364459	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2364460	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2370116	2370166	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2385080	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385081	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2385081	2385134	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000138:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2387657	2387682	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000138:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2387680	2387682	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000138;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000139;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2370116	2370166	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2385080	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385081	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2385081	2385134	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2387657	2387682	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2387680	2387682	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000139;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000140;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2364411	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2364412	2364459	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2364412	2364459	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2364460	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2385077	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385078	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2385078	2385134	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2387657	2387682	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2387680	2387682	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000140;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03209_ch_T0000141;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2338210	2338276	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2338210	2338212	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03209_ch_T0000141;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2361227	2361259	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2364411	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2364412	2364459	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2364412	2364459	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2364460	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2366466	2366510	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2367161	2367229	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2369429	2369476	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2370116	2370166	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2373063	2373176	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2385077	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385078	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2385078	2385134	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03209_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03209_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2387657	2387682	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03209_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2387680	2387682	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000141;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000141;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03209_ch_T0000141;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2338144	2388187	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG03209_ch_T0000142;Name=CD99
HG03209_chrY	CAT	exon	2338144	2338276	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2338277	2361226	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2361227	2361259	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2361260	2364411	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2364412	2364459	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2364460	2366465	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2366466	2366510	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2366511	2367160	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2367161	2367229	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2367230	2369428	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2369429	2369476	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2369477	2370115	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2370116	2370166	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2370167	2373062	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2373063	2373176	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2373177	2380233	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2380234	2380251	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2380252	2385080	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2385081	2385134	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2385135	2387656	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03209_ch_T0000142:9;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2387657	2388187	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000142;gene_id=HG03209_ch_G0000033;Parent=HG03209_ch_T0000142;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03209_ch_T0000142:10;Name=CD99;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2399221	2421814	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG03209_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG03209_ch_G0000034;Name=XGY2
HG03209_chrY	CAT	transcript	2399221	2421814	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG03209_ch_T0000143;Name=XGY2
HG03209_chrY	CAT	exon	2399221	2399260	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03209_ch_T0000143:0;Name=XGY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2399261	2417479	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03209_ch_T0000143:0;Name=XGY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2417480	2417521	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03209_ch_T0000143:1;Name=XGY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2417522	2421533	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03209_ch_T0000143:1;Name=XGY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2421534	2421814	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03209_ch_T0000143;gene_id=HG03209_ch_G0000034;Parent=HG03209_ch_T0000143;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03209_ch_T0000143:2;Name=XGY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2433663	2434490	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG03209_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000035;Name=SRY
HG03209_chrY	CAT	transcript	2433663	2434490	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000144;gene_id=HG03209_ch_G0000035;Parent=HG03209_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG03209_ch_T0000144;Name=SRY
HG03209_chrY	CAT	exon	2433663	2434490	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000144;gene_id=HG03209_ch_G0000035;Parent=HG03209_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG03209_ch_T0000144:0;Name=SRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2433797	2434411	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000144;gene_id=HG03209_ch_G0000035;Parent=HG03209_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG03209_ch_T0000144:0;Name=SRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2433797	2433799	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000144;gene_id=HG03209_ch_G0000035;Parent=HG03209_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG03209_ch_T0000144;Name=SRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2434409	2434411	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000144;gene_id=HG03209_ch_G0000035;Parent=HG03209_ch_T0000144;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG03209_ch_T0000144;Name=SRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2488399	2514065	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG03209_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000036;Name=RPS4Y1
HG03209_chrY	CAT	transcript	2488399	2514065	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03209_ch_T0000145;Name=RPS4Y1
HG03209_chrY	CAT	exon	2488399	2488424	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2488422	2488424	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2488422	2488424	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03209_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2488425	2488961	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2488962	2489039	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2488962	2489039	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2489040	2490873	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2490874	2491054	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2490874	2491054	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2491055	2492442	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2492443	2492540	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2492443	2492540	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2492541	2501396	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2501397	2501568	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2501397	2501568	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2501569	2511884	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2511885	2512042	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2511885	2512042	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2512043	2513589	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2513590	2514065	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2513590	2513691	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2513689	2513691	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000145;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03209_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2488399	2514065	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03209_ch_T0000146;Name=RPS4Y1
HG03209_chrY	CAT	exon	2488399	2488770	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2488741	2488770	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2488741	2488743	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03209_ch_T0000146;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2488771	2488961	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2488962	2489039	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2488962	2489039	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2489040	2490873	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2490874	2491054	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2490874	2491054	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2491055	2492442	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2492443	2492540	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2492443	2492540	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2492541	2501396	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2501397	2501568	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2501397	2501568	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2501569	2511884	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2511885	2512042	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2511885	2512042	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2512043	2513589	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03209_ch_T0000146:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2513590	2514065	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03209_ch_T0000146:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2513590	2513691	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03209_ch_T0000146:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2513689	2513691	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000146;gene_id=HG03209_ch_G0000036;Parent=HG03209_ch_T0000146;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03209_ch_T0000146;Name=RPS4Y1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2582530	2629651	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG03209_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000037;Name=ZFY
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000147;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582918	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582919	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608235	2608790	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2608235	2608237	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000147;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000148;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000148;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000149;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000149:7;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000149;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000150;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582918	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582919	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608235	2608790	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2608235	2608237	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000150;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000151;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608235	2608790	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2608235	2608237	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000151;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000152;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582784	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582785	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608235	2608790	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2608235	2608237	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000152;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000153;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582918	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582919	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000153;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000154;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000154;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000155;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608235	2608790	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2608235	2608237	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000155;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000156;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582595	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582596	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000156:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000156;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000157;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582918	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582919	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622303	2622387	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2622303	2622305	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000157;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000158;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582918	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582919	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000158:7;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000158;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2582530	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000159;Name=ZFY
HG03209_chrY	CAT	exon	2582530	2582784	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2582785	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000159:7;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000159;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	2593326	2629651	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03209_ch_T0000160;Name=ZFY
HG03209_chrY	CAT	exon	2593326	2593423	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2593424	2601052	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2601053	2601141	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2601081	2601141	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	2601081	2601083	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03209_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2601142	2608217	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2608218	2608790	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2608218	2608790	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2608791	2622237	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622238	2622387	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622238	2622387	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622388	2622653	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2622654	2622797	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2622654	2622797	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2622798	2623812	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2623813	2623965	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2623813	2623965	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2623966	2625084	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625085	2625225	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625085	2625225	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2625226	2625954	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03209_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2625955	2629651	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03209_ch_T0000160:7;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	2625955	2627138	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03209_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	2627136	2627138	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000160;gene_id=HG03209_ch_G0000037;Parent=HG03209_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03209_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2613963	2649770	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG03209_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG03209_ch_G0000038;Name=ZFY-AS1
HG03209_chrY	CAT	transcript	2613963	2649770	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG03209_ch_T0000161;Name=ZFY-AS1
HG03209_chrY	CAT	exon	2613963	2614082	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03209_ch_T0000161:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2614083	2628982	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03209_ch_T0000161:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2628983	2629072	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03209_ch_T0000161:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2629073	2649456	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03209_ch_T0000161:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2649457	2649770	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03209_ch_T0000161;gene_id=HG03209_ch_G0000038;Parent=HG03209_ch_T0000161;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03209_ch_T0000161:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	2650140	2749416	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG03209_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG03209_ch_G0000039;Name=LINC00278
HG03209_chrY	CAT	transcript	2650140	2749416	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG03209_ch_T0000162;Name=LINC00278
HG03209_chrY	CAT	exon	2650140	2650361	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03209_ch_T0000162:0;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2650362	2726427	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03209_ch_T0000162:0;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2726428	2726485	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03209_ch_T0000162:1;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2726486	2744137	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03209_ch_T0000162:1;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2744138	2744199	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03209_ch_T0000162:2;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	2744200	2749228	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03209_ch_T0000162:2;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	2749229	2749416	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03209_ch_T0000162;gene_id=HG03209_ch_G0000039;Parent=HG03209_ch_T0000162;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03209_ch_T0000162:3;Name=LINC00278;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	3226224	3227198	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG03209_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000040;Name=TGIF2LY
HG03209_chrY	CAT	transcript	3226224	3227198	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG03209_ch_T0000163;Name=TGIF2LY
HG03209_chrY	CAT	exon	3226224	3226284	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03209_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3226285	3226380	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG03209_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3226381	3227198	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03209_ch_T0000163:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	3226402	3226959	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG03209_ch_T0000163:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	3226402	3226404	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG03209_ch_T0000163;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	3226957	3226959	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000163;gene_id=HG03209_ch_G0000040;Parent=HG03209_ch_T0000163;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG03209_ch_T0000163;Name=TGIF2LY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	3447860	3482761	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG03209_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG03209_ch_G0000041;Name=LOC105377227
HG03209_chrY	CAT	transcript	3447860	3458867	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03209_ch_T0000164;Name=LOC105377227
HG03209_chrY	CAT	exon	3447860	3451161	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451162	3451593	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3451594	3451705	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451706	3456777	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3456778	3458867	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03209_ch_T0000164;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000164:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	3447860	3480239	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03209_ch_T0000165;Name=LOC105377227
HG03209_chrY	CAT	exon	3447860	3451161	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451162	3451593	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3451594	3451705	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451706	3456777	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3456778	3456952	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000165:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3456953	3479609	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000165:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3479610	3480239	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03209_ch_T0000165;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000165:3;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	3447860	3482761	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03209_ch_T0000166;Name=LOC105377227
HG03209_chrY	CAT	exon	3447860	3451161	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000166:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451162	3451593	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000166:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3451594	3451705	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000166:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	3451706	3482666	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03209_ch_T0000166:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	3482667	3482761	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03209_ch_T0000166;gene_id=HG03209_ch_G0000041;Parent=HG03209_ch_T0000166;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03209_ch_T0000166:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	4255558	4255596	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG03209_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG03209_ch_G0000042;Name=MIR9985
HG03209_chrY	CAT	transcript	4255558	4255668	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03209_ch_T0000167;gene_id=HG03209_ch_G0000042;Parent=HG03209_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03209_ch_T0000167;Name=MIR9985
HG03209_chrY	CAT	exon	4255558	4255668	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03209_ch_T0000167;gene_id=HG03209_ch_G0000042;Parent=HG03209_ch_T0000167;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03209_ch_T0000167:0;Name=MIR9985;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4255578	4255596	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03209_ch_T0000168;gene_id=HG03209_ch_G0000042;Parent=HG03209_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03209_ch_T0000168;Name=MIR9985
HG03209_chrY	CAT	exon	4255578	4255596	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03209_ch_T0000168;gene_id=HG03209_ch_G0000042;Parent=HG03209_ch_T0000168;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03209_ch_T0000168:0;Name=MIR9985;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	4649788	5392158	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG03209_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000043;Name=PCDH11Y
HG03209_chrY	CAT	transcript	4649788	4755105	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000169;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4680402	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4680403	4680571	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4680572	4681409	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4681410	4681515	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4681516	4682173	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4682174	4682232	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4682201	4682232	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4682201	4682203	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4682233	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706393	4706963	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	4753850	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4753851	4755105	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000169:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4753851	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	4753866	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000169;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4649788	4755105	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000170;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4681409	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4681410	4681515	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4681516	4682173	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4682174	4682232	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4682201	4682232	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4682201	4682203	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4682233	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706393	4706963	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	4753850	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4753851	4755105	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000170:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4753851	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	4753866	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000170;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4649788	5392154	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000171;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706604	4706963	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4706604	4706606	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	5150576	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5150577	5150775	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5150577	5150775	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5150776	5231717	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5231718	5231741	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5231718	5231741	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5231742	5387201	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5387202	5392154	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000171:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5387202	5387872	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	5387870	5387872	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000171;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4649788	5392158	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000172;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4652179	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4652180	4656227	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4656228	4680402	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4680403	4680571	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4680572	4680718	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4680719	4680850	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4680851	4681409	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4681410	4681515	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4681516	4682173	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4682174	4682232	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4682201	4682232	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4682201	4682203	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4682233	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706393	4706963	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	5150576	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5150577	5150775	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5150577	5150775	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5150776	5231717	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5231718	5231741	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5231718	5231741	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5231742	5387201	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000172:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5387202	5392158	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000172:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5387202	5387872	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	5387870	5387872	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000172;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4649788	5392158	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000173;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4680402	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4680403	4680571	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4680572	4680718	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4680719	4680850	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4680851	4681409	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4681410	4681515	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4681516	4682173	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4682174	4682232	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4682201	4682232	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4682201	4682203	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4682233	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706393	4706963	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	5150576	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5150577	5150775	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5150577	5150775	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5150776	5231717	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5231718	5231741	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5231718	5231741	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5231742	5387201	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000173:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5387202	5392158	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000173:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5387202	5387872	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	5387870	5387872	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000173;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4649788	5392158	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000174;Name=PCDH11Y
HG03209_chrY	CAT	exon	4649788	4650097	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4650098	4652179	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4652180	4652250	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4652251	4681409	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4681410	4681515	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4681516	4682173	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4682174	4682232	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4682201	4682232	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4682201	4682203	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4682233	4706392	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4706393	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706393	4706963	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	5150576	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5150577	5150775	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5150577	5150775	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5150776	5231717	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5231718	5231741	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5231718	5231741	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5231742	5387201	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000174:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5387202	5392158	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000174:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5387202	5387872	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000174:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	5387870	5387872	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000174;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4705592	4755105	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000175;Name=PCDH11Y
HG03209_chrY	CAT	exon	4705592	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706328	4706963	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4706328	4706330	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	4753850	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4753851	4755105	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4753851	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	4753866	4753868	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000175;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	4705594	5392158	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03209_ch_T0000176;Name=PCDH11Y
HG03209_chrY	CAT	exon	4705594	4706963	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4706328	4706963	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	4706328	4706330	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03209_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4706964	4747721	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	4747722	4750214	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	4747722	4750214	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	4750215	5150576	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5150577	5150775	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5150577	5150775	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5150776	5231717	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5231718	5231741	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5231718	5231741	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5231742	5387201	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03209_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5387202	5392158	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03209_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	5387202	5387872	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03209_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	5387870	5387872	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000176;gene_id=HG03209_ch_G0000043;Parent=HG03209_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03209_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	5892352	5893516	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=HG03209_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG03209_ch_G0000044;Name=TTTY23
HG03209_chrY	CAT	transcript	5892352	5893516	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_G0000044;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG03209_ch_T0000177;Name=TTTY23
HG03209_chrY	CAT	exon	5892352	5892660	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03209_ch_T0000177:0;Name=TTTY23;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5892661	5893200	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03209_ch_T0000177:0;Name=TTTY23;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5893201	5893346	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03209_ch_T0000177:1;Name=TTTY23;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5893347	5893459	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03209_ch_T0000177:1;Name=TTTY23;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5893460	5893516	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03209_ch_T0000177;gene_id=HG03209_ch_G0000044;Parent=HG03209_ch_T0000177;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03209_ch_T0000177:2;Name=TTTY23;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	5986801	5991011	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG03209_ch_G0000045;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03209_ch_G0000045;Name=LINC00280
HG03209_chrY	CAT	transcript	5986801	5991011	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_G0000045;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG03209_ch_T0000178;Name=LINC00280
HG03209_chrY	CAT	exon	5986801	5987019	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000178:0;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5987020	5988281	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03209_ch_T0000178:0;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5988282	5988424	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000178:1;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5988425	5990925	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03209_ch_T0000178:1;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5990926	5991011	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03209_ch_T0000178;gene_id=HG03209_ch_G0000045;Parent=HG03209_ch_T0000178;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000178:2;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	5991081	5993167	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=HG03209_ch_G0000046;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG03209_ch_G0000046;Name=TTTY22
HG03209_chrY	CAT	transcript	5991081	5993167	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03209_ch_T0000179;gene_id=HG03209_ch_G0000046;Parent=HG03209_ch_G0000046;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG03209_ch_T0000179;Name=TTTY22
HG03209_chrY	CAT	exon	5991081	5991126	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03209_ch_T0000179;gene_id=HG03209_ch_G0000046;Parent=HG03209_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03209_ch_T0000179:0;Name=TTTY22;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5991127	5993012	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03209_ch_T0000179;gene_id=HG03209_ch_G0000046;Parent=HG03209_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03209_ch_T0000179:0;Name=TTTY22;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5993013	5993167	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03209_ch_T0000179;gene_id=HG03209_ch_G0000046;Parent=HG03209_ch_T0000179;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03209_ch_T0000179:1;Name=TTTY22;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	5996221	5999528	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;gene_id=HG03209_ch_G0000047;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG03209_ch_G0000047;Name=LOC107987342
HG03209_chrY	CAT	transcript	5996221	5999528	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_G0000047;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG03209_ch_T0000180;Name=LOC107987342
HG03209_chrY	CAT	exon	5996221	5996369	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03209_ch_T0000180:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5996370	5998900	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03209_ch_T0000180:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5998901	5998973	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03209_ch_T0000180:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	5998974	5999349	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03209_ch_T0000180:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	5999350	5999528	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03209_ch_T0000180;gene_id=HG03209_ch_G0000047;Parent=HG03209_ch_T0000180;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03209_ch_T0000180:2;Name=LOC107987342;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6019999	6041162	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=HG03209_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG03209_ch_G0000048;Name=TTTY1
HG03209_chrY	CAT	transcript	6019999	6041162	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_G0000048;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG03209_ch_T0000181;Name=TTTY1
HG03209_chrY	CAT	exon	6019999	6020273	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03209_ch_T0000181:0;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6020274	6023697	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03209_ch_T0000181:0;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6023698	6023857	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03209_ch_T0000181:1;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6023858	6030720	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03209_ch_T0000181:1;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6030721	6030829	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03209_ch_T0000181:2;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6030830	6033185	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03209_ch_T0000181:2;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6033186	6033323	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03209_ch_T0000181:3;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6033324	6040904	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03209_ch_T0000181:3;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6040905	6041162	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03209_ch_T0000181;gene_id=HG03209_ch_G0000048;Parent=HG03209_ch_T0000181;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03209_ch_T0000181:4;Name=TTTY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6035842	6058042	.	-	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=HG03209_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG03209_ch_G0000049;Name=TTTY2B
HG03209_chrY	CAT	transcript	6035842	6058042	1000	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_G0000049;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG03209_ch_T0000182;Name=TTTY2B
HG03209_chrY	CAT	exon	6035842	6036521	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6036522	6037744	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6037745	6037942	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6037943	6038062	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6038063	6038141	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6038142	6040971	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6040972	6041128	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6041129	6041820	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6041821	6041969	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6041970	6049363	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6049364	6049450	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6049451	6051926	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6051927	6052004	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6052005	6057837	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03209_ch_T0000182:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6057838	6058042	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03209_ch_T0000182;gene_id=HG03209_ch_G0000049;Parent=HG03209_ch_T0000182;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03209_ch_T0000182:7;Name=TTTY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6073034	6076677	.	+	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=HG03209_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG03209_ch_G0000050;Name=TTTY21B
HG03209_chrY	CAT	transcript	6073034	6076677	1000	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03209_ch_T0000183;gene_id=HG03209_ch_G0000050;Parent=HG03209_ch_G0000050;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG03209_ch_T0000183;Name=TTTY21B
HG03209_chrY	CAT	exon	6073034	6073235	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03209_ch_T0000183;gene_id=HG03209_ch_G0000050;Parent=HG03209_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03209_ch_T0000183:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6073236	6076572	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03209_ch_T0000183;gene_id=HG03209_ch_G0000050;Parent=HG03209_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG03209_ch_T0000183:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6076573	6076677	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03209_ch_T0000183;gene_id=HG03209_ch_G0000050;Parent=HG03209_ch_T0000183;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03209_ch_T0000183:1;Name=TTTY21B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6079068	6087506	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=HG03209_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG03209_ch_G0000051;Name=TTTY7
HG03209_chrY	CAT	transcript	6079068	6087506	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_G0000051;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG03209_ch_T0000184;Name=TTTY7
HG03209_chrY	CAT	exon	6079068	6079104	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:0;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6079105	6080045	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:0;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6080046	6080207	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:1;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6080208	6082514	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:1;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6082515	6082589	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:2;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6082590	6083277	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:2;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6083278	6083754	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:3;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6083755	6085671	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:3;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6085672	6085785	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:4;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6085786	6086758	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:4;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6086759	6087014	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:5;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6087015	6087260	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03209_ch_T0000184:5;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6087261	6087506	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03209_ch_T0000184;gene_id=HG03209_ch_G0000051;Parent=HG03209_ch_T0000184;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03209_ch_T0000184:6;Name=TTTY7;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6100627	6103226	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG03209_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG03209_ch_G0000052;Name=TTTY8B
HG03209_chrY	CAT	transcript	6100627	6103226	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_G0000052;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG03209_ch_T0000185;Name=TTTY8B
HG03209_chrY	CAT	exon	6100627	6100816	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03209_ch_T0000185:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6100817	6102408	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03209_ch_T0000185:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6102409	6102613	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03209_ch_T0000185:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6102614	6103090	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03209_ch_T0000185:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6103091	6103226	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03209_ch_T0000185;gene_id=HG03209_ch_G0000052;Parent=HG03209_ch_T0000185;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03209_ch_T0000185:2;Name=TTTY8B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6479771	6525610	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=HG03209_ch_G0000053;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000053;Name=AMELY
HG03209_chrY	CAT	transcript	6479771	6487880	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03209_ch_T0000186;Name=AMELY
HG03209_chrY	CAT	exon	6479771	6479931	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6479926	6479931	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6479926	6479928	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03209_ch_T0000186;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6479932	6481889	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6481890	6482315	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6481890	6482315	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6482316	6482584	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6482585	6482629	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6482585	6482629	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6482630	6482720	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6482721	6482762	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6482721	6482762	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6482763	6483858	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6483859	6483906	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6483859	6483906	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6483907	6486407	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6486408	6486473	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6486408	6486461	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6486459	6486461	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03209_ch_T0000186;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6486474	6487824	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000186:5;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6487825	6487880	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000186;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000186;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000186:6;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6479771	6525610	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03209_ch_T0000187;Name=AMELY
HG03209_chrY	CAT	exon	6479771	6479931	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6479926	6479931	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6479926	6479928	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03209_ch_T0000187;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6479932	6481889	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:0;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6481890	6482315	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6481890	6482315	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6482316	6482584	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:1;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6482585	6482629	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6482585	6482629	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6482630	6483858	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:2;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6483859	6483906	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6483859	6483906	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6483907	6486407	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:3;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6486408	6486473	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6486408	6486461	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03209_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6486459	6486461	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03209_ch_T0000187;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6486474	6487824	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:4;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6487825	6487924	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:5;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6487925	6525530	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03209_ch_T0000187:5;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525531	6525610	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000187;gene_id=HG03209_ch_G0000053;Parent=HG03209_ch_T0000187;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03209_ch_T0000187:6;Name=AMELY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6523723	6719539	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG03209_ch_G0000054;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000054;Name=TBL1Y
HG03209_chrY	CAT	transcript	6523723	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000188;Name=TBL1Y
HG03209_chrY	CAT	exon	6523723	6523961	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6523962	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6609661	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6609662	6609756	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6609757	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6714635	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6714636	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000188:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6714636	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6714819	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000188;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000189;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6609661	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6609662	6609756	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6609757	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6714635	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000189:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6714636	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000189:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6714636	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6714819	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000189;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000190;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6714635	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000190:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6714636	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000190:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6714636	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6714819	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000190;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6705534	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000191;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6609661	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6609662	6609756	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6609757	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6705322	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6705323	6705534	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000191:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6705323	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6705341	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000191;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6705534	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000192;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6609661	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6609662	6609756	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6609757	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6705322	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000192:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6705323	6705534	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000192:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6705323	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6705341	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000192;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6705534	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000193;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6705322	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000193:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6705323	6705534	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000193:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6705323	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6705341	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000193;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6705534	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000194;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6705322	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6705323	6705534	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000194:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6705323	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6705341	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000194;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000195;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6714635	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6714636	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000195:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6714636	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6714819	6714821	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000195;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000196;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6714635	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6714636	6714701	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6714636	6714701	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6714702	6719248	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000196:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6719249	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000196:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6719249	6719257	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6719255	6719257	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000196;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000197;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6525945	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6525946	6526030	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6526031	6592057	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6592058	6592088	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6592089	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701137	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701138	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000197:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701138	6701243	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6701241	6701243	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000197;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6524555	6719539	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000198;Name=TBL1Y
HG03209_chrY	CAT	exon	6524555	6524840	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6524841	6635305	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6635306	6635394	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6635395	6638891	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6638892	6638999	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6638942	6638999	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6638942	6638944	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6639000	6656835	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6656836	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656836	6656981	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701137	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701138	6719539	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000198:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701138	6701243	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6701241	6701243	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000198;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	6656467	6705534	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03209_ch_T0000199;Name=TBL1Y
HG03209_chrY	CAT	exon	6656467	6656981	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6656736	6656981	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	6656736	6656738	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03209_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6656982	6677753	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6677754	6678006	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6677754	6678006	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6678007	6684052	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684053	6684185	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684053	6684185	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684186	6684576	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6684577	6684718	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6684577	6684718	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6684719	6685416	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685417	6685480	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685417	6685480	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685481	6685589	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6685590	6685687	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6685590	6685687	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6685688	6688416	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6688417	6688477	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6688417	6688477	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6688478	6694584	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6694585	6694706	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6694585	6694706	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6694707	6699748	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6699749	6699823	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6699749	6699823	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6699824	6700140	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6700141	6700268	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6700141	6700268	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6700269	6701117	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6701118	6701283	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6701118	6701283	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6701284	6703939	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6703940	6704041	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6703940	6704041	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6704042	6705322	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03209_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6705323	6705534	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03209_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	6705323	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03209_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	6705341	6705343	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000199;gene_id=HG03209_ch_G0000054;Parent=HG03209_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03209_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	6887810	6995380	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG03209_ch_G0000055;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG03209_ch_G0000055;Name=PRKY
HG03209_chrY	CAT	transcript	6887810	6995380	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_G0000055;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG03209_ch_T0000200;Name=PRKY
HG03209_chrY	CAT	exon	6887810	6888316	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:0;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6888317	6917768	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:0;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6917769	6917937	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:1;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6917938	6939737	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:1;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6939738	6940001	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:2;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6940002	6954947	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:2;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6954948	6955067	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:3;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6955068	6969966	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:3;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6969967	6970062	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:4;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6970063	6981187	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:4;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6981188	6981265	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:5;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6981266	6985575	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:5;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6985576	6985722	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:6;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	6985723	6989544	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03209_ch_T0000200:6;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	6989545	6995380	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03209_ch_T0000200;gene_id=HG03209_ch_G0000055;Parent=HG03209_ch_T0000200;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03209_ch_T0000200:7;Name=PRKY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	7072453	7134492	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG03209_ch_G0000056;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG03209_ch_G0000056;Name=LOC107987338
HG03209_chrY	CAT	transcript	7072453	7134492	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_G0000056;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG03209_ch_T0000201;Name=LOC107987338
HG03209_chrY	CAT	exon	7072453	7072566	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03209_ch_T0000201:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7072567	7114887	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03209_ch_T0000201:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7114888	7115046	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03209_ch_T0000201:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7115047	7132837	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03209_ch_T0000201:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7132838	7132946	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03209_ch_T0000201:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7132947	7133976	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03209_ch_T0000201:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7133977	7134492	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03209_ch_T0000201;gene_id=HG03209_ch_G0000056;Parent=HG03209_ch_T0000201;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03209_ch_T0000201:3;Name=LOC107987338;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	7313314	7315205	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG03209_ch_G0000057;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG03209_ch_G0000057;Name=TTTY16
HG03209_chrY	CAT	transcript	7313314	7315205	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03209_ch_T0000202;gene_id=HG03209_ch_G0000057;Parent=HG03209_ch_G0000057;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG03209_ch_T0000202;Name=TTTY16
HG03209_chrY	CAT	exon	7313314	7313444	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03209_ch_T0000202;gene_id=HG03209_ch_G0000057;Parent=HG03209_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03209_ch_T0000202:0;Name=TTTY16;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7313445	7315144	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03209_ch_T0000202;gene_id=HG03209_ch_G0000057;Parent=HG03209_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG03209_ch_T0000202:0;Name=TTTY16;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7315145	7315205	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03209_ch_T0000202;gene_id=HG03209_ch_G0000057;Parent=HG03209_ch_T0000202;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03209_ch_T0000202:1;Name=TTTY16;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	7396724	7427102	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG03209_ch_G0000058;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG03209_ch_G0000058;Name=LOC107987339
HG03209_chrY	CAT	transcript	7396724	7427102	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_G0000058;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG03209_ch_T0000203;Name=LOC107987339
HG03209_chrY	CAT	exon	7396724	7396771	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03209_ch_T0000203:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7396772	7422726	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03209_ch_T0000203:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7422727	7422836	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03209_ch_T0000203:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7422837	7426385	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03209_ch_T0000203:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7426386	7427102	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03209_ch_T0000203;gene_id=HG03209_ch_G0000058;Parent=HG03209_ch_T0000203;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03209_ch_T0000203:2;Name=LOC107987339;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	7421247	7427915	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG03209_ch_G0000059;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG03209_ch_G0000059;Name=TTTY12
HG03209_chrY	CAT	transcript	7421247	7427915	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03209_ch_T0000204;Name=TTTY12
HG03209_chrY	CAT	exon	7421247	7421294	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000204:0;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7421295	7422155	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03209_ch_T0000204:0;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7422156	7422311	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000204:1;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7422312	7427092	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03209_ch_T0000204:1;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7427093	7427915	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03209_ch_T0000204;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000204;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000204:2;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	7421247	7427915	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03209_ch_T0000205;Name=TTTY12
HG03209_chrY	CAT	exon	7421247	7421294	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000205:0;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7421295	7422155	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03209_ch_T0000205:0;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7422156	7422311	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000205:1;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7422312	7422775	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03209_ch_T0000205:1;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7422776	7422857	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000205:2;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7422858	7427092	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03209_ch_T0000205:2;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7427093	7427915	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03209_ch_T0000205;gene_id=HG03209_ch_G0000059;Parent=HG03209_ch_T0000205;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03209_ch_T0000205:3;Name=TTTY12;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	7448047	7476005	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG03209_ch_G0000060;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG03209_ch_G0000060;Name=LOC105377229
HG03209_chrY	CAT	transcript	7448047	7476005	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_G0000060;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG03209_ch_T0000206;Name=LOC105377229
HG03209_chrY	CAT	exon	7448047	7449322	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03209_ch_T0000206:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7449323	7449469	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03209_ch_T0000206:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7449470	7449641	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03209_ch_T0000206:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7449642	7450209	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03209_ch_T0000206:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7450210	7450334	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03209_ch_T0000206:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	7450335	7475936	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03209_ch_T0000206:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	7475937	7476005	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03209_ch_T0000206;gene_id=HG03209_ch_G0000060;Parent=HG03209_ch_T0000206;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03209_ch_T0000206:3;Name=LOC105377229;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8012327	8024594	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG03209_ch_G0000061;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG03209_ch_G0000061;Name=LOC105377231
HG03209_chrY	CAT	transcript	8012327	8024594	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03209_ch_T0000207;Name=LOC105377231
HG03209_chrY	CAT	exon	8012327	8012412	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000207:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8012413	8020006	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000207:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8020007	8020260	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000207:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8020261	8020961	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000207:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8020962	8021114	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000207:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8021115	8024406	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000207:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8024407	8024594	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03209_ch_T0000207;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000207;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000207:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8012327	8024594	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03209_ch_T0000208;Name=LOC105377231
HG03209_chrY	CAT	exon	8012327	8012412	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000208:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8012413	8020006	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000208:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8020007	8020250	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000208:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8020251	8020961	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000208:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8020962	8021114	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000208:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8021115	8024406	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03209_ch_T0000208:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8024407	8024594	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03209_ch_T0000208;gene_id=HG03209_ch_G0000061;Parent=HG03209_ch_T0000208;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03209_ch_T0000208:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8166340	8168551	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG03209_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG03209_ch_G0000062;Name=LOC105377232
HG03209_chrY	CAT	transcript	8166340	8168551	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_G0000062;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG03209_ch_T0000209;Name=LOC105377232
HG03209_chrY	CAT	exon	8166340	8166354	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03209_ch_T0000209:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8166355	8167040	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03209_ch_T0000209:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8167041	8167115	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03209_ch_T0000209:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8167116	8168537	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03209_ch_T0000209:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8168538	8168551	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03209_ch_T0000209;gene_id=HG03209_ch_G0000062;Parent=HG03209_ch_T0000209;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03209_ch_T0000209:2;Name=LOC105377232;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8178041	8179527	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG03209_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG03209_ch_G0000063;Name=LOC107987354
HG03209_chrY	CAT	transcript	8178041	8179527	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_G0000063;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG03209_ch_T0000210;Name=LOC107987354
HG03209_chrY	CAT	exon	8178041	8178199	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03209_ch_T0000210:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8178200	8178350	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03209_ch_T0000210:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8178351	8178425	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03209_ch_T0000210:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8178426	8179389	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03209_ch_T0000210:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8179390	8179527	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03209_ch_T0000210;gene_id=HG03209_ch_G0000063;Parent=HG03209_ch_T0000210;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03209_ch_T0000210:2;Name=LOC107987354;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8255812	8262647	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG03209_ch_G0000064;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG03209_ch_G0000064;Name=LINC00279
HG03209_chrY	CAT	transcript	8255812	8262647	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_G0000064;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG03209_ch_T0000211;Name=LINC00279
HG03209_chrY	CAT	exon	8255812	8255924	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03209_ch_T0000211:0;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8255925	8261649	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03209_ch_T0000211:0;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8261650	8261845	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03209_ch_T0000211:1;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8261846	8262196	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03209_ch_T0000211:1;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8262197	8262439	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03209_ch_T0000211:2;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8262440	8262571	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03209_ch_T0000211:2;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8262572	8262647	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03209_ch_T0000211;gene_id=HG03209_ch_G0000064;Parent=HG03209_ch_T0000211;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03209_ch_T0000211:3;Name=LINC00279;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8277559	8278400	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG03209_ch_G0000065;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG03209_ch_G0000065;Name=LOC107987340
HG03209_chrY	CAT	transcript	8277559	8278400	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03209_ch_T0000212;gene_id=HG03209_ch_G0000065;Parent=HG03209_ch_G0000065;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG03209_ch_T0000212;Name=LOC107987340
HG03209_chrY	CAT	exon	8277559	8277680	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03209_ch_T0000212;gene_id=HG03209_ch_G0000065;Parent=HG03209_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03209_ch_T0000212:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8277681	8278015	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03209_ch_T0000212;gene_id=HG03209_ch_G0000065;Parent=HG03209_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG03209_ch_T0000212:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8278016	8278400	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03209_ch_T0000212;gene_id=HG03209_ch_G0000065;Parent=HG03209_ch_T0000212;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03209_ch_T0000212:1;Name=LOC107987340;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8300888	8301396	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG03209_ch_G0000066;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG03209_ch_G0000066;Name=TTTY18
HG03209_chrY	CAT	transcript	8300888	8301396	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03209_ch_T0000213;gene_id=HG03209_ch_G0000066;Parent=HG03209_ch_G0000066;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG03209_ch_T0000213;Name=TTTY18
HG03209_chrY	CAT	exon	8300888	8300950	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03209_ch_T0000213;gene_id=HG03209_ch_G0000066;Parent=HG03209_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03209_ch_T0000213:0;Name=TTTY18;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8300951	8301238	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03209_ch_T0000213;gene_id=HG03209_ch_G0000066;Parent=HG03209_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG03209_ch_T0000213:0;Name=TTTY18;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8301239	8301396	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03209_ch_T0000213;gene_id=HG03209_ch_G0000066;Parent=HG03209_ch_T0000213;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03209_ch_T0000213:1;Name=TTTY18;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8311415	8312836	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG03209_ch_G0000067;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG03209_ch_G0000067;Name=LOC105377234
HG03209_chrY	CAT	transcript	8311415	8312836	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_G0000067;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG03209_ch_T0000214;Name=LOC105377234
HG03209_chrY	CAT	exon	8311415	8311501	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03209_ch_T0000214:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8311502	8311985	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03209_ch_T0000214:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8311986	8312063	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03209_ch_T0000214:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8312064	8312644	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03209_ch_T0000214:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8312645	8312836	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03209_ch_T0000214;gene_id=HG03209_ch_G0000067;Parent=HG03209_ch_T0000214;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03209_ch_T0000214:2;Name=LOC105377234;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8322010	8322821	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG03209_ch_G0000068;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG03209_ch_G0000068;Name=TTTY19
HG03209_chrY	CAT	transcript	8322010	8322821	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03209_ch_T0000215;gene_id=HG03209_ch_G0000068;Parent=HG03209_ch_G0000068;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG03209_ch_T0000215;Name=TTTY19
HG03209_chrY	CAT	exon	8322010	8322097	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03209_ch_T0000215;gene_id=HG03209_ch_G0000068;Parent=HG03209_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03209_ch_T0000215:0;Name=TTTY19;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8322098	8322640	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03209_ch_T0000215;gene_id=HG03209_ch_G0000068;Parent=HG03209_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG03209_ch_T0000215:0;Name=TTTY19;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8322641	8322821	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03209_ch_T0000215;gene_id=HG03209_ch_G0000068;Parent=HG03209_ch_T0000215;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03209_ch_T0000215:1;Name=TTTY19;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8339344	8341829	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG03209_ch_G0000069;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG03209_ch_G0000069;Name=LOC105377235
HG03209_chrY	CAT	transcript	8339344	8341829	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_G0000069;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG03209_ch_T0000216;Name=LOC105377235
HG03209_chrY	CAT	exon	8339344	8339627	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03209_ch_T0000216:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8339628	8339724	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03209_ch_T0000216:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8339725	8339820	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03209_ch_T0000216:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8339821	8339910	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03209_ch_T0000216:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8339911	8340173	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03209_ch_T0000216:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8340174	8341641	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03209_ch_T0000216:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8341642	8341829	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03209_ch_T0000216;gene_id=HG03209_ch_G0000069;Parent=HG03209_ch_T0000216;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03209_ch_T0000216:3;Name=LOC105377235;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8400858	8434926	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG03209_ch_G0000070;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG03209_ch_G0000070;Name=TTTY11
HG03209_chrY	CAT	transcript	8400858	8434926	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_G0000070;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG03209_ch_T0000217;Name=TTTY11
HG03209_chrY	CAT	exon	8400858	8400951	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03209_ch_T0000217:0;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8400952	8401432	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03209_ch_T0000217:0;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8401433	8401748	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03209_ch_T0000217:1;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8401749	8406544	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03209_ch_T0000217:1;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8406545	8406847	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03209_ch_T0000217:2;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8406848	8412405	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03209_ch_T0000217:2;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8412406	8412489	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03209_ch_T0000217:3;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8412490	8434889	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03209_ch_T0000217:3;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8434890	8434926	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03209_ch_T0000217;gene_id=HG03209_ch_G0000070;Parent=HG03209_ch_T0000217;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03209_ch_T0000217:4;Name=TTTY11;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8832558	8837422	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG03209_ch_G0000071;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG03209_ch_G0000071;Name=LOC105379264
HG03209_chrY	CAT	transcript	8832558	8837422	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_G0000071;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG03209_ch_T0000218;Name=LOC105379264
HG03209_chrY	CAT	exon	8832558	8832632	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03209_ch_T0000218:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8832633	8832786	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03209_ch_T0000218:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8832787	8832891	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03209_ch_T0000218:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8832892	8834953	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03209_ch_T0000218:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8834954	8835029	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03209_ch_T0000218:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8835030	8837338	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03209_ch_T0000218:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8837339	8837422	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03209_ch_T0000218;gene_id=HG03209_ch_G0000071;Parent=HG03209_ch_T0000218;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03209_ch_T0000218:3;Name=LOC105379264;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8842111	8850657	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG03209_ch_G0000072;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG03209_ch_G0000072;Name=LOC105379265
HG03209_chrY	CAT	transcript	8842111	8850657	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_G0000072;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG03209_ch_T0000219;Name=LOC105379265
HG03209_chrY	CAT	exon	8842111	8842666	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03209_ch_T0000219:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8842667	8843774	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03209_ch_T0000219:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8843775	8843916	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03209_ch_T0000219:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8843917	8846060	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03209_ch_T0000219:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8846061	8846147	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03209_ch_T0000219:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8846148	8850528	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03209_ch_T0000219:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8850529	8850657	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03209_ch_T0000219;gene_id=HG03209_ch_G0000072;Parent=HG03209_ch_T0000219;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03209_ch_T0000219:3;Name=LOC105379265;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8856691	8858942	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG03209_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03209_ch_G0000073;Name=LOC105379266
HG03209_chrY	CAT	transcript	8856691	8858942	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000220;gene_id=HG03209_ch_G0000073;Parent=HG03209_ch_G0000073;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG03209_ch_T0000220;Name=LOC105379266
HG03209_chrY	CAT	exon	8856691	8856975	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000220;gene_id=HG03209_ch_G0000073;Parent=HG03209_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03209_ch_T0000220:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8856976	8857660	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000220;gene_id=HG03209_ch_G0000073;Parent=HG03209_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG03209_ch_T0000220:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8857661	8858942	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000220;gene_id=HG03209_ch_G0000073;Parent=HG03209_ch_T0000220;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03209_ch_T0000220:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8860098	8872328	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG03209_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG03209_ch_G0000074;Name=LOC105379267
HG03209_chrY	CAT	transcript	8860098	8872328	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_G0000074;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG03209_ch_T0000221;Name=LOC105379267
HG03209_chrY	CAT	exon	8860098	8860269	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03209_ch_T0000221:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8860270	8861514	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03209_ch_T0000221:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8861515	8861589	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03209_ch_T0000221:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8861590	8872257	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03209_ch_T0000221:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8872258	8872328	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03209_ch_T0000221;gene_id=HG03209_ch_G0000074;Parent=HG03209_ch_T0000221;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03209_ch_T0000221:2;Name=LOC105379267;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8884776	8890589	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG03209_ch_G0000075;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG03209_ch_G0000075;Name=RBMY1A3P
HG03209_chrY	CAT	transcript	8884776	8890589	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_G0000075;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG03209_ch_T0000222;Name=RBMY1A3P
HG03209_chrY	CAT	exon	8884776	8884806	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03209_ch_T0000222:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8884807	8886706	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03209_ch_T0000222:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8886707	8886884	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03209_ch_T0000222:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8886885	8889899	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03209_ch_T0000222:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8889900	8890003	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03209_ch_T0000222:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8890004	8890475	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03209_ch_T0000222:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8890476	8890589	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03209_ch_T0000222;gene_id=HG03209_ch_G0000075;Parent=HG03209_ch_T0000222;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03209_ch_T0000222:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8897595	8902547	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=HG03209_ch_G0000076;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG03209_ch_G0000076;Name=TTTY20
HG03209_chrY	CAT	transcript	8897595	8902547	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03209_ch_T0000223;gene_id=HG03209_ch_G0000076;Parent=HG03209_ch_G0000076;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG03209_ch_T0000223;Name=TTTY20
HG03209_chrY	CAT	exon	8897595	8897771	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03209_ch_T0000223;gene_id=HG03209_ch_G0000076;Parent=HG03209_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03209_ch_T0000223:0;Name=TTTY20;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8897772	8902465	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03209_ch_T0000223;gene_id=HG03209_ch_G0000076;Parent=HG03209_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG03209_ch_T0000223:0;Name=TTTY20;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8902466	8902547	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03209_ch_T0000223;gene_id=HG03209_ch_G0000076;Parent=HG03209_ch_T0000223;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03209_ch_T0000223:1;Name=TTTY20;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8905179	8907975	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG03209_ch_G0000077;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000077;Name=TSPY10
HG03209_chrY	CAT	transcript	8905179	8907975	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03209_ch_T0000224;Name=TSPY10
HG03209_chrY	CAT	exon	8905179	8905710	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8905225	8905710	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8905225	8905227	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000224;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8905711	8906317	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000224:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906318	8906395	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906318	8906395	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906396	8906523	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000224:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906524	8906635	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906524	8906635	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906636	8906736	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000224:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906737	8906882	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906737	8906882	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906883	8906988	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000224:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906989	8907070	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906989	8907070	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8907071	8907764	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000224:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8907765	8907975	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000224:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8907765	8907787	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000224:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8907785	8907787	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03209_ch_T0000224;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000224;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000224;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8905179	8907975	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03209_ch_T0000225;Name=TSPY10
HG03209_chrY	CAT	exon	8905179	8905710	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8905225	8905710	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8905225	8905227	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000225;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8905711	8906317	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000225:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906318	8906395	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906318	8906395	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906396	8906523	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000225:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906524	8906635	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906524	8906635	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906636	8906736	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000225:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906737	8906882	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906737	8906882	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906883	8906977	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000225:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906978	8907070	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906978	8907040	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8907038	8907040	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000225;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8907071	8907764	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000225:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8907765	8907975	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03209_ch_T0000225;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000225;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000225:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8905179	8907975	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03209_ch_T0000226;Name=TSPY10
HG03209_chrY	CAT	exon	8905179	8905710	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8905225	8905710	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8905225	8905227	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000226;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8905711	8906317	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000226:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906318	8906395	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906318	8906395	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906396	8906523	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000226:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906524	8906635	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906524	8906635	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906636	8906743	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000226:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906744	8906882	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906744	8906882	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906883	8906988	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000226:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906989	8907070	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8906989	8907040	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8907038	8907040	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000226;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8907071	8907764	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000226:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8907765	8907975	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03209_ch_T0000226;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000226;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000226:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8905179	8907975	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_G0000077;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=HG03209_ch_T0000227;Name=TSPY10
HG03209_chrY	CAT	exon	8905179	8905710	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8905711	8906317	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000227:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906318	8906395	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906396	8906523	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000227:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906524	8906635	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906636	8906743	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000227:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906744	8906882	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8906883	8906977	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000227:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8906978	8907070	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8907071	8907764	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000227:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8907765	8907975	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03209_ch_T0000227;gene_id=HG03209_ch_G0000077;Parent=HG03209_ch_T0000227;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000227:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8917264	8922872	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_169;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG03209_ch_G0000078;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000078;Name=FAM197Y3
HG03209_chrY	CAT	transcript	8917264	8922872	1000	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_G0000078;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000228;Name=FAM197Y3
HG03209_chrY	CAT	exon	8917264	8917323	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8917324	8920873	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8920874	8921032	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8921033	8922538	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8922539	8922684	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8922685	8922770	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8922771	8922872	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03209_ch_T0000228;gene_id=HG03209_ch_G0000078;Parent=HG03209_ch_T0000228;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000228:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8925487	8928283	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG03209_ch_G0000079;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000079;Name=TSPY8
HG03209_chrY	CAT	transcript	8925487	8928283	100	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03209_ch_T0000229;Name=TSPY8
HG03209_chrY	CAT	exon	8925487	8926018	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8925533	8926018	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8925533	8925535	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03209_ch_T0000229;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926019	8926625	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000229:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926626	8926703	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926626	8926703	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926704	8926831	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000229:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926832	8926943	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926832	8926943	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926944	8927044	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000229:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927045	8927190	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927045	8927190	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927191	8927296	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000229:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927297	8927378	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927297	8927378	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927379	8928072	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000229:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8928073	8928283	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000229:5;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8928073	8928095	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000229:5;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8928093	8928095	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000229;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000229;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03209_ch_T0000229;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8925487	8928283	100	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03209_ch_T0000230;Name=TSPY8
HG03209_chrY	CAT	exon	8925487	8926018	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8925533	8926018	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8925533	8925535	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03209_ch_T0000230;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926019	8926625	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000230:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926626	8926703	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926626	8926703	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926704	8926831	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000230:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926832	8926943	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926832	8926943	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926944	8927044	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000230:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927045	8927190	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927045	8927190	.	+	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927191	8927285	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000230:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927286	8927378	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927286	8927348	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8927346	8927348	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03209_ch_T0000230;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927379	8928072	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000230:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8928073	8928283	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000230;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000230;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000230:5;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8925487	8928283	100	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03209_ch_T0000231;Name=TSPY8
HG03209_chrY	CAT	exon	8925487	8926018	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8925533	8926018	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8925533	8925535	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03209_ch_T0000231;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926019	8926625	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000231:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926626	8926703	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926626	8926703	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926704	8926831	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000231:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926832	8926943	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8926832	8926943	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926944	8927051	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000231:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927052	8927190	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927052	8927190	.	+	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927191	8927296	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000231:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927297	8927378	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8927297	8927348	.	+	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03209_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8927346	8927348	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03209_ch_T0000231;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927379	8928072	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03209_ch_T0000231:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8928073	8928283	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000231;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000231;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03209_ch_T0000231:5;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8925487	8928283	1000	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_G0000079;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG03209_ch_T0000232;Name=TSPY8
HG03209_chrY	CAT	exon	8925487	8926018	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926019	8926625	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03209_ch_T0000232:0;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926626	8926703	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926704	8926831	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03209_ch_T0000232:1;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8926832	8926943	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8926944	8927051	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03209_ch_T0000232:2;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927052	8927190	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927191	8927285	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03209_ch_T0000232:3;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8927286	8927378	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8927379	8928072	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03209_ch_T0000232:4;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8928073	8928283	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000232;gene_id=HG03209_ch_G0000079;Parent=HG03209_ch_T0000232;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03209_ch_T0000232:5;Name=TSPY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8937593	8943194	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=HG03209_ch_G0000080;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000080;Name=FAM197Y3
HG03209_chrY	CAT	transcript	8937593	8943194	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_G0000080;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000233;Name=FAM197Y3
HG03209_chrY	CAT	exon	8937593	8937652	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000233:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8937653	8941203	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000233:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8941204	8941362	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000233:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8941363	8942860	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000233:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8942861	8943006	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000233:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8943007	8943092	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000233:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8943093	8943194	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03209_ch_T0000233;gene_id=HG03209_ch_G0000080;Parent=HG03209_ch_T0000233;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000233:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8945808	8948622	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_174;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=HG03209_ch_G0000081;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03209_ch_G0000081;Name=TSPY4
HG03209_chrY	CAT	transcript	8945808	8948622	100	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_G0000081;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03209_ch_T0000234;Name=TSPY4
HG03209_chrY	CAT	exon	8945808	8946357	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8945854	8946357	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8945854	8945856	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8946358	8946964	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8946965	8947042	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8946965	8947042	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947043	8947170	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947171	8947282	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947171	8947282	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947283	8947383	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947384	8947529	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947384	8947529	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947530	8947635	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947636	8947717	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947636	8947717	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947718	8948411	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8948412	8948622	.	+	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8948412	8948434	.	+	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8948432	8948434	.	+	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03209_ch_T0000234;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000234;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8945808	8948622	100	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_G0000081;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03209_ch_T0000235;Name=TSPY4
HG03209_chrY	CAT	exon	8945808	8946357	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8945854	8946357	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8945854	8945856	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8946358	8946964	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8946965	8947042	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8946965	8947042	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947043	8947170	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947171	8947282	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947171	8947282	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947283	8947383	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947384	8947529	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947384	8947529	.	+	2	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947530	8947624	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947625	8947717	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947625	8947687	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8947685	8947687	.	+	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947718	8948411	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8948412	8948622	.	+	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03209_ch_T0000235;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000235;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000235:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8945808	8948622	100	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_G0000081;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG03209_ch_T0000236;Name=TSPY4
HG03209_chrY	CAT	exon	8945808	8946357	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8945854	8946357	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8945854	8945856	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8946358	8946964	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8946965	8947042	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8946965	8947042	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947043	8947170	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947171	8947282	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947171	8947282	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947283	8947390	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947391	8947529	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947391	8947529	.	+	2	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947530	8947635	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947636	8947717	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8947636	8947687	.	+	1	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8947685	8947687	.	+	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947718	8948411	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8948412	8948622	.	+	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03209_ch_T0000236;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000236;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000236:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8945808	8948622	1000	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_G0000081;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=HG03209_ch_T0000237;Name=TSPY4
HG03209_chrY	CAT	exon	8945808	8946357	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8946358	8946964	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8946965	8947042	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947043	8947170	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947171	8947282	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947283	8947390	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947391	8947529	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947530	8947624	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8947625	8947717	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8947718	8948411	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8948412	8948622	.	+	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03209_ch_T0000237;gene_id=HG03209_ch_G0000081;Parent=HG03209_ch_T0000237;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000237:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8957892	8963576	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;gene_id=HG03209_ch_G0000082;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000082;Name=FAM197Y2
HG03209_chrY	CAT	transcript	8957892	8963576	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_G0000082;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000238;Name=FAM197Y2
HG03209_chrY	CAT	exon	8957892	8957951	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000238:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8957952	8961501	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000238:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8961502	8961660	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000238:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8961661	8963153	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000238:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8963154	8963299	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000238:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8963300	8963385	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000238:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8963386	8963576	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03209_ch_T0000238;gene_id=HG03209_ch_G0000082;Parent=HG03209_ch_T0000238;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000238:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8966101	8968897	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;gene_id=HG03209_ch_G0000083;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000083;Name=TSPY1
HG03209_chrY	CAT	transcript	8966101	8968897	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03209_ch_T0000239;Name=TSPY1
HG03209_chrY	CAT	exon	8966101	8966632	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8966147	8966632	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8966147	8966149	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966633	8967239	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000239:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967240	8967317	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967240	8967317	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967318	8967445	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000239:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967446	8967557	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967446	8967557	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967558	8967658	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000239:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967659	8967804	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967659	8967804	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967805	8967899	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000239:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967900	8967992	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967900	8967962	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8967960	8967962	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000239;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967993	8968686	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000239:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8968687	8968897	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000239;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000239;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000239:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8966101	8968897	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03209_ch_T0000240;Name=TSPY1
HG03209_chrY	CAT	exon	8966101	8966233	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8966147	8966233	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8966147	8966149	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000240;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966234	8966494	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8966495	8966632	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8966495	8966632	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966633	8967239	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967240	8967317	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967240	8967317	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967318	8967445	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967446	8967557	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967446	8967557	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967558	8967658	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967659	8967804	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967659	8967804	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967805	8967910	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967911	8967992	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967911	8967992	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967993	8968686	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000240:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8968687	8968897	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000240:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8968687	8968709	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000240:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8968707	8968709	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000240;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000240;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000240;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8966101	8968897	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03209_ch_T0000241;Name=TSPY1
HG03209_chrY	CAT	exon	8966101	8966632	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8966147	8966632	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8966147	8966149	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966633	8967239	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967240	8967317	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967240	8967317	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967318	8967445	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967446	8967557	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967446	8967557	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967558	8967658	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967659	8967804	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967659	8967804	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967805	8967910	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967911	8967992	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967911	8967992	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967993	8968686	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8968687	8968897	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8968687	8968709	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8968707	8968709	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000241;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8966101	8968897	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03209_ch_T0000242;Name=TSPY1
HG03209_chrY	CAT	exon	8966101	8966632	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8966147	8966632	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8966147	8966149	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966633	8967239	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967240	8967317	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967240	8967317	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967318	8967445	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967446	8967557	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967446	8967557	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967558	8967665	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967666	8967804	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967666	8967804	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967805	8967910	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967911	8967992	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8967911	8967962	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8967960	8967962	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967993	8968686	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8968687	8968897	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000242;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000242;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000242:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8966101	8968897	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_G0000083;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG03209_ch_T0000243;Name=TSPY1
HG03209_chrY	CAT	exon	8966101	8966632	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8966633	8967239	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967240	8967317	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967318	8967445	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967446	8967557	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967558	8967665	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967666	8967804	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967805	8967899	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8967900	8967992	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8967993	8968686	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8968687	8968897	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000243;gene_id=HG03209_ch_G0000083;Parent=HG03209_ch_T0000243;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000243:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8978188	8983886	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;gene_id=HG03209_ch_G0000084;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000084;Name=FAM197Y2
HG03209_chrY	CAT	transcript	8978188	8983886	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_G0000084;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000244;Name=FAM197Y2
HG03209_chrY	CAT	exon	8978188	8978247	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000244:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8978248	8981796	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000244:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8981797	8981955	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000244:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8981956	8983463	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000244:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8983464	8983609	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000244:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8983610	8983695	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000244:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8983696	8983886	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03209_ch_T0000244;gene_id=HG03209_ch_G0000084;Parent=HG03209_ch_T0000244;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000244:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8986410	8989224	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_160;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;gene_id=HG03209_ch_G0000085;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000085;Name=TSPY4
HG03209_chrY	CAT	transcript	8986410	8989224	100	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03209_ch_T0000245;Name=TSPY4
HG03209_chrY	CAT	exon	8986410	8986959	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8986456	8986959	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8986456	8986458	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000245;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8986960	8987566	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000245:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987567	8987644	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987567	8987644	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987645	8987772	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000245:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987773	8987884	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987773	8987884	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987885	8987985	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000245:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987986	8988131	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987986	8988131	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988132	8988237	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000245:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8988238	8988319	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8988238	8988319	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988320	8989013	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000245:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8989014	8989224	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000245:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8989014	8989036	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000245:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8989034	8989036	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000245;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000245;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000245;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8986410	8989224	100	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03209_ch_T0000246;Name=TSPY4
HG03209_chrY	CAT	exon	8986410	8986959	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8986456	8986959	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000246:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8986456	8986458	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000246;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8986960	8987566	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000246:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987567	8987644	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987567	8987644	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000246:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987645	8987772	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000246:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987773	8987884	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987773	8987884	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000246:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987885	8987985	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000246:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987986	8988131	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987986	8988131	.	+	2	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000246:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988132	8988226	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000246:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8988227	8988319	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8988227	8988289	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000246:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8988287	8988289	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000246;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988320	8989013	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000246:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8989014	8989224	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000246;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000246;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000246:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8986410	8989224	100	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03209_ch_T0000247;Name=TSPY4
HG03209_chrY	CAT	exon	8986410	8986959	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8986456	8986959	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000247:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	8986456	8986458	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000247;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8986960	8987566	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000247:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987567	8987644	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987567	8987644	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000247:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987645	8987772	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000247:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987773	8987884	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987773	8987884	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000247:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987885	8987992	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000247:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987993	8988131	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8987993	8988131	.	+	2	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000247:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988132	8988237	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000247:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8988238	8988319	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	8988238	8988289	.	+	1	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000247:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	8988287	8988289	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000247;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988320	8989013	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000247:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8989014	8989224	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000247;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000247;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000247:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	8986410	8989224	1000	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_G0000085;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=HG03209_ch_T0000248;Name=TSPY4
HG03209_chrY	CAT	exon	8986410	8986959	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8986960	8987566	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000248:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987567	8987644	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987645	8987772	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000248:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987773	8987884	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8987885	8987992	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000248:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8987993	8988131	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988132	8988226	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000248:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8988227	8988319	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8988320	8989013	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000248:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	8989014	8989224	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000248;gene_id=HG03209_ch_G0000085;Parent=HG03209_ch_T0000248;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000248:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	8998537	9004137	.	-	.	source_gene_common_name=FAM197Y8;source_gene=hg002_chrY_paternal_161;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;gene_id=HG03209_ch_G0000086;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG03209_ch_G0000086;Name=FAM197Y8
HG03209_chrY	CAT	transcript	8998537	9004137	1000	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_G0000086;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=HG03209_ch_T0000249;Name=FAM197Y8
HG03209_chrY	CAT	exon	8998537	8998596	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03209_ch_T0000249:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	8998597	9002146	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03209_ch_T0000249:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9002147	9002305	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03209_ch_T0000249:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9002306	9003803	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03209_ch_T0000249:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9003804	9003949	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03209_ch_T0000249:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9003950	9004035	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03209_ch_T0000249:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9004036	9004137	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03209_ch_T0000249;gene_id=HG03209_ch_G0000086;Parent=HG03209_ch_T0000249;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03209_ch_T0000249:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9006750	9009564	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_162;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;gene_id=HG03209_ch_G0000087;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000087;Name=TSPY9
HG03209_chrY	CAT	transcript	9006750	9009564	100	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03209_ch_T0000250;Name=TSPY9
HG03209_chrY	CAT	exon	9006750	9007299	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9006796	9007299	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9006796	9006798	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03209_ch_T0000250;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9007300	9007906	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000250:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9007907	9007984	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9007907	9007984	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9007985	9008112	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000250:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008113	9008224	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008113	9008224	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008225	9008325	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000250:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008326	9008471	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008326	9008471	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008472	9008577	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000250:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008578	9008659	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008578	9008659	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008660	9009353	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000250:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9009354	9009564	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000250:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9009354	9009376	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000250:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9009374	9009376	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000250;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000250;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03209_ch_T0000250;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9006750	9009564	100	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03209_ch_T0000251;Name=TSPY9
HG03209_chrY	CAT	exon	9006750	9007299	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9006796	9007299	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000251:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9006796	9006798	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03209_ch_T0000251;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9007300	9007906	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000251:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9007907	9007984	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9007907	9007984	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000251:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9007985	9008112	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000251:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008113	9008224	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008113	9008224	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000251:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008225	9008325	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000251:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008326	9008471	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008326	9008471	.	+	2	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000251:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008472	9008566	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000251:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9008567	9008659	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9008567	9008629	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000251:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9008627	9008629	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03209_ch_T0000251;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9008660	9009353	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000251:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9009354	9009564	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000251;gene_id=HG03209_ch_G0000087;Parent=HG03209_ch_T0000251;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000251:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9018859	9022626	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;gene_id=HG03209_ch_G0000088;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap_pairwise;ID=HG03209_ch_G0000088;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9018859	9022626	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000252;gene_id=HG03209_ch_G0000088;Parent=HG03209_ch_G0000088;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000252;Name=FAM197Y2
HG03209_chrY	CAT	exon	9018859	9018918	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000252;gene_id=HG03209_ch_G0000088;Parent=HG03209_ch_T0000252;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000252:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9018919	9022467	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000252;gene_id=HG03209_ch_G0000088;Parent=HG03209_ch_T0000252;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000252:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9022468	9022626	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000252;gene_id=HG03209_ch_G0000088;Parent=HG03209_ch_T0000252;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000252:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9027069	9029865	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_190;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;gene_id=HG03209_ch_G0000089;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000089;Name=TSPY10
HG03209_chrY	CAT	transcript	9027069	9029865	100	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_G0000089;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03209_ch_T0000253;Name=TSPY10
HG03209_chrY	CAT	exon	9027069	9027600	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9027115	9027600	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9027115	9027117	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9027601	9028207	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028208	9028285	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028208	9028285	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028286	9028413	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028414	9028525	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028414	9028525	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028526	9028626	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028627	9028772	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028627	9028772	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028773	9028878	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028879	9028960	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028879	9028960	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028961	9029654	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9029655	9029865	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9029655	9029677	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9029675	9029677	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03209_ch_T0000253;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000253;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9027069	9029865	100	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_G0000089;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03209_ch_T0000254;Name=TSPY10
HG03209_chrY	CAT	exon	9027069	9027600	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9027115	9027600	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9027115	9027117	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9027601	9028207	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028208	9028285	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028208	9028285	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028286	9028413	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028414	9028525	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028414	9028525	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028526	9028626	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028627	9028772	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028627	9028772	.	+	2	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028773	9028867	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028868	9028960	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028868	9028930	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9028928	9028930	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028961	9029654	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9029655	9029865	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03209_ch_T0000254;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000254;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9027069	9029865	100	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_G0000089;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03209_ch_T0000255;Name=TSPY10
HG03209_chrY	CAT	exon	9027069	9027600	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9027115	9027600	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9027115	9027117	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9027601	9028207	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028208	9028285	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028208	9028285	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028286	9028413	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028414	9028525	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028414	9028525	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028526	9028633	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028634	9028772	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028634	9028772	.	+	2	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028773	9028878	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028879	9028960	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9028879	9028930	.	+	1	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9028928	9028930	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028961	9029654	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9029655	9029865	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03209_ch_T0000255;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000255;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000255:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9027069	9029865	1000	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_G0000089;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=HG03209_ch_T0000256;Name=TSPY10
HG03209_chrY	CAT	exon	9027069	9027600	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9027601	9028207	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028208	9028285	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028286	9028413	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028414	9028525	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028526	9028633	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028634	9028772	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028773	9028867	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9028868	9028960	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9028961	9029654	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9029655	9029865	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03209_ch_T0000256;gene_id=HG03209_ch_G0000089;Parent=HG03209_ch_T0000256;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9039130	9044739	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;gene_id=HG03209_ch_G0000090;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000090;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9039130	9044739	1000	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_G0000090;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000257;Name=FAM197Y3
HG03209_chrY	CAT	exon	9039130	9039189	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9039190	9042740	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9042741	9042899	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9042900	9044405	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9044406	9044551	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9044552	9044637	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9044638	9044739	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000257;gene_id=HG03209_ch_G0000090;Parent=HG03209_ch_T0000257;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000257:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9047352	9050148	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;gene_id=HG03209_ch_G0000091;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000091;Name=TSPY10
HG03209_chrY	CAT	transcript	9047352	9050148	100	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03209_ch_T0000258;Name=TSPY10
HG03209_chrY	CAT	exon	9047352	9047883	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9047398	9047883	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9047398	9047400	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9047884	9048490	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048491	9048568	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048491	9048568	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048569	9048696	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048697	9048808	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048697	9048808	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048809	9048909	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048910	9049055	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048910	9049055	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049056	9049161	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049162	9049243	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9049162	9049243	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049244	9049937	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049938	9050148	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9049938	9049960	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9049958	9049960	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03209_ch_T0000258;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000258;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9047352	9050148	100	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03209_ch_T0000259;Name=TSPY10
HG03209_chrY	CAT	exon	9047352	9047883	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9047398	9047883	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9047398	9047400	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9047884	9048490	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048491	9048568	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048491	9048568	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048569	9048696	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048697	9048808	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048697	9048808	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048809	9048909	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048910	9049055	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048910	9049055	.	+	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049056	9049150	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049151	9049243	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9049151	9049213	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9049211	9049213	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049244	9049937	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049938	9050148	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03209_ch_T0000259;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000259;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9047352	9050148	100	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03209_ch_T0000260;Name=TSPY10
HG03209_chrY	CAT	exon	9047352	9047883	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9047398	9047883	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9047398	9047400	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9047884	9048490	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048491	9048568	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048491	9048568	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048569	9048696	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048697	9048808	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048697	9048808	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048809	9048916	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048917	9049055	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9048917	9049055	.	+	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049056	9049161	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049162	9049243	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9049162	9049213	.	+	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9049211	9049213	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049244	9049937	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049938	9050148	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03209_ch_T0000260;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000260;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9047352	9050148	1000	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_G0000091;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=HG03209_ch_T0000261;Name=TSPY10
HG03209_chrY	CAT	exon	9047352	9047883	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9047884	9048490	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048491	9048568	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048569	9048696	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048697	9048808	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9048809	9048916	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9048917	9049055	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049056	9049150	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049151	9049243	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9049244	9049937	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9049938	9050148	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03209_ch_T0000261;gene_id=HG03209_ch_G0000091;Parent=HG03209_ch_T0000261;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9059420	9065022	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;gene_id=HG03209_ch_G0000092;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000092;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9059420	9065022	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_G0000092;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000262;Name=FAM197Y3
HG03209_chrY	CAT	exon	9059420	9059479	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000262:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9059480	9063027	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000262:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9063028	9063186	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000262:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9063187	9064688	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000262:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9064689	9064834	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000262:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9064835	9064920	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000262:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9064921	9065022	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03209_ch_T0000262;gene_id=HG03209_ch_G0000092;Parent=HG03209_ch_T0000262;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000262:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9067631	9070427	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;gene_id=HG03209_ch_G0000093;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000093;Name=TSPY10
HG03209_chrY	CAT	transcript	9067631	9070427	100	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03209_ch_T0000263;Name=TSPY10
HG03209_chrY	CAT	exon	9067631	9068162	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9067677	9068162	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9067677	9067679	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068163	9068769	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068770	9068847	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068770	9068847	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068848	9068975	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068976	9069087	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068976	9069087	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069088	9069188	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069189	9069334	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069189	9069334	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069335	9069440	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069441	9069522	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069441	9069522	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069523	9070216	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9070217	9070427	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9070217	9070239	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9070237	9070239	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000263;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000263;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9067631	9070427	100	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03209_ch_T0000264;Name=TSPY10
HG03209_chrY	CAT	exon	9067631	9068162	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9067677	9068162	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9067677	9067679	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068163	9068769	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068770	9068847	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068770	9068847	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068848	9068975	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068976	9069087	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068976	9069087	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069088	9069188	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069189	9069334	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069189	9069334	.	+	2	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069335	9069429	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069430	9069522	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069430	9069492	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9069490	9069492	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069523	9070216	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9070217	9070427	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000264;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000264;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9067631	9070427	100	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_G0000093;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03209_ch_T0000265;Name=TSPY10
HG03209_chrY	CAT	exon	9067631	9068162	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9067677	9068162	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9067677	9067679	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068163	9068769	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068770	9068847	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068770	9068847	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068848	9068975	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068976	9069087	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9068976	9069087	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069088	9069195	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069196	9069334	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069196	9069334	.	+	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069335	9069440	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069441	9069522	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9069441	9069492	.	+	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9069490	9069492	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069523	9070216	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9070217	9070427	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000265;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000265;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9067631	9070427	1000	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_G0000093;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=HG03209_ch_T0000266;Name=TSPY10
HG03209_chrY	CAT	exon	9067631	9068162	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068163	9068769	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068770	9068847	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9068848	9068975	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9068976	9069087	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069088	9069195	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069196	9069334	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069335	9069429	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9069430	9069522	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9069523	9070216	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9070217	9070427	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000266;gene_id=HG03209_ch_G0000093;Parent=HG03209_ch_T0000266;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9079689	9085369	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_181;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;gene_id=HG03209_ch_G0000094;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000094;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9079689	9085369	1000	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_G0000094;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000267;Name=FAM197Y2
HG03209_chrY	CAT	exon	9079689	9079748	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9079749	9083297	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9083298	9083456	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9083457	9084946	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9084947	9085092	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9085093	9085178	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9085179	9085369	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000267;gene_id=HG03209_ch_G0000094;Parent=HG03209_ch_T0000267;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000267:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9087893	9090689	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;gene_id=HG03209_ch_G0000095;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000095;Name=TSPY10
HG03209_chrY	CAT	transcript	9087893	9090689	100	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03209_ch_T0000268;Name=TSPY10
HG03209_chrY	CAT	exon	9087893	9088424	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9087939	9088424	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9087939	9087941	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9088425	9089031	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089032	9089109	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089032	9089109	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089110	9089237	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089238	9089349	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089238	9089349	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089350	9089450	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089451	9089596	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089451	9089596	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089597	9089702	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089703	9089784	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089703	9089784	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089785	9090478	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9090479	9090689	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000268:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9090479	9090501	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000268:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9090499	9090501	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03209_ch_T0000268;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9087893	9090689	100	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03209_ch_T0000269;Name=TSPY10
HG03209_chrY	CAT	exon	9087893	9088424	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9087939	9088424	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9087939	9087941	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9088425	9089031	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089032	9089109	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089032	9089109	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089110	9089237	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089238	9089349	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089238	9089349	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089350	9089450	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089451	9089596	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089451	9089596	.	+	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089597	9089691	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089692	9089784	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089692	9089754	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9089752	9089754	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089785	9090478	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9090479	9090689	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03209_ch_T0000269;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000269:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9087893	9090689	100	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03209_ch_T0000270;Name=TSPY10
HG03209_chrY	CAT	exon	9087893	9088424	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9087939	9088424	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9087939	9087941	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000270;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9088425	9089031	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089032	9089109	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089032	9089109	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089110	9089237	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089238	9089349	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089238	9089349	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089350	9089457	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089458	9089596	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089458	9089596	.	+	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089597	9089702	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089703	9089784	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9089703	9089754	.	+	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9089752	9089754	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000270;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089785	9090478	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9090479	9090689	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03209_ch_T0000270;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000270:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9087893	9090689	1000	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_G0000095;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=HG03209_ch_T0000271;Name=TSPY10
HG03209_chrY	CAT	exon	9087893	9088424	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9088425	9089031	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000271:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089032	9089109	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089110	9089237	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000271:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089238	9089349	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089350	9089457	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000271:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089458	9089596	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089597	9089691	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000271:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9089692	9089784	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9089785	9090478	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000271:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9090479	9090689	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03209_ch_T0000271;gene_id=HG03209_ch_G0000095;Parent=HG03209_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000271:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9099964	9105646	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;gene_id=HG03209_ch_G0000096;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000096;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9099964	9105646	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_G0000096;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000272;Name=FAM197Y2
HG03209_chrY	CAT	exon	9099964	9100023	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9100024	9103572	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9103573	9103731	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000272:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9103732	9105223	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000272:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9105224	9105369	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000272:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9105370	9105455	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000272:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9105456	9105646	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000272;gene_id=HG03209_ch_G0000096;Parent=HG03209_ch_T0000272;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000272:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9108170	9110984	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;gene_id=HG03209_ch_G0000097;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03209_ch_G0000097;Name=TSPY4
HG03209_chrY	CAT	transcript	9108170	9110984	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03209_ch_T0000273;Name=TSPY4
HG03209_chrY	CAT	exon	9108170	9108719	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9108216	9108719	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9108216	9108218	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9108720	9109326	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000273:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109327	9109404	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109327	9109404	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109405	9109532	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000273:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109533	9109644	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109533	9109644	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109645	9109745	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000273:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109746	9109891	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109746	9109891	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109892	9109997	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000273:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109998	9110079	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109998	9110079	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9110080	9110773	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000273:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9110774	9110984	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9110774	9110796	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000273:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9110794	9110796	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03209_ch_T0000273;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000273;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000273;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9108170	9110984	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03209_ch_T0000274;Name=TSPY4
HG03209_chrY	CAT	exon	9108170	9108719	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9108216	9108719	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9108216	9108218	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9108720	9109326	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000274:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109327	9109404	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109327	9109404	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109405	9109532	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000274:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109533	9109644	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109533	9109644	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109645	9109745	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000274:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109746	9109891	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109746	9109891	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109892	9109986	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000274:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109987	9110079	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109987	9110049	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9110047	9110049	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000274;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9110080	9110773	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000274:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9110774	9110984	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03209_ch_T0000274;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000274;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000274:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9108170	9110984	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03209_ch_T0000275;Name=TSPY4
HG03209_chrY	CAT	exon	9108170	9108719	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9108216	9108719	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9108216	9108218	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9108720	9109326	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000275:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109327	9109404	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109327	9109404	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109405	9109532	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000275:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109533	9109644	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109533	9109644	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109645	9109752	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000275:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109753	9109891	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109753	9109891	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109892	9109997	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000275:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109998	9110079	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9109998	9110049	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9110047	9110049	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000275;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9110080	9110773	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000275:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9110774	9110984	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000275;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000275;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000275:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9108170	9110984	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_G0000097;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=HG03209_ch_T0000276;Name=TSPY4
HG03209_chrY	CAT	exon	9108170	9108719	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9108720	9109326	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000276:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109327	9109404	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109405	9109532	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000276:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109533	9109644	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109645	9109752	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000276:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109753	9109891	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9109892	9109986	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000276:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9109987	9110079	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9110080	9110773	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000276:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9110774	9110984	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.4,hg002_chrY_paternal_174.4;transcript_id=HG03209_ch_T0000276;gene_id=HG03209_ch_G0000097;Parent=HG03209_ch_T0000276;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000276:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9128470	9131284	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_176;alternative_source_transcripts=hg002_chrY_paternal_194.4;gene_id=HG03209_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=HG03209_ch_G0000098;Name=TSPY3
HG03209_chrY	CAT	transcript	9128470	9131284	1000	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_G0000098;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=HG03209_ch_T0000277;Name=TSPY3
HG03209_chrY	CAT	exon	9128470	9129019	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9129020	9129626	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000277:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9129627	9129704	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9129705	9129832	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000277:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9129833	9129944	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9129945	9130052	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000277:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9130053	9130191	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9130192	9130286	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000277:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9130287	9130379	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9130380	9131073	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000277:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9131074	9131284	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000277;gene_id=HG03209_ch_G0000098;Parent=HG03209_ch_T0000277;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000277:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9140547	9146155	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;alternative_source_transcripts=hg002_chrY_paternal_177.1;gene_id=HG03209_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG03209_ch_G0000099;Name=FAM197Y7
HG03209_chrY	CAT	transcript	9140547	9146155	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_G0000099;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG03209_ch_T0000278;Name=FAM197Y7
HG03209_chrY	CAT	exon	9140547	9140606	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000278:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9140607	9144160	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000278:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9144161	9144319	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000278:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9144320	9145821	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000278:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9145822	9145967	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000278:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9145968	9146053	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000278:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9146054	9146155	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03209_ch_T0000278;gene_id=HG03209_ch_G0000099;Parent=HG03209_ch_T0000278;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000278:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9148768	9151564	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;gene_id=HG03209_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03209_ch_G0000100;Name=TSPY1
HG03209_chrY	CAT	transcript	9148768	9151564	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_G0000100;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03209_ch_T0000279;Name=TSPY1
HG03209_chrY	CAT	exon	9148768	9149299	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9148814	9149299	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9148814	9148816	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149300	9149906	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149907	9149984	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9149907	9149984	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149985	9150112	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150113	9150224	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150113	9150224	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150225	9150325	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150326	9150471	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150326	9150471	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150472	9150577	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150578	9150659	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150578	9150659	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150660	9151353	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9151354	9151564	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9151354	9151376	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9151374	9151376	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03209_ch_T0000279;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000279;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000279;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9148768	9151564	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_G0000100;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03209_ch_T0000280;Name=TSPY1
HG03209_chrY	CAT	exon	9148768	9149299	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9148814	9149299	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9148814	9148816	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149300	9149906	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149907	9149984	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9149907	9149984	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149985	9150112	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150113	9150224	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150113	9150224	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150225	9150325	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150326	9150471	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150326	9150471	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150472	9150566	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150567	9150659	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150567	9150629	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9150627	9150629	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150660	9151353	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9151354	9151564	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03209_ch_T0000280;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000280;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9148768	9151564	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_G0000100;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03209_ch_T0000281;Name=TSPY1
HG03209_chrY	CAT	exon	9148768	9149299	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9148814	9149299	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9148814	9148816	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149300	9149906	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149907	9149984	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9149907	9149984	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149985	9150112	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150113	9150224	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150113	9150224	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150225	9150332	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150333	9150471	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150333	9150471	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150472	9150577	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150578	9150659	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150578	9150629	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9150627	9150629	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150660	9151353	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9151354	9151564	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03209_ch_T0000281;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000281;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9148768	9151564	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_G0000100;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03209_ch_T0000282;Name=TSPY1
HG03209_chrY	CAT	exon	9148768	9148900	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9148814	9148900	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9148814	9148816	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9148901	9149161	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149162	9149299	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9149162	9149299	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149300	9149906	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149907	9149984	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9149907	9149984	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149985	9150112	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150113	9150224	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150113	9150224	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150225	9150325	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150326	9150471	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150326	9150471	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150472	9150577	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150578	9150659	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9150578	9150659	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150660	9151353	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9151354	9151564	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9151354	9151376	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000282:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9151374	9151376	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03209_ch_T0000282;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000282;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9148768	9151564	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_G0000100;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG03209_ch_T0000283;Name=TSPY1
HG03209_chrY	CAT	exon	9148768	9149299	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149300	9149906	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9149907	9149984	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9149985	9150112	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150113	9150224	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150225	9150332	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150333	9150471	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150472	9150566	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9150567	9150659	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9150660	9151353	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9151354	9151564	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03209_ch_T0000283;gene_id=HG03209_ch_G0000100;Parent=HG03209_ch_T0000283;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000283:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9160844	9166449	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;gene_id=HG03209_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000101;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9160844	9166449	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_G0000101;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000284;Name=FAM197Y3
HG03209_chrY	CAT	exon	9160844	9160903	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000284:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9160904	9164454	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000284:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9164455	9164613	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000284:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9164614	9166115	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000284:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9166116	9166261	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000284:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9166262	9166347	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000284:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9166348	9166449	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000284;gene_id=HG03209_ch_G0000101;Parent=HG03209_ch_T0000284;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000284:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9169062	9171858	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;gene_id=HG03209_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03209_ch_G0000102;Name=TSPY1
HG03209_chrY	CAT	transcript	9169062	9171858	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03209_ch_T0000285;Name=TSPY1
HG03209_chrY	CAT	exon	9169062	9169593	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9169108	9169593	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9169108	9169110	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000285;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169594	9170200	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170201	9170278	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170201	9170278	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170279	9170406	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170407	9170518	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170407	9170518	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170519	9170619	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170620	9170765	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170620	9170765	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170766	9170871	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170872	9170953	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170872	9170953	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170954	9171647	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9171648	9171858	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000285:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9171648	9171670	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000285:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9171668	9171670	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03209_ch_T0000285;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000285;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000285;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9169062	9171858	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03209_ch_T0000286;Name=TSPY1
HG03209_chrY	CAT	exon	9169062	9169593	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9169108	9169593	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9169108	9169110	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000286;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169594	9170200	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000286:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170201	9170278	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170201	9170278	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170279	9170406	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000286:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170407	9170518	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170407	9170518	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170519	9170619	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000286:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170620	9170765	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170620	9170765	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170766	9170860	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000286:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170861	9170953	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170861	9170923	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9170921	9170923	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000286;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170954	9171647	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000286:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9171648	9171858	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03209_ch_T0000286;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000286;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000286:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9169062	9171858	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03209_ch_T0000287;Name=TSPY1
HG03209_chrY	CAT	exon	9169062	9169593	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9169108	9169593	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9169108	9169110	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169594	9170200	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170201	9170278	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170201	9170278	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170279	9170406	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170407	9170518	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170407	9170518	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170519	9170626	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170627	9170765	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170627	9170765	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170766	9170871	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170872	9170953	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170872	9170923	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9170921	9170923	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170954	9171647	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9171648	9171858	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03209_ch_T0000287;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000287:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9169062	9171858	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03209_ch_T0000288;Name=TSPY1
HG03209_chrY	CAT	exon	9169062	9169194	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9169108	9169194	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9169108	9169110	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169195	9169455	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9169456	9169593	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9169456	9169593	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169594	9170200	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170201	9170278	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170201	9170278	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170279	9170406	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170407	9170518	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170407	9170518	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170519	9170619	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170620	9170765	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170620	9170765	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170766	9170871	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170872	9170953	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9170872	9170953	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170954	9171647	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9171648	9171858	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000288:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9171648	9171670	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000288:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9171668	9171670	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03209_ch_T0000288;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9169062	9171858	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_G0000102;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG03209_ch_T0000289;Name=TSPY1
HG03209_chrY	CAT	exon	9169062	9169593	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9169594	9170200	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170201	9170278	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170279	9170406	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170407	9170518	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170519	9170626	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170627	9170765	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170766	9170860	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9170861	9170953	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9170954	9171647	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9171648	9171858	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03209_ch_T0000289;gene_id=HG03209_ch_G0000102;Parent=HG03209_ch_T0000289;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000289:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9181128	9186833	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_185;alternative_source_transcripts=hg002_chrY_paternal_181.1;gene_id=HG03209_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000103;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9181128	9186833	1000	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_G0000103;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000290;Name=FAM197Y2
HG03209_chrY	CAT	exon	9181128	9181187	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9181188	9184747	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000290:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9184748	9184906	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9184907	9186410	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000290:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9186411	9186556	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9186557	9186642	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000290:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9186643	9186833	.	-	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03209_ch_T0000290;gene_id=HG03209_ch_G0000103;Parent=HG03209_ch_T0000290;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000290:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9189357	9192154	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_180;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;gene_id=HG03209_ch_G0000104;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000104;Name=TSPY10
HG03209_chrY	CAT	transcript	9189357	9192154	100	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_G0000104;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03209_ch_T0000291;Name=TSPY10
HG03209_chrY	CAT	exon	9189357	9189888	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9189403	9189888	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9189403	9189405	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9189889	9190495	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000291:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190496	9190573	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190496	9190573	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190574	9190701	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000291:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190702	9190813	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190702	9190813	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190814	9190914	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000291:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190915	9191060	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190915	9191060	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191061	9191166	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000291:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191167	9191248	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9191167	9191248	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191249	9191942	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000291:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191943	9192154	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9191943	9191965	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000291:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9191963	9191965	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000291;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000291;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000291;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9189357	9192154	100	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_G0000104;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03209_ch_T0000292;Name=TSPY10
HG03209_chrY	CAT	exon	9189357	9189888	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9189403	9189888	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9189403	9189405	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9189889	9190495	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190496	9190573	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190496	9190573	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190574	9190701	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190702	9190813	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190702	9190813	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190814	9190914	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190915	9191060	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190915	9191060	.	+	2	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191061	9191155	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191156	9191248	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9191156	9191218	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9191216	9191218	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191249	9191942	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191943	9192154	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000292;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000292;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000292:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9189357	9192154	100	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_G0000104;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03209_ch_T0000293;Name=TSPY10
HG03209_chrY	CAT	exon	9189357	9189888	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9189403	9189888	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9189403	9189405	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9189889	9190495	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190496	9190573	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190496	9190573	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190574	9190701	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190702	9190813	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190702	9190813	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190814	9190921	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190922	9191060	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9190922	9191060	.	+	2	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191061	9191166	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191167	9191248	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9191167	9191218	.	+	1	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9191216	9191218	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191249	9191942	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191943	9192154	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000293;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000293;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9189357	9192154	1000	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_G0000104;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=HG03209_ch_T0000294;Name=TSPY10
HG03209_chrY	CAT	exon	9189357	9189888	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9189889	9190495	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190496	9190573	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190574	9190701	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190702	9190813	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9190814	9190921	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9190922	9191060	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191061	9191155	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191156	9191248	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9191249	9191942	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9191943	9192154	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000294;gene_id=HG03209_ch_G0000104;Parent=HG03209_ch_T0000294;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9201444	9207132	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_171;alternative_source_transcripts=hg002_chrY_paternal_183.1;gene_id=HG03209_ch_G0000105;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000105;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9201444	9207132	1000	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_G0000105;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000295;Name=FAM197Y2
HG03209_chrY	CAT	exon	9201444	9201503	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9201504	9205054	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000295:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9205055	9205213	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9205214	9206709	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000295:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9206710	9206855	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9206856	9206941	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000295:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9206942	9207132	.	-	.	source_transcript=hg002_chrY_paternal_171.1;source_transcript_name=hg002_chrY_paternal_171.1;source_gene=hg002_chrY_paternal_171;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_171;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_171.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_171.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03209_ch_T0000295;gene_id=HG03209_ch_G0000105;Parent=HG03209_ch_T0000295;transcript_name=hg002_chrY_paternal_171.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000295:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9209657	9212453	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_200;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;gene_id=HG03209_ch_G0000106;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000106;Name=TSPY10
HG03209_chrY	CAT	transcript	9209657	9212453	100	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_G0000106;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03209_ch_T0000296;Name=TSPY10
HG03209_chrY	CAT	exon	9209657	9210188	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9209703	9210188	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9209703	9209705	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000296;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210189	9210795	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000296:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9210796	9210873	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9210796	9210873	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210874	9211001	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000296:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211002	9211113	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211002	9211113	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211114	9211214	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000296:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211215	9211360	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211215	9211360	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211361	9211466	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000296:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211467	9211548	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211467	9211548	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211549	9212242	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000296:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9212243	9212453	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000296:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9212243	9212265	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000296:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9212263	9212265	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03209_ch_T0000296;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000296;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000296;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9209657	9212453	100	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_G0000106;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03209_ch_T0000297;Name=TSPY10
HG03209_chrY	CAT	exon	9209657	9210188	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9209703	9210188	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000297:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9209703	9209705	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000297;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210189	9210795	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000297:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9210796	9210873	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9210796	9210873	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000297:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210874	9211001	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000297:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211002	9211113	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211002	9211113	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000297:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211114	9211214	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000297:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211215	9211360	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211215	9211360	.	+	2	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000297:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211361	9211455	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000297:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211456	9211548	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211456	9211518	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000297:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9211516	9211518	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000297;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211549	9212242	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000297:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9212243	9212453	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03209_ch_T0000297;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000297;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000297:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9209657	9212453	100	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_G0000106;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03209_ch_T0000298;Name=TSPY10
HG03209_chrY	CAT	exon	9209657	9210188	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9209703	9210188	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9209703	9209705	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000298;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210189	9210795	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000298:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9210796	9210873	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9210796	9210873	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210874	9211001	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000298:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211002	9211113	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211002	9211113	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211114	9211221	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000298:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211222	9211360	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211222	9211360	.	+	2	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211361	9211466	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000298:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211467	9211548	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9211467	9211518	.	+	1	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9211516	9211518	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000298;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211549	9212242	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000298:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9212243	9212453	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03209_ch_T0000298;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000298;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000298:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9209657	9212453	1000	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_G0000106;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=HG03209_ch_T0000299;Name=TSPY10
HG03209_chrY	CAT	exon	9209657	9210188	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210189	9210795	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000299:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9210796	9210873	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9210874	9211001	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000299:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211002	9211113	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211114	9211221	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000299:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211222	9211360	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211361	9211455	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000299:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9211456	9211548	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9211549	9212242	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000299:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9212243	9212453	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03209_ch_T0000299;gene_id=HG03209_ch_G0000106;Parent=HG03209_ch_T0000299;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000299:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9221735	9227332	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;gene_id=HG03209_ch_G0000107;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff,transMap_pairwise;ID=HG03209_ch_G0000107;Name=FAM197Y7
HG03209_chrY	CAT	transcript	9221735	9227332	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_G0000107;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG03209_ch_T0000300;Name=FAM197Y7
HG03209_chrY	CAT	exon	9221735	9221794	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000300:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9221795	9225343	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000300:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9225344	9225502	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000300:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9225503	9226998	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000300:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9226999	9227144	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000300:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9227145	9227230	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03209_ch_T0000300:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9227231	9227332	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000300;gene_id=HG03209_ch_G0000107;Parent=HG03209_ch_T0000300;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03209_ch_T0000300:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9229945	9232759	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;gene_id=HG03209_ch_G0000108;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03209_ch_G0000108;Name=TSPY4
HG03209_chrY	CAT	transcript	9229945	9232759	100	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03209_ch_T0000301;Name=TSPY4
HG03209_chrY	CAT	exon	9229945	9230494	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9229991	9230494	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9229991	9229993	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000301;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9230495	9231101	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000301:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231102	9231179	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231102	9231179	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231180	9231307	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000301:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231308	9231419	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231308	9231419	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231420	9231520	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000301:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231521	9231666	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231521	9231666	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231667	9231772	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000301:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231773	9231854	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231773	9231854	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231855	9232548	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000301:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9232549	9232759	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000301:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9232549	9232571	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000301:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9232569	9232571	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;transcript_id=HG03209_ch_T0000301;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000301;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000301;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9229945	9232759	100	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03209_ch_T0000302;Name=TSPY4
HG03209_chrY	CAT	exon	9229945	9230494	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9229991	9230494	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000302:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9229991	9229993	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000302;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9230495	9231101	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000302:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231102	9231179	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231102	9231179	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000302:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231180	9231307	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000302:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231308	9231419	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231308	9231419	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000302:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231420	9231520	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000302:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231521	9231666	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231521	9231666	.	+	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000302:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231667	9231761	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000302:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231762	9231854	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231762	9231824	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000302:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9231822	9231824	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000302;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231855	9232548	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000302:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9232549	9232759	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;transcript_id=HG03209_ch_T0000302;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000302;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000302:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9229945	9232759	100	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_G0000108;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03209_ch_T0000303;Name=TSPY4
HG03209_chrY	CAT	exon	9229945	9230494	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9229991	9230494	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000303:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9229991	9229993	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000303;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9230495	9231101	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000303:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231102	9231179	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231102	9231179	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000303:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231180	9231307	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000303:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231308	9231419	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231308	9231419	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000303:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231420	9231527	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000303:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231528	9231666	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231528	9231666	.	+	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000303:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231667	9231772	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000303:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231773	9231854	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9231773	9231824	.	+	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000303:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9231822	9231824	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000303;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231855	9232548	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000303:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9232549	9232759	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;transcript_id=HG03209_ch_T0000303;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000303;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000303:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9229945	9232759	1000	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_G0000108;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG03209_ch_T0000304;Name=TSPY4
HG03209_chrY	CAT	exon	9229945	9230494	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9230495	9231101	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000304:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231102	9231179	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231180	9231307	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000304:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231308	9231419	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231420	9231527	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000304:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231528	9231666	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231667	9231761	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000304:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9231762	9231854	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9231855	9232548	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000304:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9232549	9232759	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;transcript_id=HG03209_ch_T0000304;gene_id=HG03209_ch_G0000108;Parent=HG03209_ch_T0000304;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000304:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9242025	9247636	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;gene_id=HG03209_ch_G0000109;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000109;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9242025	9247636	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_G0000109;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000305;Name=FAM197Y3
HG03209_chrY	CAT	exon	9242025	9242084	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000305:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9242085	9245635	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000305:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9245636	9245794	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000305:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9245795	9247302	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000305:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9247303	9247448	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000305:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9247449	9247534	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000305:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9247535	9247636	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03209_ch_T0000305;gene_id=HG03209_ch_G0000109;Parent=HG03209_ch_T0000305;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000305:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9250249	9253045	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;gene_id=HG03209_ch_G0000110;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000110;Name=TSPY10
HG03209_chrY	CAT	transcript	9250249	9253045	100	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_G0000110;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03209_ch_T0000306;Name=TSPY10
HG03209_chrY	CAT	exon	9250249	9250780	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9250295	9250780	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9250295	9250297	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000306;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9250781	9251387	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000306:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251388	9251465	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251388	9251465	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251466	9251593	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000306:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251594	9251705	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251594	9251705	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251706	9251806	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000306:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251807	9251952	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251807	9251952	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251953	9252058	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000306:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252059	9252140	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9252059	9252140	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9252141	9252834	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000306:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252835	9253045	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000306:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9252835	9252857	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000306:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9252855	9252857	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03209_ch_T0000306;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000306;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000306;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9250249	9253045	100	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_G0000110;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03209_ch_T0000307;Name=TSPY10
HG03209_chrY	CAT	exon	9250249	9250780	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9250295	9250780	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9250295	9250297	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9250781	9251387	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251388	9251465	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251388	9251465	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251466	9251593	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251594	9251705	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251594	9251705	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251706	9251806	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251807	9251952	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251807	9251952	.	+	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251953	9252047	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252048	9252140	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9252048	9252110	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9252108	9252110	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9252141	9252834	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252835	9253045	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03209_ch_T0000307;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000307;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000307:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9250249	9253045	100	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_G0000110;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03209_ch_T0000308;Name=TSPY10
HG03209_chrY	CAT	exon	9250249	9250780	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9250295	9250780	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9250295	9250297	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9250781	9251387	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251388	9251465	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251388	9251465	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251466	9251593	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251594	9251705	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251594	9251705	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251706	9251813	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251814	9251952	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9251814	9251952	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251953	9252058	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252059	9252140	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9252059	9252110	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9252108	9252110	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9252141	9252834	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252835	9253045	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03209_ch_T0000308;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000308;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000308:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9250249	9253045	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_G0000110;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG03209_ch_T0000309;Name=TSPY10
HG03209_chrY	CAT	exon	9250249	9250780	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9250781	9251387	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251388	9251465	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251466	9251593	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251594	9251705	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251706	9251813	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9251814	9251952	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9251953	9252047	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252048	9252140	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9252141	9252834	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9252835	9253045	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03209_ch_T0000309;gene_id=HG03209_ch_G0000110;Parent=HG03209_ch_T0000309;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000309:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9262314	9268008	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;gene_id=HG03209_ch_G0000111;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000111;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9262314	9268008	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_G0000111;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000310;Name=FAM197Y2
HG03209_chrY	CAT	exon	9262314	9262373	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000310:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9262374	9265924	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000310:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9265925	9266083	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000310:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9266084	9267585	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000310:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9267586	9267731	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000310:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9267732	9267817	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000310:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9267818	9268008	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03209_ch_T0000310;gene_id=HG03209_ch_G0000111;Parent=HG03209_ch_T0000310;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000310:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9270532	9273329	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_208;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;gene_id=HG03209_ch_G0000112;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG03209_ch_G0000112;Name=TSPY3
HG03209_chrY	CAT	transcript	9270532	9273329	100	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_G0000112;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=HG03209_ch_T0000311;Name=TSPY3
HG03209_chrY	CAT	exon	9270532	9271063	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9270578	9271063	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9270578	9270580	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:HG03209_ch_T0000311;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271064	9271670	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000311:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271671	9271748	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271671	9271748	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271749	9271876	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000311:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271877	9271988	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271877	9271988	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271989	9272089	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000311:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272090	9272235	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272090	9272235	.	+	2	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272236	9272341	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000311:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272342	9272423	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272342	9272423	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272424	9273117	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000311:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9273118	9273329	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000311:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9273118	9273140	.	+	2	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000311:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9273138	9273140	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03209_ch_T0000311;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000311;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:HG03209_ch_T0000311;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9270532	9273329	100	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_G0000112;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=HG03209_ch_T0000312;Name=TSPY3
HG03209_chrY	CAT	exon	9270532	9271063	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9270578	9271063	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000312:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9270578	9270580	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:HG03209_ch_T0000312;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271064	9271670	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000312:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271671	9271748	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271671	9271748	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000312:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271749	9271876	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000312:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271877	9271988	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271877	9271988	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000312:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271989	9272089	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000312:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272090	9272235	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272090	9272235	.	+	2	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000312:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272236	9272330	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000312:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272331	9272423	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272331	9272393	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000312:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9272391	9272393	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:HG03209_ch_T0000312;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272424	9273117	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000312:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9273118	9273329	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03209_ch_T0000312;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000312;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000312:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9270532	9273329	100	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_G0000112;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=HG03209_ch_T0000313;Name=TSPY3
HG03209_chrY	CAT	exon	9270532	9271063	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9270578	9271063	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9270578	9270580	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:HG03209_ch_T0000313;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271064	9271670	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271671	9271748	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271671	9271748	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271749	9271876	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271877	9271988	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9271877	9271988	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271989	9272096	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272097	9272235	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272097	9272235	.	+	2	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272236	9272341	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272342	9272423	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9272342	9272393	.	+	1	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:HG03209_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9272391	9272393	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:HG03209_ch_T0000313;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272424	9273117	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:HG03209_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9273118	9273329	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03209_ch_T0000313;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000313;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:HG03209_ch_T0000313:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9270532	9273329	1000	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_G0000112;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=HG03209_ch_T0000314;Name=TSPY3
HG03209_chrY	CAT	exon	9270532	9271063	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271064	9271670	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:HG03209_ch_T0000314:0;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271671	9271748	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271749	9271876	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:HG03209_ch_T0000314:1;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9271877	9271988	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9271989	9272096	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:HG03209_ch_T0000314:2;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272097	9272235	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272236	9272330	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:HG03209_ch_T0000314:3;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9272331	9272423	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9272424	9273117	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:HG03209_ch_T0000314:4;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9273118	9273329	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_208.4;transcript_id=HG03209_ch_T0000314;gene_id=HG03209_ch_G0000112;Parent=HG03209_ch_T0000314;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:HG03209_ch_T0000314:5;Name=TSPY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9282633	9288323	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_215;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;gene_id=HG03209_ch_G0000113;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000113;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9282633	9288323	1000	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_G0000113;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000315;Name=FAM197Y2
HG03209_chrY	CAT	exon	9282633	9282692	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000315:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9282693	9286239	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000315:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9286240	9286398	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000315:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9286399	9287900	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000315:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9287901	9288046	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000315:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9288047	9288132	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000315:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9288133	9288323	.	-	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03209_ch_T0000315;gene_id=HG03209_ch_G0000113;Parent=HG03209_ch_T0000315;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000315:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9290848	9293644	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;gene_id=HG03209_ch_G0000114;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03209_ch_G0000114;Name=TSPY1
HG03209_chrY	CAT	transcript	9290848	9293644	100	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_G0000114;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03209_ch_T0000316;Name=TSPY1
HG03209_chrY	CAT	exon	9290848	9291379	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9290894	9291379	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9290894	9290896	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000316;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9291380	9291986	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291987	9292064	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9291987	9292064	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292065	9292192	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292193	9292304	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292193	9292304	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292305	9292405	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292406	9292551	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292406	9292551	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292552	9292657	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292658	9292739	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292658	9292739	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292740	9293433	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9293434	9293644	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9293434	9293456	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9293454	9293456	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03209_ch_T0000316;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000316;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000316;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9290848	9293644	100	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_G0000114;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03209_ch_T0000317;Name=TSPY1
HG03209_chrY	CAT	exon	9290848	9291379	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9290894	9291379	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9290894	9290896	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000317;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9291380	9291986	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000317:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291987	9292064	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9291987	9292064	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292065	9292192	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000317:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292193	9292304	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292193	9292304	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292305	9292405	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000317:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292406	9292551	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292406	9292551	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292552	9292646	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000317:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292647	9292739	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292647	9292709	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9292707	9292709	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000317;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292740	9293433	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000317:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9293434	9293644	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03209_ch_T0000317;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000317;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000317:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9290848	9293644	100	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_G0000114;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03209_ch_T0000318;Name=TSPY1
HG03209_chrY	CAT	exon	9290848	9291379	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9290894	9291379	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9290894	9290896	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9291380	9291986	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291987	9292064	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9291987	9292064	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292065	9292192	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292193	9292304	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292193	9292304	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292305	9292412	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292413	9292551	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292413	9292551	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292552	9292657	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292658	9292739	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292658	9292709	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9292707	9292709	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292740	9293433	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9293434	9293644	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03209_ch_T0000318;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000318;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9290848	9293644	100	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_G0000114;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03209_ch_T0000319;Name=TSPY1
HG03209_chrY	CAT	exon	9290848	9290980	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9290894	9290980	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9290894	9290896	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000319;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9290981	9291241	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291242	9291379	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9291242	9291379	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9291380	9291986	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291987	9292064	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9291987	9292064	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292065	9292192	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292193	9292304	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292193	9292304	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292305	9292405	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292406	9292551	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292406	9292551	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292552	9292657	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292658	9292739	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9292658	9292739	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292740	9293433	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000319:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9293434	9293644	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000319:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9293434	9293456	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000319:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9293454	9293456	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000319;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000319;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000319;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9290848	9293644	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_G0000114;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=HG03209_ch_T0000320;Name=TSPY1
HG03209_chrY	CAT	exon	9290848	9291379	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9291380	9291986	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9291987	9292064	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292065	9292192	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292193	9292304	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292305	9292412	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292413	9292551	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292552	9292646	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9292647	9292739	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9292740	9293433	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9293434	9293644	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03209_ch_T0000320;gene_id=HG03209_ch_G0000114;Parent=HG03209_ch_T0000320;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000320:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9302933	9308531	.	-	.	source_gene_common_name=FAM197Y5;source_gene=hg002_chrY_paternal_205;alternative_source_transcripts=hg002_chrY_paternal_211.1;gene_id=HG03209_ch_G0000115;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG03209_ch_G0000115;Name=FAM197Y5
HG03209_chrY	CAT	transcript	9302933	9308531	1000	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_G0000115;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=HG03209_ch_T0000321;Name=FAM197Y5
HG03209_chrY	CAT	exon	9302933	9302992	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03209_ch_T0000321:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9302993	9306541	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03209_ch_T0000321:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9306542	9306700	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03209_ch_T0000321:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9306701	9308197	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03209_ch_T0000321:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9308198	9308343	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03209_ch_T0000321:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9308344	9308429	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03209_ch_T0000321:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9308430	9308531	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=HG03209_ch_T0000321;gene_id=HG03209_ch_G0000115;Parent=HG03209_ch_T0000321;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03209_ch_T0000321:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9311144	9313940	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;gene_id=HG03209_ch_G0000116;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03209_ch_G0000116;Name=TSPY1
HG03209_chrY	CAT	transcript	9311144	9313940	9970	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_G0000116;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03209_ch_T0000322;Name=TSPY1
HG03209_chrY	CAT	exon	9311144	9311276	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9311190	9311276	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9311190	9311192	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9311277	9311537	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9311538	9311675	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9311538	9311675	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9311676	9312282	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9312283	9312360	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9312283	9312360	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9312361	9312488	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9312489	9312600	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9312489	9312600	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9312601	9312701	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9312702	9312847	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9312702	9312847	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9312848	9312953	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9312954	9313035	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9312954	9313035	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9313036	9313729	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9313730	9313940	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000322:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9313730	9313752	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000322:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9313750	9313752	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000322;gene_id=HG03209_ch_G0000116;Parent=HG03209_ch_T0000322;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9323210	9328821	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_187;alternative_source_transcripts=hg002_chrY_paternal_197.1;gene_id=HG03209_ch_G0000117;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000117;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9323210	9328821	1000	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_G0000117;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000323;Name=FAM197Y3
HG03209_chrY	CAT	exon	9323210	9323269	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000323:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9323270	9326820	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000323:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9326821	9326979	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000323:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9326980	9328487	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000323:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9328488	9328633	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000323:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9328634	9328719	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000323:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9328720	9328821	.	-	.	source_transcript=hg002_chrY_paternal_187.1;source_transcript_name=hg002_chrY_paternal_187.1;source_gene=hg002_chrY_paternal_187;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_187;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_187.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03209_ch_T0000323;gene_id=HG03209_ch_G0000117;Parent=HG03209_ch_T0000323;transcript_name=hg002_chrY_paternal_187.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000323:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9331434	9334230	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_214.2;gene_id=HG03209_ch_G0000118;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03209_ch_G0000118;Name=TSPY1
HG03209_chrY	CAT	transcript	9331434	9334230	9980	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_G0000118;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03209_ch_T0000324;Name=TSPY1
HG03209_chrY	CAT	exon	9331434	9331566	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9331480	9331566	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9331480	9331482	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9331567	9331827	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9331828	9331965	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9331828	9331965	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9331966	9332572	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9332573	9332650	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9332573	9332650	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9332651	9332778	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9332779	9332890	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9332779	9332890	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9332891	9332991	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9332992	9333137	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9332992	9333137	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9333138	9333243	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9333244	9333325	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9333244	9333325	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9333326	9334019	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9334020	9334230	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000324:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9334020	9334042	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000324:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9334040	9334042	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000324;gene_id=HG03209_ch_G0000118;Parent=HG03209_ch_T0000324;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000324;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9351715	9354511	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;gene_id=HG03209_ch_G0000119;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03209_ch_G0000119;Name=TSPY1
HG03209_chrY	CAT	transcript	9351715	9354511	100	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_G0000119;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03209_ch_T0000325;Name=TSPY1
HG03209_chrY	CAT	exon	9351715	9352246	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9351761	9352246	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9351761	9351763	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000325;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352247	9352853	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000325:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352854	9352931	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9352854	9352931	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352932	9353059	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000325:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353060	9353171	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353060	9353171	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353172	9353272	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000325:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353273	9353418	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353273	9353418	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353419	9353524	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000325:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353525	9353606	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353525	9353606	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353607	9354300	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000325:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9354301	9354511	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9354301	9354323	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000325:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9354321	9354323	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03209_ch_T0000325;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000325;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000325;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9351715	9354511	100	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_G0000119;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03209_ch_T0000326;Name=TSPY1
HG03209_chrY	CAT	exon	9351715	9352246	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9351761	9352246	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9351761	9351763	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000326;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352247	9352853	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000326:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352854	9352931	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9352854	9352931	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352932	9353059	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000326:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353060	9353171	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353060	9353171	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353172	9353272	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000326:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353273	9353418	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353273	9353418	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353419	9353513	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000326:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353514	9353606	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353514	9353576	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9353574	9353576	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000326;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353607	9354300	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000326:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9354301	9354511	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03209_ch_T0000326;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000326;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000326:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9351715	9354511	100	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_G0000119;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03209_ch_T0000327;Name=TSPY1
HG03209_chrY	CAT	exon	9351715	9352246	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9351761	9352246	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9351761	9351763	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000327;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352247	9352853	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000327:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352854	9352931	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9352854	9352931	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352932	9353059	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000327:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353060	9353171	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353060	9353171	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353172	9353279	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000327:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353280	9353418	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353280	9353418	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353419	9353524	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000327:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353525	9353606	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353525	9353576	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9353574	9353576	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000327;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353607	9354300	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000327:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9354301	9354511	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03209_ch_T0000327;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000327;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000327:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9351715	9354511	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_G0000119;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=HG03209_ch_T0000328;Name=TSPY1
HG03209_chrY	CAT	exon	9351715	9352246	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352247	9352853	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000328:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352854	9352931	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352932	9353059	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000328:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353060	9353171	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353172	9353279	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000328:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353280	9353418	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353419	9353513	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000328:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353514	9353606	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353607	9354300	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000328:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9354301	9354511	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03209_ch_T0000328;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000328;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000328:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9351715	9354511	100	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_G0000119;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03209_ch_T0000329;Name=TSPY1
HG03209_chrY	CAT	exon	9351715	9351847	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9351761	9351847	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9351761	9351763	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000329;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9351848	9352108	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352109	9352246	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9352109	9352246	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352247	9352853	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9352854	9352931	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9352854	9352931	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9352932	9353059	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353060	9353171	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353060	9353171	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353172	9353272	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353273	9353418	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353273	9353418	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353419	9353524	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9353525	9353606	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9353525	9353606	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9353607	9354300	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000329:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9354301	9354511	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000329:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9354301	9354323	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000329:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9354321	9354323	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03209_ch_T0000329;gene_id=HG03209_ch_G0000119;Parent=HG03209_ch_T0000329;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000329;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9363781	9369481	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_165;gene_id=HG03209_ch_G0000120;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000120;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9363781	9369481	1000	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_G0000120;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000330;Name=FAM197Y2
HG03209_chrY	CAT	exon	9363781	9363840	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9363841	9367393	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9367394	9367552	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9367553	9369058	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9369059	9369204	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9369205	9369290	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9369291	9369481	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG03209_ch_T0000330;gene_id=HG03209_ch_G0000120;Parent=HG03209_ch_T0000330;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000330:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9372005	9374802	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;gene_id=HG03209_ch_G0000121;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000121;Name=TSPY10
HG03209_chrY	CAT	transcript	9372005	9374802	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_G0000121;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03209_ch_T0000331;Name=TSPY10
HG03209_chrY	CAT	exon	9372005	9372536	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9372051	9372536	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9372051	9372053	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000331;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9372537	9373143	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000331:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373144	9373221	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373144	9373221	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373222	9373349	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000331:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373350	9373461	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373350	9373461	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373462	9373562	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000331:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373563	9373708	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373563	9373708	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373709	9373814	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000331:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373815	9373896	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373815	9373896	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373897	9374590	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000331:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9374591	9374802	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000331:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9374591	9374613	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000331:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9374611	9374613	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03209_ch_T0000331;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000331;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000331;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9372005	9374802	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_G0000121;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03209_ch_T0000332;Name=TSPY10
HG03209_chrY	CAT	exon	9372005	9372536	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9372051	9372536	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000332:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9372051	9372053	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000332;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9372537	9373143	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000332:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373144	9373221	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373144	9373221	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000332:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373222	9373349	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000332:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373350	9373461	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373350	9373461	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000332:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373462	9373562	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000332:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373563	9373708	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373563	9373708	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000332:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373709	9373803	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000332:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373804	9373896	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373804	9373866	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000332:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9373864	9373866	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000332;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373897	9374590	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000332:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9374591	9374802	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03209_ch_T0000332;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000332;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000332:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9372005	9374802	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_G0000121;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03209_ch_T0000333;Name=TSPY10
HG03209_chrY	CAT	exon	9372005	9372536	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9372051	9372536	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000333:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9372051	9372053	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000333;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9372537	9373143	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000333:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373144	9373221	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373144	9373221	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000333:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373222	9373349	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000333:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373350	9373461	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373350	9373461	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000333:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373462	9373569	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000333:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373570	9373708	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373570	9373708	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000333:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373709	9373814	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000333:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373815	9373896	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9373815	9373866	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000333:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9373864	9373866	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000333;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373897	9374590	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000333:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9374591	9374802	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03209_ch_T0000333;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000333;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000333:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9372005	9374802	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_G0000121;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG03209_ch_T0000334;Name=TSPY10
HG03209_chrY	CAT	exon	9372005	9372536	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9372537	9373143	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000334:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373144	9373221	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373222	9373349	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000334:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373350	9373461	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373462	9373569	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000334:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373570	9373708	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373709	9373803	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000334:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9373804	9373896	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9373897	9374590	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000334:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9374591	9374802	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03209_ch_T0000334;gene_id=HG03209_ch_G0000121;Parent=HG03209_ch_T0000334;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000334:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9384079	9389768	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_231;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;gene_id=HG03209_ch_G0000122;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000122;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9384079	9389768	1000	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_G0000122;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000335;Name=FAM197Y2
HG03209_chrY	CAT	exon	9384079	9384138	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000335:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9384139	9387688	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000335:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9387689	9387847	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000335:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9387848	9389345	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000335:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9389346	9389491	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000335:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9389492	9389577	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000335:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9389578	9389768	.	-	.	source_transcript=hg002_chrY_paternal_231.1;source_transcript_name=hg002_chrY_paternal_231.1;source_gene=hg002_chrY_paternal_231;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_231;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_231.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_231.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03209_ch_T0000335;gene_id=HG03209_ch_G0000122;Parent=HG03209_ch_T0000335;transcript_name=hg002_chrY_paternal_231.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000335:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9392293	9395089	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;gene_id=HG03209_ch_G0000123;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000123;Name=TSPY1
HG03209_chrY	CAT	transcript	9392293	9395089	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_G0000123;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03209_ch_T0000336;Name=TSPY1
HG03209_chrY	CAT	exon	9392293	9392824	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9392339	9392824	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9392339	9392341	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000336;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392825	9393431	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393432	9393509	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393432	9393509	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393510	9393637	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393638	9393749	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393638	9393749	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393750	9393850	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393851	9393996	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393851	9393996	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393997	9394091	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394092	9394184	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394092	9394154	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9394152	9394154	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000336;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9394185	9394878	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394879	9395089	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000336;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000336;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000336:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9392293	9395089	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_G0000123;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03209_ch_T0000337;Name=TSPY1
HG03209_chrY	CAT	exon	9392293	9392425	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9392339	9392425	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9392339	9392341	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000337;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392426	9392686	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9392687	9392824	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9392687	9392824	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392825	9393431	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393432	9393509	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393432	9393509	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393510	9393637	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393638	9393749	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393638	9393749	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393750	9393850	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393851	9393996	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393851	9393996	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393997	9394102	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394103	9394184	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394103	9394184	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9394185	9394878	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000337:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394879	9395089	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000337:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394879	9394901	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000337:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9394899	9394901	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000337;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000337;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000337;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9392293	9395089	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_G0000123;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03209_ch_T0000338;Name=TSPY1
HG03209_chrY	CAT	exon	9392293	9392824	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9392339	9392824	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9392339	9392341	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000338;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392825	9393431	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000338:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393432	9393509	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393432	9393509	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393510	9393637	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000338:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393638	9393749	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393638	9393749	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393750	9393850	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000338:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393851	9393996	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393851	9393996	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393997	9394102	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000338:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394103	9394184	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394103	9394184	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9394185	9394878	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000338:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394879	9395089	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000338:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394879	9394901	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000338:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9394899	9394901	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000338;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000338;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000338;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9392293	9395089	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_G0000123;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03209_ch_T0000339;Name=TSPY1
HG03209_chrY	CAT	exon	9392293	9392824	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9392339	9392824	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000339:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9392339	9392341	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000339;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392825	9393431	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000339:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393432	9393509	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393432	9393509	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000339:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393510	9393637	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000339:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393638	9393749	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393638	9393749	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000339:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393750	9393857	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000339:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393858	9393996	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9393858	9393996	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000339:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393997	9394102	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000339:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394103	9394184	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9394103	9394154	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000339:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9394152	9394154	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000339;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9394185	9394878	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000339:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394879	9395089	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000339;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000339;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000339:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9392293	9395089	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_G0000123;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG03209_ch_T0000340;Name=TSPY1
HG03209_chrY	CAT	exon	9392293	9392824	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9392825	9393431	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000340:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393432	9393509	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393510	9393637	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000340:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393638	9393749	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393750	9393857	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000340:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9393858	9393996	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9393997	9394091	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000340:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394092	9394184	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9394185	9394878	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000340:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9394879	9395089	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000340;gene_id=HG03209_ch_G0000123;Parent=HG03209_ch_T0000340;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000340:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9404368	9410056	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;gene_id=HG03209_ch_G0000124;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000124;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9404368	9410056	1000	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_G0000124;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000341;Name=FAM197Y2
HG03209_chrY	CAT	exon	9404368	9404427	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000341:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9404428	9407976	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000341:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9407977	9408135	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000341:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9408136	9409633	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000341:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9409634	9409779	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000341:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9409780	9409865	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000341:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9409866	9410056	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03209_ch_T0000341;gene_id=HG03209_ch_G0000124;Parent=HG03209_ch_T0000341;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000341:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9412580	9415394	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_222;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;gene_id=HG03209_ch_G0000125;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000125;Name=TSPY4
HG03209_chrY	CAT	transcript	9412580	9415394	100	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_G0000125;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03209_ch_T0000342;Name=TSPY4
HG03209_chrY	CAT	exon	9412580	9413129	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9412626	9413129	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9412626	9412628	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000342;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413130	9413736	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413737	9413814	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413737	9413814	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413815	9413942	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413943	9414054	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413943	9414054	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414055	9414155	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414156	9414301	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414156	9414301	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414302	9414407	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414408	9414489	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414408	9414489	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414490	9415183	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9415184	9415394	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000342:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9415184	9415206	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000342:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9415204	9415206	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000342;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000342;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000342;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9412580	9415394	100	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_G0000125;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03209_ch_T0000343;Name=TSPY4
HG03209_chrY	CAT	exon	9412580	9413129	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9412626	9413129	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9412626	9412628	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000343;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413130	9413736	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413737	9413814	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413737	9413814	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413815	9413942	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413943	9414054	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413943	9414054	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414055	9414155	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414156	9414301	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414156	9414301	.	+	2	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414302	9414396	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414397	9414489	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414397	9414459	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9414457	9414459	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000343;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414490	9415183	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9415184	9415394	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000343;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000343;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000343:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9412580	9415394	100	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_G0000125;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03209_ch_T0000344;Name=TSPY4
HG03209_chrY	CAT	exon	9412580	9413129	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9412626	9413129	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9412626	9412628	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000344;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413130	9413736	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413737	9413814	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413737	9413814	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413815	9413942	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413943	9414054	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9413943	9414054	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414055	9414162	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414163	9414301	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414163	9414301	.	+	2	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414302	9414407	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414408	9414489	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9414408	9414459	.	+	1	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9414457	9414459	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000344;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414490	9415183	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9415184	9415394	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000344;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000344;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000344:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9412580	9415394	1000	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_G0000125;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=HG03209_ch_T0000345;Name=TSPY4
HG03209_chrY	CAT	exon	9412580	9413129	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413130	9413736	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413737	9413814	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9413815	9413942	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9413943	9414054	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414055	9414162	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414163	9414301	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414302	9414396	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9414397	9414489	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9414490	9415183	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9415184	9415394	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000345;gene_id=HG03209_ch_G0000125;Parent=HG03209_ch_T0000345;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000345:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9424685	9430273	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;gene_id=HG03209_ch_G0000126;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG03209_ch_G0000126;Name=FAM197Y4
HG03209_chrY	CAT	transcript	9424685	9430273	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_G0000126;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG03209_ch_T0000346;Name=FAM197Y4
HG03209_chrY	CAT	exon	9424685	9424744	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03209_ch_T0000346:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9424745	9428293	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03209_ch_T0000346:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9428294	9428452	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03209_ch_T0000346:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9428453	9429939	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03209_ch_T0000346:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9429940	9430085	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03209_ch_T0000346:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9430086	9430171	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03209_ch_T0000346:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9430172	9430273	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03209_ch_T0000346;gene_id=HG03209_ch_G0000126;Parent=HG03209_ch_T0000346;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03209_ch_T0000346:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9432886	9435700	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;gene_id=HG03209_ch_G0000127;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03209_ch_G0000127;Name=TSPY4
HG03209_chrY	CAT	transcript	9432886	9435700	100	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_G0000127;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03209_ch_T0000347;Name=TSPY4
HG03209_chrY	CAT	exon	9432886	9433435	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9432932	9433435	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9432932	9432934	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000347;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9433436	9434042	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000347:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434043	9434120	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434043	9434120	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434121	9434248	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000347:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434249	9434360	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434249	9434360	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434361	9434461	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000347:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434462	9434607	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434462	9434607	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434608	9434713	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000347:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434714	9434795	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434714	9434795	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434796	9435489	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000347:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9435490	9435700	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000347:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9435490	9435512	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000347:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9435510	9435512	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03209_ch_T0000347;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000347;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000347;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9432886	9435700	100	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_G0000127;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03209_ch_T0000348;Name=TSPY4
HG03209_chrY	CAT	exon	9432886	9433435	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9432932	9433435	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9432932	9432934	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000348;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9433436	9434042	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000348:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434043	9434120	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434043	9434120	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434121	9434248	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000348:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434249	9434360	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434249	9434360	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434361	9434461	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000348:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434462	9434607	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434462	9434607	.	+	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434608	9434702	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000348:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434703	9434795	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434703	9434765	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9434763	9434765	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000348;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434796	9435489	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000348:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9435490	9435700	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03209_ch_T0000348;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000348;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000348:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9432886	9435700	100	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_G0000127;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03209_ch_T0000349;Name=TSPY4
HG03209_chrY	CAT	exon	9432886	9433435	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9432932	9433435	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000349:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9432932	9432934	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03209_ch_T0000349;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9433436	9434042	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000349:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434043	9434120	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434043	9434120	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000349:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434121	9434248	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000349:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434249	9434360	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434249	9434360	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000349:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434361	9434468	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000349:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434469	9434607	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434469	9434607	.	+	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000349:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434608	9434713	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000349:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434714	9434795	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9434714	9434765	.	+	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03209_ch_T0000349:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9434763	9434765	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03209_ch_T0000349;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434796	9435489	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03209_ch_T0000349:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9435490	9435700	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000349;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000349;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03209_ch_T0000349:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9432886	9435700	1000	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_G0000127;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG03209_ch_T0000350;Name=TSPY4
HG03209_chrY	CAT	exon	9432886	9433435	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9433436	9434042	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000350:0;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434043	9434120	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434121	9434248	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000350:1;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434249	9434360	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434361	9434468	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000350:2;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434469	9434607	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434608	9434702	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000350:3;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9434703	9434795	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9434796	9435489	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03209_ch_T0000350:4;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9435490	9435700	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03209_ch_T0000350;gene_id=HG03209_ch_G0000127;Parent=HG03209_ch_T0000350;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03209_ch_T0000350:5;Name=TSPY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9444970	9450574	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;gene_id=HG03209_ch_G0000128;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG03209_ch_G0000128;Name=FAM197Y6
HG03209_chrY	CAT	transcript	9444970	9450574	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_G0000128;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG03209_ch_T0000351;Name=FAM197Y6
HG03209_chrY	CAT	exon	9444970	9445029	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03209_ch_T0000351:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9445030	9448579	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03209_ch_T0000351:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9448580	9448738	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03209_ch_T0000351:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9448739	9450240	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03209_ch_T0000351:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9450241	9450386	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03209_ch_T0000351:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9450387	9450472	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03209_ch_T0000351:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9450473	9450574	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03209_ch_T0000351;gene_id=HG03209_ch_G0000128;Parent=HG03209_ch_T0000351;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03209_ch_T0000351:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9453187	9455983	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;gene_id=HG03209_ch_G0000129;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000129;Name=TSPY10
HG03209_chrY	CAT	transcript	9453187	9455983	10000	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_G0000129;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03209_ch_T0000352;Name=TSPY10
HG03209_chrY	CAT	exon	9453187	9453718	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9453233	9453718	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9453233	9453235	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000352;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9453719	9454325	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000352:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454326	9454403	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454326	9454403	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454404	9454531	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000352:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454532	9454643	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454532	9454643	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454644	9454744	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000352:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454745	9454890	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454745	9454890	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454891	9454996	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000352:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454997	9455078	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454997	9455078	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9455079	9455772	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000352:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9455773	9455983	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000352:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9455773	9455795	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000352:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9455793	9455795	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03209_ch_T0000352;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000352;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000352;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9453187	9455983	10000	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_G0000129;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03209_ch_T0000353;Name=TSPY10
HG03209_chrY	CAT	exon	9453187	9453718	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9453233	9453718	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9453233	9453235	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000353;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9453719	9454325	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454326	9454403	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454326	9454403	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454404	9454531	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454532	9454643	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454532	9454643	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454644	9454744	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454745	9454890	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454745	9454890	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454891	9454985	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454986	9455078	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454986	9455048	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9455046	9455048	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000353;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9455079	9455772	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9455773	9455983	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03209_ch_T0000353;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000353;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000353:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9453187	9455983	10000	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_G0000129;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03209_ch_T0000354;Name=TSPY10
HG03209_chrY	CAT	exon	9453187	9453718	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9453233	9453718	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9453233	9453235	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000354;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9453719	9454325	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454326	9454403	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454326	9454403	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454404	9454531	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454532	9454643	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454532	9454643	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454644	9454751	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454752	9454890	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454752	9454890	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454891	9454996	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454997	9455078	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9454997	9455048	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9455046	9455048	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000354;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9455079	9455772	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9455773	9455983	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03209_ch_T0000354;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000354;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000354:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9453187	9455983	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_G0000129;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG03209_ch_T0000355;Name=TSPY10
HG03209_chrY	CAT	exon	9453187	9453718	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9453719	9454325	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000355:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454326	9454403	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454404	9454531	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000355:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454532	9454643	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454644	9454751	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000355:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454752	9454890	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9454891	9454985	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000355:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9454986	9455078	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9455079	9455772	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000355:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9455773	9455983	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03209_ch_T0000355;gene_id=HG03209_ch_G0000129;Parent=HG03209_ch_T0000355;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000355:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9465281	9470963	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;gene_id=HG03209_ch_G0000130;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000130;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9465281	9470963	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_G0000130;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000356;Name=FAM197Y2
HG03209_chrY	CAT	exon	9465281	9465340	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000356:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9465341	9468887	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000356:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9468888	9469046	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000356:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9469047	9470540	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000356:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9470541	9470686	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000356:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9470687	9470772	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000356:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9470773	9470963	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1,hg002_chrY_paternal_227.1;transcript_id=HG03209_ch_T0000356;gene_id=HG03209_ch_G0000130;Parent=HG03209_ch_T0000356;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000356:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9473488	9476284	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;gene_id=HG03209_ch_G0000131;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000131;Name=TSPY1
HG03209_chrY	CAT	transcript	9473488	9476284	100	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_G0000131;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03209_ch_T0000357;Name=TSPY1
HG03209_chrY	CAT	exon	9473488	9474019	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9473534	9474019	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9473534	9473536	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000357;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474020	9474626	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000357:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474627	9474704	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474627	9474704	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474705	9474832	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000357:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474833	9474944	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474833	9474944	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474945	9475045	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000357:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475046	9475191	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475046	9475191	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475192	9475297	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000357:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475298	9475379	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475298	9475379	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475380	9476073	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000357:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9476074	9476284	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000357:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9476074	9476096	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000357:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9476094	9476096	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000357;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000357;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000357;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9473488	9476284	100	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_G0000131;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03209_ch_T0000358;Name=TSPY1
HG03209_chrY	CAT	exon	9473488	9474019	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9473534	9474019	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9473534	9473536	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474020	9474626	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474627	9474704	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474627	9474704	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474705	9474832	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474833	9474944	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474833	9474944	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474945	9475045	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475046	9475191	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475046	9475191	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475192	9475286	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475287	9475379	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475287	9475349	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9475347	9475349	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475380	9476073	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9476074	9476284	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000358;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000358:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9473488	9476284	100	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_G0000131;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03209_ch_T0000359;Name=TSPY1
HG03209_chrY	CAT	exon	9473488	9474019	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9473534	9474019	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9473534	9473536	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474020	9474626	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474627	9474704	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474627	9474704	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474705	9474832	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474833	9474944	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474833	9474944	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474945	9475052	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475053	9475191	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475053	9475191	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475192	9475297	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475298	9475379	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475298	9475349	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9475347	9475349	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475380	9476073	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9476074	9476284	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000359;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9473488	9476284	100	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_G0000131;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03209_ch_T0000360;Name=TSPY1
HG03209_chrY	CAT	exon	9473488	9473620	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9473534	9473620	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9473534	9473536	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9473621	9473881	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9473882	9474019	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9473882	9474019	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474020	9474626	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474627	9474704	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474627	9474704	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474705	9474832	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474833	9474944	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9474833	9474944	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474945	9475045	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475046	9475191	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475046	9475191	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475192	9475297	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475298	9475379	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9475298	9475379	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475380	9476073	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9476074	9476284	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000360:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9476074	9476096	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000360:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9476094	9476096	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000360;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9473488	9476284	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_G0000131;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG03209_ch_T0000361;Name=TSPY1
HG03209_chrY	CAT	exon	9473488	9474019	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474020	9474626	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474627	9474704	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474705	9474832	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9474833	9474944	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9474945	9475052	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475053	9475191	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475192	9475286	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9475287	9475379	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9475380	9476073	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03209_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9476074	9476284	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000361;gene_id=HG03209_ch_G0000131;Parent=HG03209_ch_T0000361;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03209_ch_T0000361:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9485573	9491257	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;gene_id=HG03209_ch_G0000132;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000132;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9485573	9491257	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_G0000132;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000362;Name=FAM197Y2
HG03209_chrY	CAT	exon	9485573	9485632	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000362:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9485633	9489181	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000362:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9489182	9489340	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000362:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9489341	9490834	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000362:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9490835	9490980	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000362:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9490981	9491066	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000362:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9491067	9491257	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03209_ch_T0000362;gene_id=HG03209_ch_G0000132;Parent=HG03209_ch_T0000362;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000362:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9493781	9496577	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_230.2;gene_id=HG03209_ch_G0000133;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03209_ch_G0000133;Name=TSPY1
HG03209_chrY	CAT	transcript	9493781	9496577	10000	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_G0000133;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03209_ch_T0000363;Name=TSPY1
HG03209_chrY	CAT	exon	9493781	9493913	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9493827	9493913	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9493827	9493829	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000363;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9493914	9494174	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9494175	9494312	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9494175	9494312	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9494313	9494919	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9494920	9494997	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9494920	9494997	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9494998	9495125	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9495126	9495237	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9495126	9495237	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9495238	9495338	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9495339	9495484	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9495339	9495484	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9495485	9495590	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9495591	9495672	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9495591	9495672	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9495673	9496366	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9496367	9496577	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000363:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9496367	9496389	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000363:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9496387	9496389	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000363;gene_id=HG03209_ch_G0000133;Parent=HG03209_ch_T0000363;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000363;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9505848	9511537	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_183;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;gene_id=HG03209_ch_G0000134;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000134;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9505848	9511537	1000	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_G0000134;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000364;Name=FAM197Y2
HG03209_chrY	CAT	exon	9505848	9505907	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000364:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9505908	9509457	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000364:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9509458	9509616	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000364:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9509617	9511114	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000364:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9511115	9511260	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000364:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9511261	9511346	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000364:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9511347	9511537	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03209_ch_T0000364;gene_id=HG03209_ch_G0000134;Parent=HG03209_ch_T0000364;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000364:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9514061	9516857	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_232.2;gene_id=HG03209_ch_G0000135;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03209_ch_G0000135;Name=TSPY1
HG03209_chrY	CAT	transcript	9514061	9516857	9960	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_G0000135;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03209_ch_T0000365;Name=TSPY1
HG03209_chrY	CAT	exon	9514061	9514193	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9514107	9514193	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9514107	9514109	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03209_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9514194	9514454	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9514455	9514592	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9514455	9514592	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9514593	9515199	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9515200	9515277	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9515200	9515277	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9515278	9515405	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9515406	9515517	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9515406	9515517	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9515518	9515618	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9515619	9515764	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9515619	9515764	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9515765	9515870	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9515871	9515952	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9515871	9515952	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9515953	9516646	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03209_ch_T0000365:5;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9516647	9516857	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03209_ch_T0000365:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9516647	9516669	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03209_ch_T0000365:6;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9516667	9516669	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000365;gene_id=HG03209_ch_G0000135;Parent=HG03209_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03209_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9526128	9531815	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_219;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=HG03209_ch_G0000136;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000136;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9526128	9531815	1000	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_G0000136;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000366;Name=FAM197Y2
HG03209_chrY	CAT	exon	9526128	9526187	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000366:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9526188	9529737	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000366:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9529738	9529896	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000366:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9529897	9531392	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000366:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9531393	9531538	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000366:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9531539	9531624	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000366:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9531625	9531815	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03209_ch_T0000366;gene_id=HG03209_ch_G0000136;Parent=HG03209_ch_T0000366;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000366:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9534339	9537136	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;gene_id=HG03209_ch_G0000137;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03209_ch_G0000137;Name=TSPY10
HG03209_chrY	CAT	transcript	9534339	9537136	100	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_G0000137;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03209_ch_T0000367;Name=TSPY10
HG03209_chrY	CAT	exon	9534339	9534870	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9534385	9534870	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9534385	9534387	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000367;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9534871	9535477	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535478	9535555	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535478	9535555	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535556	9535683	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535684	9535795	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535684	9535795	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535796	9535896	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535897	9536042	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535897	9536042	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536043	9536148	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536149	9536230	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9536149	9536230	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536231	9536924	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536925	9537136	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000367:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9536925	9536947	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000367:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9536945	9536947	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;transcript_id=HG03209_ch_T0000367;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000367;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000367;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9534339	9537136	100	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_G0000137;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03209_ch_T0000368;Name=TSPY10
HG03209_chrY	CAT	exon	9534339	9534870	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9534385	9534870	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9534385	9534387	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9534871	9535477	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535478	9535555	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535478	9535555	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535556	9535683	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535684	9535795	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535684	9535795	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535796	9535896	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535897	9536042	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535897	9536042	.	+	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536043	9536137	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536138	9536230	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9536138	9536200	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9536198	9536200	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536231	9536924	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536925	9537136	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;transcript_id=HG03209_ch_T0000368;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000368;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000368:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9534339	9537136	100	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_G0000137;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03209_ch_T0000369;Name=TSPY10
HG03209_chrY	CAT	exon	9534339	9534870	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9534385	9534870	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9534385	9534387	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000369;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9534871	9535477	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535478	9535555	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535478	9535555	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535556	9535683	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535684	9535795	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535684	9535795	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535796	9535903	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535904	9536042	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9535904	9536042	.	+	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536043	9536148	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536149	9536230	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9536149	9536200	.	+	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9536198	9536200	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000369;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536231	9536924	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536925	9537136	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;transcript_id=HG03209_ch_T0000369;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000369;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000369:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9534339	9537136	1000	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_G0000137;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG03209_ch_T0000370;Name=TSPY10
HG03209_chrY	CAT	exon	9534339	9534870	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9534871	9535477	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000370:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535478	9535555	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535556	9535683	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000370:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535684	9535795	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9535796	9535903	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000370:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9535904	9536042	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536043	9536137	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000370:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536138	9536230	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9536231	9536924	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000370:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9536925	9537136	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;transcript_id=HG03209_ch_T0000370;gene_id=HG03209_ch_G0000137;Parent=HG03209_ch_T0000370;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000370:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9546432	9552121	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;gene_id=HG03209_ch_G0000138;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03209_ch_G0000138;Name=FAM197Y2
HG03209_chrY	CAT	transcript	9546432	9552121	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_G0000138;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG03209_ch_T0000371;Name=FAM197Y2
HG03209_chrY	CAT	exon	9546432	9546491	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000371:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9546492	9550041	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000371:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9550042	9550200	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000371:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9550201	9551698	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000371:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9551699	9551844	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000371:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9551845	9551930	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03209_ch_T0000371:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9551931	9552121	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03209_ch_T0000371;gene_id=HG03209_ch_G0000138;Parent=HG03209_ch_T0000371;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03209_ch_T0000371:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9554645	9557441	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;gene_id=HG03209_ch_G0000139;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000139;Name=TSPY10P
HG03209_chrY	CAT	transcript	9554645	9557441	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_G0000139;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03209_ch_T0000372;Name=TSPY10P
HG03209_chrY	CAT	exon	9554645	9555176	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9554691	9555176	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9554691	9554693	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03209_ch_T0000372;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555177	9555783	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555784	9555861	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555784	9555861	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555862	9555989	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555990	9556101	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555990	9556101	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556102	9556202	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556203	9556348	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9556203	9556237	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9556235	9556237	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03209_ch_T0000372;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556349	9556454	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556455	9556536	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556537	9557230	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000372:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9557231	9557441	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000372;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000372:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9554645	9557441	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_G0000139;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03209_ch_T0000373;Name=TSPY10P
HG03209_chrY	CAT	exon	9554645	9555176	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9554691	9555176	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9554691	9554693	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03209_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555177	9555783	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555784	9555861	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555784	9555861	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555862	9555989	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555990	9556101	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555990	9556101	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556102	9556202	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556203	9556348	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9556203	9556237	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9556235	9556237	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03209_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556349	9556443	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556444	9556536	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556537	9557230	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9557231	9557441	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000373;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000373:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9554645	9557441	1000	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_G0000139;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03209_ch_T0000374;Name=TSPY10P
HG03209_chrY	CAT	exon	9554645	9555176	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9554691	9555176	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9554691	9554693	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03209_ch_T0000374;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555177	9555783	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555784	9555861	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555784	9555861	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555862	9555989	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555990	9556101	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9555990	9556101	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556102	9556209	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556210	9556348	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9556210	9556348	.	+	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556349	9556454	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556455	9556536	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9556455	9556506	.	+	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03209_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9556504	9556506	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03209_ch_T0000374;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556537	9557230	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9557231	9557441	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000374;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000374:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9554645	9557441	1000	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_G0000139;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03209_ch_T0000375;Name=TSPY10P
HG03209_chrY	CAT	exon	9554645	9555176	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555177	9555783	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000375:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555784	9555861	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9555862	9555989	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000375:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9555990	9556101	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556102	9556209	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000375:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556210	9556348	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556349	9556443	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000375:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9556444	9556536	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9556537	9557230	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03209_ch_T0000375:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9557231	9557441	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000375;gene_id=HG03209_ch_G0000139;Parent=HG03209_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03209_ch_T0000375:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9566760	9572370	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;gene_id=HG03209_ch_G0000140;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000140;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9566760	9572370	1000	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_G0000140;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000376;Name=FAM197Y3
HG03209_chrY	CAT	exon	9566760	9566819	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000376:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9566820	9570368	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000376:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9570369	9570527	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000376:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9570528	9572036	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000376:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9572037	9572182	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000376:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9572183	9572268	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000376:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9572269	9572370	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03209_ch_T0000376;gene_id=HG03209_ch_G0000140;Parent=HG03209_ch_T0000376;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000376:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9574983	9577779	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;gene_id=HG03209_ch_G0000141;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000141;Name=TSPY10
HG03209_chrY	CAT	transcript	9574983	9577779	100	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_G0000141;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03209_ch_T0000377;Name=TSPY10
HG03209_chrY	CAT	exon	9574983	9575514	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9575029	9575514	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9575029	9575031	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000377;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9575515	9576121	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576122	9576199	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576122	9576199	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576200	9576327	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576328	9576439	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576328	9576439	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576440	9576540	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576541	9576686	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576541	9576686	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576687	9576792	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576793	9576874	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576793	9576874	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576875	9577568	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9577569	9577779	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000377:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9577569	9577591	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000377:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9577589	9577591	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000377;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000377;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9574983	9577779	100	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_G0000141;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03209_ch_T0000378;Name=TSPY10
HG03209_chrY	CAT	exon	9574983	9575514	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9575029	9575514	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9575029	9575031	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9575515	9576121	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576122	9576199	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576122	9576199	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576200	9576327	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576328	9576439	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576328	9576439	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576440	9576540	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576541	9576686	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576541	9576686	.	+	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576687	9576781	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576782	9576874	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576782	9576844	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9576842	9576844	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576875	9577568	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9577569	9577779	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000378;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000378:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9574983	9577779	100	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_G0000141;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03209_ch_T0000379;Name=TSPY10
HG03209_chrY	CAT	exon	9574983	9575514	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9575029	9575514	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9575029	9575031	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03209_ch_T0000379;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9575515	9576121	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576122	9576199	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576122	9576199	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576200	9576327	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576328	9576439	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576328	9576439	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576440	9576547	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576548	9576686	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576548	9576686	.	+	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576687	9576792	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576793	9576874	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9576793	9576844	.	+	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03209_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9576842	9576844	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03209_ch_T0000379;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576875	9577568	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03209_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9577569	9577779	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000379;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03209_ch_T0000379:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9574983	9577779	1000	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_G0000141;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=HG03209_ch_T0000380;Name=TSPY10
HG03209_chrY	CAT	exon	9574983	9575514	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9575515	9576121	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000380:0;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576122	9576199	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576200	9576327	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000380:1;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576328	9576439	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576440	9576547	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000380:2;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576548	9576686	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576687	9576781	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000380:3;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9576782	9576874	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9576875	9577568	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03209_ch_T0000380:4;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9577569	9577779	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000380;gene_id=HG03209_ch_G0000141;Parent=HG03209_ch_T0000380;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03209_ch_T0000380:5;Name=TSPY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9587087	9592674	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;gene_id=HG03209_ch_G0000142;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03209_ch_G0000142;Name=FAM197Y3
HG03209_chrY	CAT	transcript	9587087	9592674	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_G0000142;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG03209_ch_T0000381;Name=FAM197Y3
HG03209_chrY	CAT	exon	9587087	9587146	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000381:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9587147	9590692	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000381:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9590693	9590851	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000381:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9590852	9592340	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000381:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9592341	9592486	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000381:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9592487	9592572	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03209_ch_T0000381:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9592573	9592674	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03209_ch_T0000381;gene_id=HG03209_ch_G0000142;Parent=HG03209_ch_T0000381;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03209_ch_T0000381:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9595287	9598099	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=HG03209_ch_G0000143;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000143;Name=TSPY9
HG03209_chrY	CAT	transcript	9595287	9598099	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_G0000143;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03209_ch_T0000382;Name=TSPY9
HG03209_chrY	CAT	exon	9595287	9595836	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9595333	9595836	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9595333	9595335	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03209_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9595837	9596443	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596444	9596521	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596444	9596521	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9596522	9596649	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596650	9596761	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596650	9596761	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9596762	9596862	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596863	9597008	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596863	9597008	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9597009	9597114	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9597115	9597196	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9597115	9597196	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9597197	9597888	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9597889	9598099	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000382:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9597889	9597911	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000382:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9597909	9597911	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000382;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03209_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9595287	9598099	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_G0000143;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03209_ch_T0000383;Name=TSPY9
HG03209_chrY	CAT	exon	9595287	9595836	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9595333	9595836	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9595333	9595335	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03209_ch_T0000383;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9595837	9596443	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596444	9596521	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596444	9596521	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9596522	9596649	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596650	9596761	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596650	9596761	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9596762	9596862	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9596863	9597008	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9596863	9597008	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9597009	9597103	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9597104	9597196	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9597104	9597166	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03209_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9597164	9597166	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03209_ch_T0000383;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9597197	9597888	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03209_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9597889	9598099	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000383;gene_id=HG03209_ch_G0000143;Parent=HG03209_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03209_ch_T0000383:5;Name=TSPY9;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9678155	9682587	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=HG03209_ch_G0000144;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG03209_ch_G0000144;Name=RBMY3AP
HG03209_chrY	CAT	transcript	9678155	9682587	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_G0000144;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG03209_ch_T0000384;Name=RBMY3AP
HG03209_chrY	CAT	exon	9678155	9678305	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_T0000384;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03209_ch_T0000384:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9678306	9682215	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_T0000384;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03209_ch_T0000384:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9682216	9682317	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_T0000384;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03209_ch_T0000384:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9682318	9682523	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_T0000384;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03209_ch_T0000384:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9682524	9682587	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03209_ch_T0000384;gene_id=HG03209_ch_G0000144;Parent=HG03209_ch_T0000384;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03209_ch_T0000384:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9758530	9761129	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=HG03209_ch_G0000145;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG03209_ch_G0000145;Name=TTTY8
HG03209_chrY	CAT	transcript	9758530	9761129	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_G0000145;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG03209_ch_T0000385;Name=TTTY8
HG03209_chrY	CAT	exon	9758530	9758665	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_T0000385;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03209_ch_T0000385:0;Name=TTTY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9758666	9759142	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_T0000385;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03209_ch_T0000385:0;Name=TTTY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9759143	9759347	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_T0000385;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03209_ch_T0000385:1;Name=TTTY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9759348	9760939	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_T0000385;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03209_ch_T0000385:1;Name=TTTY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9760940	9761129	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03209_ch_T0000385;gene_id=HG03209_ch_G0000145;Parent=HG03209_ch_T0000385;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03209_ch_T0000385:2;Name=TTTY8;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9774254	9782692	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=HG03209_ch_G0000146;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG03209_ch_G0000146;Name=TTTY7B
HG03209_chrY	CAT	transcript	9774254	9782692	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_G0000146;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG03209_ch_T0000386;Name=TTTY7B
HG03209_chrY	CAT	exon	9774254	9774499	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9774500	9775974	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03209_ch_T0000386:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9775975	9776088	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9776089	9778005	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03209_ch_T0000386:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9778006	9778482	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9778483	9779170	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03209_ch_T0000386:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9779171	9779245	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9779246	9781552	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03209_ch_T0000386:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9781553	9781714	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9781715	9782655	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03209_ch_T0000386:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9782656	9782692	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03209_ch_T0000386;gene_id=HG03209_ch_G0000146;Parent=HG03209_ch_T0000386;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03209_ch_T0000386:5;Name=TTTY7B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9785083	9788726	.	-	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=HG03209_ch_G0000147;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG03209_ch_G0000147;Name=TTTY21
HG03209_chrY	CAT	transcript	9785083	9788726	1000	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03209_ch_T0000387;gene_id=HG03209_ch_G0000147;Parent=HG03209_ch_G0000147;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG03209_ch_T0000387;Name=TTTY21
HG03209_chrY	CAT	exon	9785083	9785187	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03209_ch_T0000387;gene_id=HG03209_ch_G0000147;Parent=HG03209_ch_T0000387;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03209_ch_T0000387:0;Name=TTTY21;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9785188	9788524	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03209_ch_T0000387;gene_id=HG03209_ch_G0000147;Parent=HG03209_ch_T0000387;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG03209_ch_T0000387:0;Name=TTTY21;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9788525	9788726	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03209_ch_T0000387;gene_id=HG03209_ch_G0000147;Parent=HG03209_ch_T0000387;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03209_ch_T0000387:1;Name=TTTY21;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9803716	9825916	.	+	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=HG03209_ch_G0000148;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG03209_ch_G0000148;Name=TTTY2
HG03209_chrY	CAT	transcript	9803716	9825916	1000	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_G0000148;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG03209_ch_T0000388;Name=TTTY2
HG03209_chrY	CAT	exon	9803716	9803920	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:0;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9803921	9809753	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:0;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9809754	9809831	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:1;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9809832	9812307	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:1;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9812308	9812394	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:2;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9812395	9819788	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:2;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9819789	9819937	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:3;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9819938	9820629	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:3;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9820630	9820786	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:4;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9820787	9823616	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:4;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9823617	9823695	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:5;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9823696	9823815	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:5;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9823816	9824013	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:6;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9824014	9825236	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03209_ch_T0000388:6;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9825237	9825916	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03209_ch_T0000388;gene_id=HG03209_ch_G0000148;Parent=HG03209_ch_T0000388;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03209_ch_T0000388:7;Name=TTTY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9820596	9841759	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=HG03209_ch_G0000149;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG03209_ch_G0000149;Name=TTTY1B
HG03209_chrY	CAT	transcript	9820596	9841759	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_G0000149;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG03209_ch_T0000389;Name=TTTY1B
HG03209_chrY	CAT	exon	9820596	9820853	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03209_ch_T0000389:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9820854	9828434	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03209_ch_T0000389:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9828435	9828572	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03209_ch_T0000389:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9828573	9830928	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03209_ch_T0000389:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9830929	9831037	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03209_ch_T0000389:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9831038	9837900	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03209_ch_T0000389:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9837901	9838060	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03209_ch_T0000389:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9838061	9841484	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03209_ch_T0000389:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9841485	9841759	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03209_ch_T0000389;gene_id=HG03209_ch_G0000149;Parent=HG03209_ch_T0000389;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03209_ch_T0000389:4;Name=TTTY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9862240	9865651	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;gene_id=HG03209_ch_G0000150;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG03209_ch_G0000150;Name=LOC107987353
HG03209_chrY	CAT	transcript	9862240	9865651	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_G0000150;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG03209_ch_T0000390;Name=LOC107987353
HG03209_chrY	CAT	exon	9862240	9862408	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_T0000390;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03209_ch_T0000390:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9862409	9862784	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_T0000390;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03209_ch_T0000390:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9862785	9862857	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_T0000390;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03209_ch_T0000390:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9862858	9865388	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_T0000390;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03209_ch_T0000390:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9865389	9865651	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03209_ch_T0000390;gene_id=HG03209_ch_G0000150;Parent=HG03209_ch_T0000390;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03209_ch_T0000390:2;Name=LOC107987353;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9870747	9874941	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=HG03209_ch_G0000151;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03209_ch_G0000151;Name=LINC00280
HG03209_chrY	CAT	transcript	9870747	9874941	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_G0000151;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG03209_ch_T0000391;Name=LINC00280
HG03209_chrY	CAT	exon	9870747	9870832	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_T0000391;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000391:0;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9870833	9873333	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_T0000391;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03209_ch_T0000391:0;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9873334	9873476	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_T0000391;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000391:1;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9873477	9874722	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_T0000391;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03209_ch_T0000391:1;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9874723	9874941	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03209_ch_T0000391;gene_id=HG03209_ch_G0000151;Parent=HG03209_ch_T0000391;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03209_ch_T0000391:2;Name=LINC00280;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9968262	9973867	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;gene_id=HG03209_ch_G0000152;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG03209_ch_G0000152;Name=FAM197Y9
HG03209_chrY	CAT	transcript	9968262	9973867	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_G0000152;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG03209_ch_T0000392;Name=FAM197Y9
HG03209_chrY	CAT	exon	9968262	9968363	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03209_ch_T0000392:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9968364	9968449	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03209_ch_T0000392:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9968450	9968595	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03209_ch_T0000392:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9968596	9970097	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03209_ch_T0000392:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9970098	9970256	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03209_ch_T0000392:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9970257	9973807	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03209_ch_T0000392:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9973808	9973867	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03209_ch_T0000392;gene_id=HG03209_ch_G0000152;Parent=HG03209_ch_T0000392;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03209_ch_T0000392:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9983186	9985981	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;gene_id=HG03209_ch_G0000153;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000153;Name=TSPY2
HG03209_chrY	CAT	transcript	9983186	9985981	100	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_G0000153;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03209_ch_T0000393;Name=TSPY2
HG03209_chrY	CAT	exon	9983186	9983401	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9983379	9983401	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9983379	9983381	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03209_ch_T0000393;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9983402	9984095	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984096	9984177	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984096	9984177	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984178	9984283	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984284	9984429	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984284	9984429	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984430	9984530	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984531	9984642	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984531	9984642	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984643	9984770	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984771	9984848	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984771	9984848	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984849	9985449	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9985450	9985981	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000393:5;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9985450	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000393:5;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9985933	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000393;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03209_ch_T0000393;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9983186	9985981	100	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_G0000153;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03209_ch_T0000394;Name=TSPY2
HG03209_chrY	CAT	exon	9983186	9983401	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9983402	9984095	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984096	9984188	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984126	9984188	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9984126	9984128	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03209_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984189	9984283	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984284	9984429	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984284	9984429	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984430	9984530	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984531	9984642	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984531	9984642	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984643	9984770	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984771	9984848	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984771	9984848	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984849	9985449	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9985450	9985981	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000394:5;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9985450	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9985933	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000394;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03209_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9983186	9985981	100	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_G0000153;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03209_ch_T0000395;Name=TSPY2
HG03209_chrY	CAT	exon	9983186	9983401	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9983402	9984095	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984096	9984177	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984126	9984177	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	9984126	9984128	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03209_ch_T0000395;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984178	9984283	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984284	9984422	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984284	9984422	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984423	9984530	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984531	9984642	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984531	9984642	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984643	9984770	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984771	9984848	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9984771	9984848	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984849	9985449	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03209_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9985450	9985981	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03209_ch_T0000395:5;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	9985450	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03209_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	9985933	9985935	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000395;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03209_ch_T0000395;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	9983186	9985981	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_G0000153;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG03209_ch_T0000396;Name=TSPY2
HG03209_chrY	CAT	exon	9983186	9983401	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9983402	9984095	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03209_ch_T0000396:0;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984096	9984188	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984189	9984283	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03209_ch_T0000396:1;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984284	9984422	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984423	9984530	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03209_ch_T0000396:2;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984531	9984642	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984643	9984770	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03209_ch_T0000396:3;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9984771	9984848	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9984849	9985449	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03209_ch_T0000396:4;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9985450	9985981	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000396;gene_id=HG03209_ch_G0000153;Parent=HG03209_ch_T0000396;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03209_ch_T0000396:5;Name=TSPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	9988594	9989758	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=HG03209_ch_G0000154;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG03209_ch_G0000154;Name=TTTY23B
HG03209_chrY	CAT	transcript	9988594	9989758	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_G0000154;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG03209_ch_T0000397;Name=TTTY23B
HG03209_chrY	CAT	exon	9988594	9988650	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_T0000397;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03209_ch_T0000397:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9988651	9988763	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_T0000397;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03209_ch_T0000397:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9988764	9988909	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_T0000397;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03209_ch_T0000397:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	9988910	9989449	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_T0000397;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03209_ch_T0000397:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	9989450	9989758	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03209_ch_T0000397;gene_id=HG03209_ch_G0000154;Parent=HG03209_ch_T0000397;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03209_ch_T0000397:2;Name=TTTY23B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	11738883	11741897	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG03209_ch_G0000155;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG03209_ch_G0000155;Name=LOC124904996
HG03209_chrY	CAT	transcript	11738883	11741897	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03209_ch_T0000398;gene_id=HG03209_ch_G0000155;Parent=HG03209_ch_G0000155;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG03209_ch_T0000398;Name=LOC124904996
HG03209_chrY	CAT	exon	11738883	11740148	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03209_ch_T0000398;gene_id=HG03209_ch_G0000155;Parent=HG03209_ch_T0000398;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03209_ch_T0000398:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	11740149	11741475	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03209_ch_T0000398;gene_id=HG03209_ch_G0000155;Parent=HG03209_ch_T0000398;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG03209_ch_T0000398:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	11741476	11741897	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03209_ch_T0000398;gene_id=HG03209_ch_G0000155;Parent=HG03209_ch_T0000398;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03209_ch_T0000398:1;Name=LOC124904996;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	11824427	11832783	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG03209_ch_G0000156;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG03209_ch_G0000156;Name=LOC105379273
HG03209_chrY	CAT	transcript	11824427	11832783	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_G0000156;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG03209_ch_T0000399;Name=LOC105379273
HG03209_chrY	CAT	exon	11824427	11824468	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_T0000399;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03209_ch_T0000399:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	11824469	11830529	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_T0000399;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03209_ch_T0000399:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	11830530	11830588	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_T0000399;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03209_ch_T0000399:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	11830589	11832723	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_T0000399;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03209_ch_T0000399:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	11832724	11832783	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03209_ch_T0000399;gene_id=HG03209_ch_G0000156;Parent=HG03209_ch_T0000399;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03209_ch_T0000399:2;Name=LOC105379273;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	13736657	13744271	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=HG03209_ch_G0000157;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG03209_ch_G0000157;Name=LOC112268312
HG03209_chrY	CAT	transcript	13736657	13743208	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_G0000157;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000400;Name=LOC112268312
HG03209_chrY	CAT	exon	13736657	13736746	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000400:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13736747	13736932	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000400:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13736933	13737094	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000400:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13737095	13743072	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000400:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13743073	13743208	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000400;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000400:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	13736657	13744271	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_G0000157;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000401;Name=LOC112268312
HG03209_chrY	CAT	exon	13736657	13736746	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13736747	13736932	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13736933	13737094	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13737095	13743072	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13743073	13744271	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000401;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000401:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	13736780	13744271	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_G0000157;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000402;Name=LOC112268312
HG03209_chrY	CAT	exon	13736780	13736798	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000402:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13736799	13736932	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000402:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13736933	13737094	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000402:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13737095	13743072	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000402:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13743073	13744271	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03209_ch_T0000402;gene_id=HG03209_ch_G0000157;Parent=HG03209_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000402:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	13779453	13788387	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG03209_ch_G0000158;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG03209_ch_G0000158;Name=LOC107987343
HG03209_chrY	CAT	transcript	13779453	13788387	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_G0000158;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG03209_ch_T0000403;Name=LOC107987343
HG03209_chrY	CAT	exon	13779453	13780845	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_T0000403;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03209_ch_T0000403:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13780846	13783407	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_T0000403;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03209_ch_T0000403:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13783408	13783534	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_T0000403;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03209_ch_T0000403:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13783535	13786491	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_T0000403;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03209_ch_T0000403:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13786492	13788387	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03209_ch_T0000403;gene_id=HG03209_ch_G0000158;Parent=HG03209_ch_T0000403;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03209_ch_T0000403:2;Name=LOC107987343;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	13830972	13846446	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG03209_ch_G0000159;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG03209_ch_G0000159;Name=GYG2P1
HG03209_chrY	CAT	transcript	13830972	13846446	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_G0000159;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG03209_ch_T0000404;Name=GYG2P1
HG03209_chrY	CAT	exon	13830972	13831356	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03209_ch_T0000404:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13831357	13831651	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03209_ch_T0000404:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13831652	13831793	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03209_ch_T0000404:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13831794	13832048	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03209_ch_T0000404:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13832049	13832165	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03209_ch_T0000404:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13832166	13845171	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03209_ch_T0000404:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13845172	13845310	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03209_ch_T0000404:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	13845311	13846405	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03209_ch_T0000404:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	13846406	13846446	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03209_ch_T0000404;gene_id=HG03209_ch_G0000159;Parent=HG03209_ch_T0000404;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03209_ch_T0000404:4;Name=GYG2P1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14086377	14088544	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG03209_ch_G0000160;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG03209_ch_G0000160;Name=LOC112268311
HG03209_chrY	CAT	transcript	14086377	14088544	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03209_ch_T0000405;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_G0000160;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03209_ch_T0000405;Name=LOC112268311
HG03209_chrY	CAT	exon	14086377	14087812	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03209_ch_T0000405;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03209_ch_T0000405:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087813	14088421	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03209_ch_T0000405;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03209_ch_T0000405:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14088422	14088544	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03209_ch_T0000405;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03209_ch_T0000405:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14086377	14088553	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03209_ch_T0000406;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_G0000160;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03209_ch_T0000406;Name=LOC112268311
HG03209_chrY	CAT	exon	14086377	14087812	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03209_ch_T0000406;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03209_ch_T0000406:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087813	14088364	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03209_ch_T0000406;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03209_ch_T0000406:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14088365	14088553	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03209_ch_T0000406;gene_id=HG03209_ch_G0000160;Parent=HG03209_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03209_ch_T0000406:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14087413	14117292	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG03209_ch_G0000161;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG03209_ch_G0000161;Name=TTTY15
HG03209_chrY	CAT	transcript	14087413	14117292	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_G0000161;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03209_ch_T0000407;Name=TTTY15
HG03209_chrY	CAT	exon	14087413	14087767	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000407:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087768	14089700	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000407:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14089701	14089747	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000407:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14089748	14111571	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000407:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14111572	14111665	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000407:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14111666	14112522	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000407:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14112523	14117292	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03209_ch_T0000407;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000407:3;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14087413	14117292	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_G0000161;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03209_ch_T0000408;Name=TTTY15
HG03209_chrY	CAT	exon	14087413	14087767	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087768	14111571	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14111572	14111665	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14111666	14112522	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14112523	14117292	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03209_ch_T0000408;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000408:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14087413	14117292	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_G0000161;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03209_ch_T0000409;Name=TTTY15
HG03209_chrY	CAT	exon	14087413	14087767	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087768	14111571	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14111572	14111665	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14111666	14112743	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14112744	14117292	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03209_ch_T0000409;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000409:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14087413	14117292	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_G0000161;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03209_ch_T0000410;Name=TTTY15
HG03209_chrY	CAT	exon	14087413	14087767	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087768	14089700	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14089701	14089747	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14089748	14111571	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14111572	14111665	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000410:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14111666	14112743	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000410:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14112744	14117292	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03209_ch_T0000410;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000410:3;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14087413	14117292	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_G0000161;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03209_ch_T0000411;Name=TTTY15
HG03209_chrY	CAT	exon	14087413	14087767	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14087768	14089700	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14089701	14089747	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14089748	14111571	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14111572	14111665	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14111666	14115384	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03209_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14115385	14117292	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03209_ch_T0000411;gene_id=HG03209_ch_G0000161;Parent=HG03209_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03209_ch_T0000411:3;Name=TTTY15;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14126290	14285897	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG03209_ch_G0000162;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000162;Name=USP9Y
HG03209_chrY	CAT	transcript	14126290	14285897	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_G0000162;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03209_ch_T0000412;Name=USP9Y
HG03209_chrY	CAT	exon	14126290	14127114	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14127115	14133696	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14133697	14133756	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14133757	14134450	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14134451	14134606	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14134511	14134606	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	14134511	14134513	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03209_ch_T0000412;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14134607	14145651	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14145652	14145800	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14145652	14145800	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14145801	14147169	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14147170	14147249	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14147170	14147249	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14147250	14150174	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14150175	14150287	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14150175	14150287	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14150288	14151636	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14151637	14151855	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14151637	14151855	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14151856	14160673	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14160674	14160789	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14160674	14160789	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14160790	14161059	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161060	14161311	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161060	14161311	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161312	14161472	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161473	14161611	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161473	14161611	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161612	14163218	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14163219	14163371	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14163219	14163371	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14163372	14164586	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14164587	14164691	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14164587	14164691	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14164692	14182253	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14182254	14182460	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14182254	14182460	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14182461	14183567	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14183568	14183704	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14183568	14183704	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14183705	14185545	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14185546	14185679	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14185546	14185679	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14185680	14196129	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14196130	14196217	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14196130	14196217	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14196218	14198644	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14198645	14198987	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14198645	14198987	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14198988	14200532	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14200533	14200628	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14200533	14200628	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14200629	14201710	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14201711	14201922	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14201711	14201922	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14201923	14203080	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203081	14203321	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203081	14203321	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203322	14203667	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203668	14203817	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203668	14203817	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203818	14204587	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14204588	14204708	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14204588	14204708	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14204709	14211264	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211265	14211395	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211265	14211395	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211396	14211582	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211583	14211861	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211583	14211861	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211862	14215467	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14215468	14215593	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14215468	14215593	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14215594	14216559	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14216560	14216685	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14216560	14216685	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14216686	14218092	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14218093	14218262	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14218093	14218262	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14218263	14235240	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235241	14235349	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235241	14235349	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235350	14235733	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235734	14235880	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235734	14235880	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235881	14236696	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14236697	14236843	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14236697	14236843	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14236844	14237891	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14237892	14238114	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14237892	14238114	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14238115	14241185	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14241186	14241406	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14241186	14241406	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14241407	14243481	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14243482	14243672	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14243482	14243672	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14243673	14258745	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14258746	14258919	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14258746	14258919	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14258920	14262968	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14262969	14263110	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14262969	14263110	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14263111	14264921	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14264922	14265672	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14264922	14265672	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14265673	14266067	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14266068	14266191	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14266068	14266191	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14266192	14267297	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14267298	14267523	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14267298	14267523	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14267524	14268121	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14268122	14268251	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14268122	14268251	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14268252	14271390	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271391	14271576	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271391	14271576	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14271577	14271990	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271991	14272211	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271991	14272211	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272212	14272296	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14272297	14272385	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14272297	14272385	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272386	14281397	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281398	14281554	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281398	14281554	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281555	14281690	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281691	14281903	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281691	14281903	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281904	14282623	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14282624	14282719	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:44;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14282624	14282719	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14282720	14284336	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000412:44;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14284337	14285897	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000412:45;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14284337	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	14284472	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000412;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03209_ch_T0000412;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14132916	14285897	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_G0000162;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03209_ch_T0000413;Name=USP9Y
HG03209_chrY	CAT	exon	14132916	14132944	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14132945	14133696	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14133697	14133756	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14133757	14134450	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14134451	14134606	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14134511	14134606	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	14134511	14134513	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03209_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14134607	14145651	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14145652	14145800	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14145652	14145800	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14145801	14147169	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14147170	14147249	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14147170	14147249	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14147250	14150174	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14150175	14150287	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14150175	14150287	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14150288	14151636	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14151637	14151855	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14151637	14151855	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14151856	14160673	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14160674	14160789	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14160674	14160789	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14160790	14161059	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161060	14161311	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161060	14161311	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161312	14161472	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161473	14161611	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161473	14161611	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161612	14163218	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14163219	14163371	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14163219	14163371	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14163372	14164586	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14164587	14164691	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14164587	14164691	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14164692	14182253	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14182254	14182460	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14182254	14182460	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14182461	14183567	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14183568	14183704	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14183568	14183704	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14183705	14185545	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14185546	14185679	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14185546	14185679	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14185680	14196129	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14196130	14196217	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14196130	14196217	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14196218	14198644	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14198645	14198987	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14198645	14198987	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14198988	14200532	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14200533	14200628	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14200533	14200628	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14200629	14201710	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14201711	14201922	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14201711	14201922	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14201923	14203080	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203081	14203321	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203081	14203321	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203322	14203667	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203668	14203817	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203668	14203817	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203818	14204587	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14204588	14204708	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14204588	14204708	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14204709	14211264	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211265	14211395	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211265	14211395	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211396	14211582	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211583	14211861	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211583	14211861	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211862	14215467	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14215468	14215593	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14215468	14215593	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14215594	14216559	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14216560	14216685	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14216560	14216685	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14216686	14218092	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14218093	14218262	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14218093	14218262	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14218263	14235240	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235241	14235349	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235241	14235349	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235350	14235733	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235734	14235880	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235734	14235880	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235881	14236696	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14236697	14236843	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14236697	14236843	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14236844	14237891	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14237892	14238114	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14237892	14238114	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14238115	14241185	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14241186	14241406	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14241186	14241406	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14241407	14243481	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14243482	14243672	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14243482	14243672	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14243673	14258745	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14258746	14258919	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14258746	14258919	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14258920	14262968	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14262969	14263110	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14262969	14263110	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14263111	14264921	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14264922	14265672	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14264922	14265672	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14265673	14266067	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14266068	14266191	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14266068	14266191	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14266192	14267297	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14267298	14267523	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14267298	14267523	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14267524	14268121	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14268122	14268251	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14268122	14268251	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14268252	14271390	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271391	14271576	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271391	14271576	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14271577	14271990	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271991	14272211	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271991	14272211	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272212	14272296	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14272297	14272385	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14272297	14272385	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272386	14281397	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281398	14281554	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281398	14281554	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281555	14281690	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281691	14281903	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281691	14281903	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281904	14282623	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14282624	14282719	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:44;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14282624	14282719	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14282720	14284336	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000413:44;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14284337	14285897	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000413:45;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14284337	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	14284472	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000413;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03209_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14134519	14285897	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_G0000162;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03209_ch_T0000414;Name=USP9Y
HG03209_chrY	CAT	exon	14134519	14134606	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14134607	14139701	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14139702	14139852	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14139853	14145651	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14145652	14145800	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14145790	14145800	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	14145790	14145792	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03209_ch_T0000414;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14145801	14147169	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14147170	14147249	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14147170	14147249	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14147250	14150174	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14150175	14150287	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14150175	14150287	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14150288	14151636	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14151637	14151855	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14151637	14151855	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14151856	14160673	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14160674	14160789	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14160674	14160789	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14160790	14161059	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161060	14161311	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161060	14161311	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161312	14161472	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14161473	14161611	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14161473	14161611	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14161612	14163218	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14163219	14163371	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14163219	14163371	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14163372	14164586	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14164587	14164691	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14164587	14164691	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14164692	14182253	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14182254	14182460	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14182254	14182460	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14182461	14183567	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14183568	14183704	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14183568	14183704	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14183705	14185545	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14185546	14185679	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14185546	14185679	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14185680	14196129	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14196130	14196217	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14196130	14196217	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14196218	14198644	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14198645	14198987	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14198645	14198987	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14198988	14200532	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14200533	14200628	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14200533	14200628	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14200629	14201710	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14201711	14201922	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14201711	14201922	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14201923	14203080	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203081	14203321	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203081	14203321	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203322	14203667	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14203668	14203817	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14203668	14203817	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14203818	14204587	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14204588	14204708	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14204588	14204708	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14204709	14211264	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211265	14211395	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211265	14211395	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211396	14211582	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14211583	14211861	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14211583	14211861	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14211862	14215467	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14215468	14215593	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14215468	14215593	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14215594	14216559	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14216560	14216685	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14216560	14216685	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14216686	14218092	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14218093	14218262	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14218093	14218262	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14218263	14235240	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235241	14235349	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235241	14235349	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235350	14235733	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14235734	14235880	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14235734	14235880	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14235881	14236696	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14236697	14236843	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14236697	14236843	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14236844	14237891	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14237892	14238114	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14237892	14238114	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14238115	14241185	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14241186	14241406	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14241186	14241406	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14241407	14243481	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14243482	14243672	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14243482	14243672	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14243673	14258745	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14258746	14258919	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14258746	14258919	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14258920	14262968	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14262969	14263110	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14262969	14263110	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14263111	14264921	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14264922	14265672	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14264922	14265672	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14265673	14266067	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14266068	14266191	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14266068	14266191	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14266192	14267297	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14267298	14267523	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14267298	14267523	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14267524	14268121	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14268122	14268251	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14268122	14268251	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14268252	14271390	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271391	14271576	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271391	14271576	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14271577	14271990	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14271991	14272211	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14271991	14272211	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272212	14272296	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14272297	14272385	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14272297	14272385	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14272386	14281397	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281398	14281554	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281398	14281554	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281555	14281690	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14281691	14281903	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14281691	14281903	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14281904	14282623	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14282624	14282719	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14282624	14282719	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14282720	14284336	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03209_ch_T0000414:43;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14284337	14285897	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03209_ch_T0000414:44;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14284337	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03209_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	14284472	14284474	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000414;gene_id=HG03209_ch_G0000162;Parent=HG03209_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03209_ch_T0000414;Name=USP9Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14329924	14345535	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;gene_id=HG03209_ch_G0000163;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG03209_ch_G0000163;Name=DDX3Y
HG03209_chrY	CAT	transcript	14329924	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000415;Name=DDX3Y
HG03209_chrY	CAT	exon	14329924	14330037	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330038	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000415:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000415;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000415:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14329924	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000416;Name=DDX3Y
HG03209_chrY	CAT	exon	14329924	14330037	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330038	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14339706	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14339707	14339940	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339941	14340039	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340040	14340123	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340124	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000416:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000416;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000416:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14329924	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000417;Name=DDX3Y
HG03209_chrY	CAT	exon	14329924	14330037	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330038	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000417;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000417:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14329924	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000418;Name=DDX3Y
HG03209_chrY	CAT	exon	14329924	14330037	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330038	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14342032	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342033	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000418:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000418;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000418:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14329924	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000419;Name=DDX3Y
HG03209_chrY	CAT	exon	14329924	14330037	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330038	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14339706	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14339707	14339940	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339941	14340039	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340040	14340140	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340141	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000419:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000419;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000419:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14330761	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000420;Name=DDX3Y
HG03209_chrY	CAT	exon	14330761	14330871	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330872	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14339706	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14339707	14339940	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339941	14340039	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340040	14340123	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340124	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000420;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000420:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14330761	14345535	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03209_ch_T0000421;Name=DDX3Y
HG03209_chrY	CAT	exon	14330761	14330871	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14330872	14332593	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14332594	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14336895	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14336896	14337025	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14337026	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13,hg002_chrY_paternal_315.14;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000421;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000421:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14332626	14345535	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_G0000163;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG03209_ch_T0000422;Name=DDX3Y
HG03209_chrY	CAT	exon	14332626	14332651	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14332652	14334416	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14334417	14334464	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14334465	14337783	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14337784	14338119	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338120	14338774	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14338775	14338910	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14338790	14338910	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	14338790	14338792	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG03209_ch_T0000422;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14338911	14339620	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339621	14339706	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14339621	14339706	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14339707	14339940	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14339941	14340039	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14339941	14340039	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340040	14340123	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340124	14340284	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14340124	14340284	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340285	14340686	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340687	14340831	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14340687	14340831	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14340832	14340939	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14340940	14341084	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14340940	14341084	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341085	14341317	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341318	14341499	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14341318	14341499	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341500	14341573	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341574	14341691	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14341574	14341691	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14341692	14341963	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14341964	14342117	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14341964	14342117	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342118	14342459	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14342460	14342599	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14342460	14342599	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14342600	14343099	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03209_ch_T0000422:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14343100	14345535	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03209_ch_T0000422:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	14343100	14343179	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03209_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	14343177	14343179	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000422;gene_id=HG03209_ch_G0000163;Parent=HG03209_ch_T0000422;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG03209_ch_T0000422;Name=DDX3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14536380	14550695	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=HG03209_ch_G0000164;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=HG03209_ch_G0000164;Name=LOC112268312
HG03209_chrY	CAT	transcript	14536380	14543962	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_G0000164;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000423;Name=LOC112268312
HG03209_chrY	CAT	exon	14536380	14536468	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000423:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536469	14536654	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000423:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14536655	14536817	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000423:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536818	14542763	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000423:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14542764	14543962	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03209_ch_T0000423;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000423:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14536380	14550695	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_G0000164;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000424;Name=LOC112268312
HG03209_chrY	CAT	exon	14536380	14536468	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536469	14536654	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14536655	14536817	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536818	14542763	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14542764	14542900	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000424:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14542901	14550328	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000424:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14550329	14550695	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03209_ch_T0000424;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000424:3;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14536502	14543962	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_G0000164;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03209_ch_T0000425;Name=LOC112268312
HG03209_chrY	CAT	exon	14536502	14536520	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000425:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536521	14536654	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000425:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14536655	14536817	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000425:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14536818	14542763	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03209_ch_T0000425:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14542764	14543962	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03209_ch_T0000425;gene_id=HG03209_ch_G0000164;Parent=HG03209_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03209_ch_T0000425:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14658951	14905720	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG03209_ch_G0000165;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG03209_ch_G0000165;Name=UTY
HG03209_chrY	CAT	transcript	14658951	14905083	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000426;Name=UTY
HG03209_chrY	CAT	exon	14658951	14659882	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14659883	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905083	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000426;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000426:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000427;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000427;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000428;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000428;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000428:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000429;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14730711	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730712	14730779	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730780	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794322	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794323	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000429:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000429;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000429:29;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000430;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14759278	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14759279	14759401	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14759402	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000430;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000431;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780589	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780590	14780698	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780699	14780764	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780765	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000431:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000431;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000431:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000432;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14760861	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14760862	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000432;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000432:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000433;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000433;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000434;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14900952	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14900953	14901075	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14901076	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000434;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000434:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000435;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14760861	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14760862	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000435;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000436;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14703298	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14703299	14703403	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14703404	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785541	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785542	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000436;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000436:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000437;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783371	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783372	14783507	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783508	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000437;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000437:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000438;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783371	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783372	14783582	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783583	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000438:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000438;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000438:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000439;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14730711	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730712	14730779	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730780	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785541	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785542	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000439;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000439:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000440;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780589	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780590	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000440;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000441;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14730711	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730712	14730779	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730780	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000441;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000442;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000442;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000443;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000443:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000443;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000443:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000444;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000444;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000445;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725059	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725060	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783614	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783615	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14825002	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14825003	14825116	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14825117	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000445:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000445;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000445:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000446;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725059	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725060	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783582	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783583	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000446;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000446:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000447;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730544	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730545	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14825002	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14825003	14825116	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14825117	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000447;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000448;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14729240	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14729241	14729269	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14729270	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751403	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751404	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000448:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000448;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000448:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000449;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725035	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725036	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780153	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780154	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:29;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000449:29;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000449;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000449:30;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000450;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783582	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783583	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000450;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000451;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000451;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000452;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751403	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751404	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000452:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000452;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000452:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000453;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000453;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000454;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725059	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725060	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000454:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000454;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000454:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000455;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14825002	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14825003	14825116	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14825117	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000455:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000455;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000455:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000456;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000456;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000457;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000457;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000457:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000458;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14760861	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14760862	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000458;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000459;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14779846	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14779847	14779894	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14779895	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000459;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000459:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000460;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748162	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748163	14748429	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748430	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000460;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000460:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000461;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725035	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725036	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000461;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000461:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000462;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725059	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725060	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14864747	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14864748	14864827	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14864828	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000462:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000462;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000462:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000463;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780435	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780436	14780589	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780590	14780698	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780699	14780764	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780765	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783614	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783615	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000463:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000463;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000463:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000464;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751403	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751404	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000464;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000465;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794322	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794323	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000465;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000466;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14779846	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14779847	14779894	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14779895	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783614	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783615	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000466;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000466:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000467;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676053	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676054	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783582	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783583	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000467;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000467:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000468;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794322	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794323	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000468;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000468:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000469;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000469;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000470;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751403	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751404	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000470;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000470:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000471;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14730711	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730712	14730779	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730780	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000471;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000471:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000472;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14703298	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14703299	14703403	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14703404	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000472;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000472:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000473;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14760861	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14760862	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000473;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000473:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000474;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783582	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783583	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000474:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000474;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000474:28;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000475;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14828847	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14828848	14828953	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14828954	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000475;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000475:27;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000476;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000476;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14673431	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000477;Name=UTY
HG03209_chrY	CAT	exon	14673431	14674934	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14674935	14676068	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14676069	14676239	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14676240	14685329	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14685330	14685456	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14685457	14722765	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14722766	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785004	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785005	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000477:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000477;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000477:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14722568	14905083	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000478;Name=UTY
HG03209_chrY	CAT	exon	14722568	14722907	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14722908	14724014	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14724015	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725035	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725036	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905083	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000478;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14724148	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000479;Name=UTY
HG03209_chrY	CAT	exon	14724148	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725035	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725036	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14779846	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14779847	14779894	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14779895	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000479:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000479;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000479:26;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14724184	14905720	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_G0000165;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03209_ch_T0000480;Name=UTY
HG03209_chrY	CAT	exon	14724184	14724202	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14724203	14725035	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14725036	14725127	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14725128	14727935	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14727936	14728050	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14728051	14730457	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14730458	14730606	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14730607	14731096	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14731097	14731309	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14731310	14748615	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14748616	14748821	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14748822	14749661	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14749662	14749767	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14749768	14751281	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14751282	14751411	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14751412	14760623	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14760624	14761396	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14761397	14780063	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780064	14780459	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14780460	14780983	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14780984	14781079	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14781080	14782937	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14782938	14783030	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783031	14783524	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14783525	14783680	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14783681	14784148	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784149	14784283	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14784284	14784827	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14784828	14785047	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785048	14785490	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14785491	14785589	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14785590	14791327	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14791328	14791454	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14791455	14794317	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14794318	14794411	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14794412	14818921	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14818922	14818956	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14818957	14821982	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14821983	14822037	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14822038	14836053	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14836054	14836174	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14836175	14839795	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14839796	14839854	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14839855	14874065	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14874066	14874115	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14874116	14895170	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14895171	14895279	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14895280	14904303	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904304	14904367	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	14904368	14904563	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03209_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	14904564	14905720	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03209_ch_T0000480;gene_id=HG03209_ch_G0000165;Parent=HG03209_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03209_ch_T0000480:25;Name=UTY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	14904227	14904264	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG03209_ch_G0000166;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG03209_ch_G0000166;Name=MIR12120
HG03209_chrY	CAT	transcript	14904227	14904316	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03209_ch_T0000481;gene_id=HG03209_ch_G0000166;Parent=HG03209_ch_G0000166;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03209_ch_T0000481;Name=MIR12120
HG03209_chrY	CAT	exon	14904227	14904316	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03209_ch_T0000481;gene_id=HG03209_ch_G0000166;Parent=HG03209_ch_T0000481;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03209_ch_T0000481:0;Name=MIR12120;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	14904239	14904264	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03209_ch_T0000482;gene_id=HG03209_ch_G0000166;Parent=HG03209_ch_G0000166;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03209_ch_T0000482;Name=MIR12120
HG03209_chrY	CAT	exon	14904239	14904264	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03209_ch_T0000482;gene_id=HG03209_ch_G0000166;Parent=HG03209_ch_T0000482;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03209_ch_T0000482:0;Name=MIR12120;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	15128859	15130984	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG03209_ch_G0000167;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG03209_ch_G0000167;Name=TMSB4Y
HG03209_chrY	CAT	transcript	15128859	15130984	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_G0000167;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG03209_ch_T0000483;Name=TMSB4Y
HG03209_chrY	CAT	exon	15128859	15129395	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03209_ch_T0000483:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15129296	15129395	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03209_ch_T0000483:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	15129296	15129298	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG03209_ch_T0000483;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15129396	15130184	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG03209_ch_T0000483:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	15130185	15130984	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03209_ch_T0000483:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15130185	15130219	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03209_ch_T0000483:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	15130217	15130219	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03209_ch_T0000483;gene_id=HG03209_ch_G0000167;Parent=HG03209_ch_T0000483;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG03209_ch_T0000483;Name=TMSB4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	15410833	15411534	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=HG03209_ch_G0000168;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000168;Name=VCY
HG03209_chrY	CAT	transcript	15410833	15411534	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_G0000168;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG03209_ch_T0000484;Name=VCY
HG03209_chrY	CAT	exon	15410833	15411207	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03209_ch_T0000484:0;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15410932	15411207	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03209_ch_T0000484:0;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	15410932	15410934	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG03209_ch_T0000484;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15411208	15411399	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG03209_ch_T0000484:0;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	15411400	15411534	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03209_ch_T0000484:1;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15411400	15411501	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03209_ch_T0000484:1;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	15411499	15411501	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000484;gene_id=HG03209_ch_G0000168;Parent=HG03209_ch_T0000484;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG03209_ch_T0000484;Name=VCY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	15481304	15482035	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=HG03209_ch_G0000169;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000169;Name=VCY1B
HG03209_chrY	CAT	transcript	15481304	15482035	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_G0000169;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG03209_ch_T0000485;Name=VCY1B
HG03209_chrY	CAT	exon	15481304	15481468	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03209_ch_T0000485:0;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15481367	15481468	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03209_ch_T0000485:0;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	15481367	15481369	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG03209_ch_T0000485;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15481469	15481660	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG03209_ch_T0000485:0;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	15481661	15482035	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03209_ch_T0000485:1;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	15481661	15481936	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03209_ch_T0000485:1;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	15481934	15481936	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000485;gene_id=HG03209_ch_G0000169;Parent=HG03209_ch_T0000485;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG03209_ch_T0000485;Name=VCY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	15947673	16270695	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG03209_ch_G0000170;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000170;Name=NLGN4Y
HG03209_chrY	CAT	transcript	15947673	16158640	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000486;Name=NLGN4Y
HG03209_chrY	CAT	exon	15947673	15947998	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15947999	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000486;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16158542	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16158543	16158640	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000486:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16158543	16158628	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16158626	16158628	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000486;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000486;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15947673	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000487;Name=NLGN4Y
HG03209_chrY	CAT	exon	15947673	15947998	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15947999	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148238	16148358	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16148238	16148240	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000487:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000487;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15947673	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000488;Name=NLGN4Y
HG03209_chrY	CAT	exon	15947673	15947998	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15947999	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000488:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000488:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000488:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000488;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15947673	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000489;Name=NLGN4Y
HG03209_chrY	CAT	exon	15947673	15947998	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15947999	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000489;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15947673	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000490;Name=NLGN4Y
HG03209_chrY	CAT	exon	15947673	15948629	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15948630	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000490:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000490:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000490:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000490;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15948803	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000491;Name=NLGN4Y
HG03209_chrY	CAT	exon	15948803	15948955	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15948956	16047093	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047094	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000491;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949029	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000492;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949029	15949341	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949342	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000492:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000492;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949029	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000493;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949029	15949341	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949342	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000493:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000493;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16158640	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000494;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16158542	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16158543	16158640	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16158543	16158628	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16158626	16158628	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000494;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000495;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000495:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000495;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000496;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949765	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949766	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000496:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000496;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000497;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	16009245	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16009246	16009347	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16009348	16012681	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16012682	16012786	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16012787	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000497:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000497:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000497;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000498;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949765	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949766	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000498:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000498;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000499;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949614	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949615	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000499;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000500;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000500;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000501;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	15985651	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	15985652	15985731	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15985732	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000501:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000501:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000501;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000502;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949614	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949615	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000502:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000502;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000503;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949993	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949994	15985651	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	15985652	15985731	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15985732	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000503:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000503;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15949586	16158640	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000504;Name=NLGN4Y
HG03209_chrY	CAT	exon	15949586	15949765	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15949766	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16158542	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16158543	16158640	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16158543	16158628	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16158626	16158628	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000504;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	15978793	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000505;Name=NLGN4Y
HG03209_chrY	CAT	exon	15978793	15985731	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	15985732	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000505:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000505;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16007661	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000506;Name=NLGN4Y
HG03209_chrY	CAT	exon	16007661	16009363	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16009364	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000506:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000506;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16007661	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000507;Name=NLGN4Y
HG03209_chrY	CAT	exon	16007661	16009363	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16009364	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000507;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16012682	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000508;Name=NLGN4Y
HG03209_chrY	CAT	exon	16012682	16012786	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16012787	16047081	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000508:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000508;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16047082	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000509;Name=NLGN4Y
HG03209_chrY	CAT	exon	16047082	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16126126	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16126127	16126220	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16126184	16126220	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16126184	16126186	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16126221	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000509:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000509;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16047094	16158640	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000510;Name=NLGN4Y
HG03209_chrY	CAT	exon	16047094	16047664	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16047193	16047664	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16047193	16047195	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16047665	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16144546	16144605	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148206	16148358	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16158542	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16158543	16158640	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16158543	16158628	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16158626	16158628	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000510;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	16129875	16270695	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_G0000170;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03209_ch_T0000511;Name=NLGN4Y
HG03209_chrY	CAT	exon	16129875	16129895	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16129896	16144545	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16144546	16144605	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16144606	16148205	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16148206	16148358	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16148238	16148358	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	16148238	16148240	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03209_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16148359	16249228	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16249229	16249414	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16249229	16249414	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16249415	16254770	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16254771	16255560	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16254771	16255560	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16255561	16265453	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03209_ch_T0000511:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16265454	16270695	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03209_ch_T0000511:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	16265454	16266303	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03209_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	16266301	16266303	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000511;gene_id=HG03209_ch_G0000170;Parent=HG03209_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03209_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	16218728	16229075	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG03209_ch_G0000171;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG03209_ch_G0000171;Name=NLGN4Y-AS1
HG03209_chrY	CAT	transcript	16218728	16229075	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_G0000171;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG03209_ch_T0000512;Name=NLGN4Y-AS1
HG03209_chrY	CAT	exon	16218728	16219073	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03209_ch_T0000512:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16219074	16223707	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03209_ch_T0000512:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16223708	16223795	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03209_ch_T0000512:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16223796	16226361	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03209_ch_T0000512:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16226362	16226430	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03209_ch_T0000512:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16226431	16229046	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03209_ch_T0000512:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16229047	16229075	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03209_ch_T0000512;gene_id=HG03209_ch_G0000171;Parent=HG03209_ch_T0000512;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03209_ch_T0000512:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	16672093	16790088	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG03209_ch_G0000172;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG03209_ch_G0000172;Name=LOC107987355
HG03209_chrY	CAT	transcript	16672093	16790088	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_G0000172;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG03209_ch_T0000513;Name=LOC107987355
HG03209_chrY	CAT	exon	16672093	16672165	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_T0000513;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03209_ch_T0000513:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16672166	16773614	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_T0000513;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03209_ch_T0000513:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16773615	16773837	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_T0000513;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03209_ch_T0000513:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	16773838	16790002	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_T0000513;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03209_ch_T0000513:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	16790003	16790088	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03209_ch_T0000513;gene_id=HG03209_ch_G0000172;Parent=HG03209_ch_T0000513;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03209_ch_T0000513:2;Name=LOC107987355;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	17563376	17563507	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG03209_ch_G0000173;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG03209_ch_G0000173;Name=LOC124900508
HG03209_chrY	CAT	transcript	17563376	17563507	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03209_ch_T0000514;gene_id=HG03209_ch_G0000173;Parent=HG03209_ch_G0000173;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG03209_ch_T0000514;Name=LOC124900508
HG03209_chrY	CAT	exon	17563376	17563507	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03209_ch_T0000514;gene_id=HG03209_ch_G0000173;Parent=HG03209_ch_T0000514;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG03209_ch_T0000514:0;Name=LOC124900508;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	18926177	18941953	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;gene_id=HG03209_ch_G0000174;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG03209_ch_G0000174;Name=FAM41AY2
HG03209_chrY	CAT	transcript	18926177	18941953	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_G0000174;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG03209_ch_T0000515;Name=FAM41AY2
HG03209_chrY	CAT	exon	18926177	18926334	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18926335	18926929	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18926930	18926979	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18926980	18938308	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18938309	18938437	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18938438	18938684	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18938685	18938778	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18938779	18939371	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18939372	18939542	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18939543	18939651	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18939652	18939745	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18939746	18940019	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18940020	18940229	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18940230	18940522	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18940523	18940710	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18940711	18940922	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18940923	18941144	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18941145	18941226	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03209_ch_T0000515:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18941227	18941953	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03209_ch_T0000515;gene_id=HG03209_ch_G0000174;Parent=HG03209_ch_T0000515;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03209_ch_T0000515:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	18979355	18988613	.	-	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;gene_id=HG03209_ch_G0000175;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG03209_ch_G0000175;Name=LOC105377217
HG03209_chrY	CAT	transcript	18979355	18988613	1000	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_G0000175;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG03209_ch_T0000516;Name=LOC105377217
HG03209_chrY	CAT	exon	18979355	18981221	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_T0000516;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03209_ch_T0000516:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18981222	18981931	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_T0000516;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03209_ch_T0000516:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18981932	18982060	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_T0000516;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03209_ch_T0000516:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	18982061	18983271	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_T0000516;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03209_ch_T0000516:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	18983272	18988613	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1,hg002_chrY_paternal_346.1;transcript_id=HG03209_ch_T0000516;gene_id=HG03209_ch_G0000175;Parent=HG03209_ch_T0000516;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03209_ch_T0000516:2;Name=LOC105377217;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19000387	19004686	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;gene_id=HG03209_ch_G0000176;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG03209_ch_G0000176;Name=FAM224A
HG03209_chrY	CAT	transcript	19000387	19004686	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_G0000176;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG03209_ch_T0000517;Name=FAM224A
HG03209_chrY	CAT	exon	19000387	19000570	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_T0000517;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03209_ch_T0000517:0;Name=FAM224A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19000571	19001905	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_T0000517;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03209_ch_T0000517:0;Name=FAM224A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19001906	19002023	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_T0000517;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03209_ch_T0000517:1;Name=FAM224A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19002024	19004528	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_T0000517;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03209_ch_T0000517:1;Name=FAM224A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19004529	19004686	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1,hg002_chrY_paternal_349.1;transcript_id=HG03209_ch_T0000517;gene_id=HG03209_ch_G0000176;Parent=HG03209_ch_T0000517;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03209_ch_T0000517:2;Name=FAM224A;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19113713	19114513	.	-	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=HG03209_ch_G0000177;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG03209_ch_G0000177;Name=LOC105377218
HG03209_chrY	CAT	transcript	19113713	19114513	1000	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_G0000177;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG03209_ch_T0000518;Name=LOC105377218
HG03209_chrY	CAT	exon	19113713	19114169	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_T0000518;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03209_ch_T0000518:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19114170	19114257	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_T0000518;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03209_ch_T0000518:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19114258	19114343	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_T0000518;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03209_ch_T0000518:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19114344	19114430	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_T0000518;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03209_ch_T0000518:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19114431	19114513	.	-	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03209_ch_T0000518;gene_id=HG03209_ch_G0000177;Parent=HG03209_ch_T0000518;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03209_ch_T0000518:2;Name=LOC105377218;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19118131	19124991	.	-	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;gene_id=HG03209_ch_G0000178;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=HG03209_ch_G0000178;Name=LOC124905302
HG03209_chrY	CAT	transcript	19118131	19124991	1000	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_G0000178;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG03209_ch_T0000519;Name=LOC124905302
HG03209_chrY	CAT	exon	19118131	19122075	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_T0000519;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03209_ch_T0000519:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19122076	19122163	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_T0000519;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03209_ch_T0000519:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19122164	19122912	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_T0000519;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03209_ch_T0000519:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19122913	19122999	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_T0000519;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03209_ch_T0000519:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19123000	19124991	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_353.1,hg002_chrY_paternal_353.1;transcript_id=HG03209_ch_T0000519;gene_id=HG03209_ch_G0000178;Parent=HG03209_ch_T0000519;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03209_ch_T0000519:2;Name=LOC124905302;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19194182	19195762	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;gene_id=HG03209_ch_G0000179;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG03209_ch_G0000179;Name=XKRY2
HG03209_chrY	CAT	transcript	19194182	19195762	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG03209_ch_T0000520;gene_id=HG03209_ch_G0000179;Parent=HG03209_ch_G0000179;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG03209_ch_T0000520;Name=XKRY2
HG03209_chrY	CAT	exon	19194182	19195762	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG03209_ch_T0000520;gene_id=HG03209_ch_G0000179;Parent=HG03209_ch_T0000520;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG03209_ch_T0000520:0;Name=XKRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19303451	19305410	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;gene_id=HG03209_ch_G0000180;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000180;Name=CDY2A
HG03209_chrY	CAT	transcript	19303451	19305410	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000521;gene_id=HG03209_ch_G0000180;Parent=HG03209_ch_G0000180;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG03209_ch_T0000521;Name=CDY2A
HG03209_chrY	CAT	exon	19303451	19305410	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000521;gene_id=HG03209_ch_G0000180;Parent=HG03209_ch_T0000521;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG03209_ch_T0000521:0;Name=CDY2A;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19303457	19305082	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000521;gene_id=HG03209_ch_G0000180;Parent=HG03209_ch_T0000521;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG03209_ch_T0000521:0;Name=CDY2A;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	19303457	19303459	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000521;gene_id=HG03209_ch_G0000180;Parent=HG03209_ch_T0000521;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG03209_ch_T0000521;Name=CDY2A;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19305080	19305082	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000521;gene_id=HG03209_ch_G0000180;Parent=HG03209_ch_T0000521;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG03209_ch_T0000521;Name=CDY2A;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19451005	19452965	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;gene_id=HG03209_ch_G0000181;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000181;Name=CDY2B
HG03209_chrY	CAT	transcript	19451005	19452965	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000522;gene_id=HG03209_ch_G0000181;Parent=HG03209_ch_G0000181;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG03209_ch_T0000522;Name=CDY2B
HG03209_chrY	CAT	exon	19451005	19452965	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000522;gene_id=HG03209_ch_G0000181;Parent=HG03209_ch_T0000522;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG03209_ch_T0000522:0;Name=CDY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19451333	19452958	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000522;gene_id=HG03209_ch_G0000181;Parent=HG03209_ch_T0000522;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG03209_ch_T0000522:0;Name=CDY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19451333	19451335	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000522;gene_id=HG03209_ch_G0000181;Parent=HG03209_ch_T0000522;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG03209_ch_T0000522;Name=CDY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	19452956	19452958	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000522;gene_id=HG03209_ch_G0000181;Parent=HG03209_ch_T0000522;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG03209_ch_T0000522;Name=CDY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19560666	19562246	.	+	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;gene_id=HG03209_ch_G0000182;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG03209_ch_G0000182;Name=XKRY
HG03209_chrY	CAT	transcript	19560666	19562246	1000	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG03209_ch_T0000523;gene_id=HG03209_ch_G0000182;Parent=HG03209_ch_G0000182;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=HG03209_ch_T0000523;Name=XKRY
HG03209_chrY	CAT	exon	19560666	19562246	.	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG03209_ch_T0000523;gene_id=HG03209_ch_G0000182;Parent=HG03209_ch_T0000523;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:HG03209_ch_T0000523:0;Name=XKRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19631439	19638299	.	+	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_385.1;gene_id=HG03209_ch_G0000183;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=HG03209_ch_G0000183;Name=LOC124905303
HG03209_chrY	CAT	transcript	19631439	19638299	1000	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_G0000183;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG03209_ch_T0000524;Name=LOC124905303
HG03209_chrY	CAT	exon	19631439	19633430	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_T0000524;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03209_ch_T0000524:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19633431	19633517	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_T0000524;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03209_ch_T0000524:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19633518	19634266	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_T0000524;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03209_ch_T0000524:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19634267	19634354	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_T0000524;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03209_ch_T0000524:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19634355	19638299	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG03209_ch_T0000524;gene_id=HG03209_ch_G0000183;Parent=HG03209_ch_T0000524;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03209_ch_T0000524:2;Name=LOC124905303;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19641917	19642717	.	+	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=HG03209_ch_G0000184;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG03209_ch_G0000184;Name=LOC105377219
HG03209_chrY	CAT	transcript	19641917	19642717	1000	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_G0000184;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG03209_ch_T0000525;Name=LOC105377219
HG03209_chrY	CAT	exon	19641917	19641999	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_T0000525;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03209_ch_T0000525:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19642000	19642086	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_T0000525;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03209_ch_T0000525:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19642087	19642172	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_T0000525;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03209_ch_T0000525:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19642173	19642260	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_T0000525;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03209_ch_T0000525:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19642261	19642717	.	+	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03209_ch_T0000525;gene_id=HG03209_ch_G0000184;Parent=HG03209_ch_T0000525;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03209_ch_T0000525:2;Name=LOC105377219;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19751760	19756061	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;gene_id=HG03209_ch_G0000185;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG03209_ch_G0000185;Name=FAM224B
HG03209_chrY	CAT	transcript	19751760	19756061	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_G0000185;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG03209_ch_T0000526;Name=FAM224B
HG03209_chrY	CAT	exon	19751760	19751896	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_T0000526;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03209_ch_T0000526:0;Name=FAM224B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19751897	19754401	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_T0000526;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03209_ch_T0000526:0;Name=FAM224B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19754402	19754519	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_T0000526;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03209_ch_T0000526:1;Name=FAM224B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19754520	19755854	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_T0000526;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03209_ch_T0000526:1;Name=FAM224B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19755855	19756061	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1,hg002_chrY_paternal_389.1;transcript_id=HG03209_ch_T0000526;gene_id=HG03209_ch_G0000185;Parent=HG03209_ch_T0000526;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03209_ch_T0000526:2;Name=FAM224B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19772379	19777070	.	+	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;gene_id=HG03209_ch_G0000186;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG03209_ch_G0000186;Name=LOC105377220
HG03209_chrY	CAT	transcript	19772379	19777070	1000	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_G0000186;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG03209_ch_T0000527;Name=LOC105377220
HG03209_chrY	CAT	exon	19772379	19773153	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_T0000527;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03209_ch_T0000527:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19773154	19774364	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_T0000527;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03209_ch_T0000527:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19774365	19774493	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_T0000527;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03209_ch_T0000527:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19774494	19775203	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_T0000527;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03209_ch_T0000527:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19775204	19777070	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1,hg002_chrY_paternal_391.1;transcript_id=HG03209_ch_T0000527;gene_id=HG03209_ch_G0000186;Parent=HG03209_ch_T0000527;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03209_ch_T0000527:2;Name=LOC105377220;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19814473	19830249	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;gene_id=HG03209_ch_G0000187;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG03209_ch_G0000187;Name=FAM41AY1
HG03209_chrY	CAT	transcript	19814473	19830249	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_G0000187;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG03209_ch_T0000528;Name=FAM41AY1
HG03209_chrY	CAT	exon	19814473	19815199	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19815200	19815281	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19815282	19815503	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19815504	19815715	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19815716	19815903	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19815904	19816196	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19816197	19816406	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19816407	19816680	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19816681	19816774	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19816775	19816883	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19816884	19817054	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19817055	19817647	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19817648	19817741	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19817742	19817988	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19817989	19818117	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19818118	19829446	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19829447	19829496	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19829497	19830091	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03209_ch_T0000528:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19830092	19830249	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03209_ch_T0000528;gene_id=HG03209_ch_G0000187;Parent=HG03209_ch_T0000528;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03209_ch_T0000528:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19909239	19943071	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;gene_id=HG03209_ch_G0000188;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=HG03209_ch_G0000188;Name=LOC124905304
HG03209_chrY	CAT	transcript	19909239	19943071	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_G0000188;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=HG03209_ch_T0000529;Name=LOC124905304
HG03209_chrY	CAT	exon	19909239	19909279	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19909280	19911680	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19911681	19911843	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19911844	19912506	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19912507	19912608	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19912609	19914970	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19914971	19915174	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19915175	19916890	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19916891	19917025	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19917026	19925827	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19925828	19926060	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19926061	19926153	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19926154	19926259	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19926260	19931870	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19931871	19931998	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19931999	19940763	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03209_ch_T0000529:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19940764	19943071	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03209_ch_T0000529;gene_id=HG03209_ch_G0000188;Parent=HG03209_ch_T0000529;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03209_ch_T0000529:8;Name=LOC124905304;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	19954848	20014194	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=HG03209_ch_G0000189;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000189;Name=HSFY1
HG03209_chrY	CAT	transcript	19954848	19973797	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03209_ch_T0000530;Name=HSFY1
HG03209_chrY	CAT	exon	19954848	19955042	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19955017	19955042	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19955017	19955019	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03209_ch_T0000530;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19955043	19972237	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19972238	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972238	19972505	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	19972983	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19972984	19973797	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000530:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972984	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000530:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	19973674	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000530;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03209_ch_T0000530;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	19971886	19973797	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03209_ch_T0000531;Name=HSFY1
HG03209_chrY	CAT	exon	19971886	19972139	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972129	19972139	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19972129	19972131	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03209_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972140	19972237	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19972238	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972238	19972505	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	19972983	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19972984	19973797	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000531:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972984	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000531:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	19973674	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000531;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03209_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	19971896	20014194	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03209_ch_T0000532;Name=HSFY1
HG03209_chrY	CAT	exon	19971896	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19971993	19972505	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19971993	19971995	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03209_ch_T0000532;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	20013766	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20013767	20014194	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20013767	20013865	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20013863	20013865	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000532;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03209_ch_T0000532;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	19971896	19977281	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03209_ch_T0000533;Name=HSFY1
HG03209_chrY	CAT	exon	19971896	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	19975318	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19975319	19975428	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19975429	19975991	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19975992	19976078	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000533:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19976079	19977125	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000533:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19977126	19977281	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000533;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000533:3;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	19971896	20014194	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03209_ch_T0000534;Name=HSFY1
HG03209_chrY	CAT	exon	19971896	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	19975318	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19975319	19975428	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19975429	19975991	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19975992	19976078	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19976079	19977125	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000534:2;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19977126	19977280	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:3;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19977281	20007903	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000534:3;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20007904	20007989	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:4;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20007990	20013766	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03209_ch_T0000534:4;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20013767	20014194	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000534;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03209_ch_T0000534:5;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	19971925	19973797	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_G0000189;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03209_ch_T0000535;Name=HSFY1
HG03209_chrY	CAT	exon	19971925	19972505	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000535:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19971993	19972505	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000535:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	19971993	19971995	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03209_ch_T0000535;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	19972506	19972983	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03209_ch_T0000535:0;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	19972984	19973797	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03209_ch_T0000535:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	19972984	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03209_ch_T0000535:1;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	19973674	19973676	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000535;gene_id=HG03209_ch_G0000189;Parent=HG03209_ch_T0000535;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03209_ch_T0000535;Name=HSFY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20006437	20015752	.	-	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=HG03209_ch_G0000190;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG03209_ch_G0000190;Name=TTTY9B
HG03209_chrY	CAT	transcript	20006437	20015752	1000	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_G0000190;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG03209_ch_T0000536;Name=TTTY9B
HG03209_chrY	CAT	exon	20006437	20007579	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03209_ch_T0000536:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20007580	20012642	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03209_ch_T0000536:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20012643	20012779	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03209_ch_T0000536:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20012780	20013361	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03209_ch_T0000536:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20013362	20013475	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03209_ch_T0000536:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20013476	20013836	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03209_ch_T0000536:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20013837	20013937	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03209_ch_T0000536:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20013938	20015610	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03209_ch_T0000536:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20015611	20015752	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03209_ch_T0000536;gene_id=HG03209_ch_G0000190;Parent=HG03209_ch_T0000536;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03209_ch_T0000536:4;Name=TTTY9B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20155124	20164439	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=HG03209_ch_G0000191;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG03209_ch_G0000191;Name=TTTY9A
HG03209_chrY	CAT	transcript	20155124	20164439	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_G0000191;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG03209_ch_T0000537;Name=TTTY9A
HG03209_chrY	CAT	exon	20155124	20155265	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03209_ch_T0000537:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20155266	20156938	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03209_ch_T0000537:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20156939	20157039	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03209_ch_T0000537:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20157040	20157400	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03209_ch_T0000537:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20157401	20157514	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03209_ch_T0000537:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20157515	20158096	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03209_ch_T0000537:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20158097	20158233	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03209_ch_T0000537:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20158234	20163296	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03209_ch_T0000537:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20163297	20164439	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03209_ch_T0000537;gene_id=HG03209_ch_G0000191;Parent=HG03209_ch_T0000537;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03209_ch_T0000537:4;Name=TTTY9A;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20156682	20216015	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;gene_id=HG03209_ch_G0000192;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000192;Name=HSFY2
HG03209_chrY	CAT	transcript	20156682	20198987	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03209_ch_T0000538;Name=HSFY2
HG03209_chrY	CAT	exon	20156682	20157109	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000538:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20157011	20157109	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000538:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20157011	20157013	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03209_ch_T0000538;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20157110	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000538:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198987	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000538:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198358	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000538:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20198868	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000538;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000538;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03209_ch_T0000538;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20156682	20198987	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG03209_ch_T0000539;Name=HSFY2
HG03209_chrY	CAT	exon	20156682	20157109	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20157110	20162886	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03209_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20162887	20162972	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20162973	20193588	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03209_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20193589	20193743	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20193744	20194790	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03209_ch_T0000539:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20194791	20194877	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:3;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20194878	20195434	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03209_ch_T0000539:3;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20195435	20195544	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:4;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20195545	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03209_ch_T0000539:4;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198987	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000539;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000539;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03209_ch_T0000539:5;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20194766	20198987	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03209_ch_T0000540;Name=HSFY2
HG03209_chrY	CAT	exon	20194766	20194877	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20194856	20194877	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20194856	20194858	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03209_ch_T0000540;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20194878	20195434	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20195435	20195544	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20195435	20195544	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20195545	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198987	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198358	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20198868	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000540;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03209_ch_T0000540;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20197066	20198978	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03209_ch_T0000541;Name=HSFY2
HG03209_chrY	CAT	exon	20197066	20197879	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20197187	20197879	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20197187	20197189	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03209_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20197880	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198625	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198358	20198625	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20198626	20198723	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198724	20198978	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000541:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198724	20198734	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000541:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20198732	20198734	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000541;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03209_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20197066	20198987	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03209_ch_T0000542;Name=HSFY2
HG03209_chrY	CAT	exon	20197066	20197879	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20197187	20197879	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20197187	20197189	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03209_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20197880	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198987	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198358	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20198868	20198870	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000542;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03209_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20197066	20216015	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_G0000192;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03209_ch_T0000543;Name=HSFY2
HG03209_chrY	CAT	exon	20197066	20197879	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20197187	20197879	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20197187	20197189	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03209_ch_T0000543;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20197880	20198357	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20198358	20198625	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000543:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20198358	20198625	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000543:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20198626	20215820	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03209_ch_T0000543:1;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20215821	20216015	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03209_ch_T0000543:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20215821	20215846	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03209_ch_T0000543:2;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20215844	20215846	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000543;gene_id=HG03209_ch_G0000192;Parent=HG03209_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03209_ch_T0000543;Name=HSFY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20227792	20261650	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG03209_ch_G0000193;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=HG03209_ch_G0000193;Name=LOC124905305
HG03209_chrY	CAT	transcript	20227792	20261650	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_G0000193;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03209_ch_T0000544;Name=LOC124905305
HG03209_chrY	CAT	exon	20227792	20230099	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20230100	20244603	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20244604	20245035	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20245036	20253830	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20253831	20253965	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20253966	20255681	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20255682	20255885	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20255886	20258247	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20258248	20258349	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20258350	20259007	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20259008	20259170	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20259171	20261571	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000544:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20261572	20261650	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000544;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000544:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20227792	20261648	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_G0000193;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03209_ch_T0000545;Name=LOC124905305
HG03209_chrY	CAT	exon	20227792	20230099	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20230100	20238864	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20238865	20238992	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20238993	20244603	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20244604	20245035	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20245036	20253830	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20253831	20253965	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20253966	20255681	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20255682	20255885	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20255886	20258247	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20258248	20258349	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20258350	20259007	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20259008	20259170	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20259171	20261571	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03209_ch_T0000545:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20261572	20261648	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03209_ch_T0000545;gene_id=HG03209_ch_G0000193;Parent=HG03209_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03209_ch_T0000545:7;Name=LOC124905305;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20258981	20259142	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG03209_ch_G0000194;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG03209_ch_G0000194;Name=LOC124905307
HG03209_chrY	CAT	transcript	20258981	20259142	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03209_ch_T0000546;gene_id=HG03209_ch_G0000194;Parent=HG03209_ch_G0000194;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG03209_ch_T0000546;Name=LOC124905307
HG03209_chrY	CAT	exon	20258981	20259142	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03209_ch_T0000546;gene_id=HG03209_ch_G0000194;Parent=HG03209_ch_T0000546;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG03209_ch_T0000546:0;Name=LOC124905307;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20297754	20502822	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG03209_ch_G0000195;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG03209_ch_G0000195;Name=TTTY14
HG03209_chrY	CAT	transcript	20297754	20501278	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000547;Name=TTTY14
HG03209_chrY	CAT	exon	20297754	20298087	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000547:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20298088	20302320	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000547:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20302321	20302458	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000547:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20302459	20337632	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000547:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20337633	20337747	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000547:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20337748	20493998	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000547:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20493999	20494073	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000547:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20494074	20501215	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000547:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20501216	20501278	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03209_ch_T0000547;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000547:4;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20297754	20501304	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000548;Name=TTTY14
HG03209_chrY	CAT	exon	20297754	20298087	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20298088	20302320	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20302321	20302458	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20302459	20498773	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20498774	20498836	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20498837	20501215	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20501216	20501304	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03209_ch_T0000548;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000548:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20297754	20502822	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000549;Name=TTTY14
HG03209_chrY	CAT	exon	20297754	20298087	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20298088	20358011	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20358012	20358110	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20358111	20358625	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20358626	20358744	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20358745	20493998	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20493999	20494073	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000549:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20494074	20502319	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000549:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20502320	20502822	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03209_ch_T0000549;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000549:4;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20297754	20502822	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000550;Name=TTTY14
HG03209_chrY	CAT	exon	20297754	20298087	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20298088	20302320	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20302321	20302458	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20302459	20493998	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20493999	20494073	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000550:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20494074	20502319	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000550:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20502320	20502822	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03209_ch_T0000550;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000550:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20297754	20502822	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000551;Name=TTTY14
HG03209_chrY	CAT	exon	20297754	20298087	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20298088	20302320	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20302321	20302458	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20302459	20502319	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20502320	20502822	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03209_ch_T0000551;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20357276	20501304	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000552;Name=TTTY14
HG03209_chrY	CAT	exon	20357276	20358110	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20358111	20469811	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20469812	20469965	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20469966	20470511	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20470512	20470561	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20470562	20493998	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20493999	20494073	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000552:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20494074	20501215	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000552:3;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20501216	20501304	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03209_ch_T0000552;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000552:4;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20357720	20501278	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000553;Name=TTTY14
HG03209_chrY	CAT	exon	20357720	20358110	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20358111	20493998	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20493999	20494073	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20494074	20501215	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20501216	20501278	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03209_ch_T0000553;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000553:2;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20357720	20502822	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03209_ch_T0000554;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_G0000195;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03209_ch_T0000554;Name=TTTY14
HG03209_chrY	CAT	exon	20357720	20358110	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03209_ch_T0000554;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20358111	20502319	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03209_ch_T0000554;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03209_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20502320	20502822	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03209_ch_T0000554;gene_id=HG03209_ch_G0000195;Parent=HG03209_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03209_ch_T0000554:1;Name=TTTY14;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20505131	20514153	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG03209_ch_G0000196;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG03209_ch_G0000196;Name=LOC124905306
HG03209_chrY	CAT	transcript	20505131	20514153	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03209_ch_T0000555;gene_id=HG03209_ch_G0000196;Parent=HG03209_ch_G0000196;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG03209_ch_T0000555;Name=LOC124905306
HG03209_chrY	CAT	exon	20505131	20506000	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03209_ch_T0000555;gene_id=HG03209_ch_G0000196;Parent=HG03209_ch_T0000555;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03209_ch_T0000555:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20506001	20511774	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03209_ch_T0000555;gene_id=HG03209_ch_G0000196;Parent=HG03209_ch_T0000555;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG03209_ch_T0000555:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20511775	20514153	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03209_ch_T0000555;gene_id=HG03209_ch_G0000196;Parent=HG03209_ch_T0000555;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03209_ch_T0000555:1;Name=LOC124905306;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20881056	20928777	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG03209_ch_G0000197;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG03209_ch_G0000197;Name=BCORP1
HG03209_chrY	CAT	transcript	20881056	20928777	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_G0000197;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03209_ch_T0000556;Name=BCORP1
HG03209_chrY	CAT	exon	20881056	20882489	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:0;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20882490	20884543	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:0;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20884544	20884699	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:1;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20884700	20884908	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:1;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20884909	20884986	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:2;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20884987	20890724	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:2;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20890725	20890846	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:3;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20890847	20892074	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:3;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20892075	20892993	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:4;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20892994	20899523	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:4;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20899524	20899763	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:5;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20899764	20900258	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:5;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20900259	20900522	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:6;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20900523	20905787	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:6;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20905788	20905913	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:7;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20905914	20928655	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000556:7;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20928656	20928777	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03209_ch_T0000556;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000556:8;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20881056	20928777	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_G0000197;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03209_ch_T0000557;Name=BCORP1
HG03209_chrY	CAT	exon	20881056	20882489	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:0;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20882490	20882681	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:0;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20882682	20882742	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:1;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20882743	20884543	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:1;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20884544	20884699	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:2;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20884700	20884908	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:2;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20884909	20884986	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:3;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20884987	20885578	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:3;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20885579	20885724	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:4;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20885725	20890724	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:4;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20890725	20890846	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:5;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20890847	20892074	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:5;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20892075	20892993	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:6;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20892994	20899523	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:6;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20899524	20899763	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:7;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20899764	20900258	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:7;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20900259	20900522	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:8;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20900523	20905787	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:8;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20905788	20905913	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:9;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20905914	20928655	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03209_ch_T0000557:9;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20928656	20928777	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03209_ch_T0000557;gene_id=HG03209_ch_G0000197;Parent=HG03209_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03209_ch_T0000557:10;Name=BCORP1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20907235	20909074	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG03209_ch_G0000198;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000198;Name=LOC102723934
HG03209_chrY	CAT	transcript	20907235	20909074	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_G0000198;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG03209_ch_T0000558;Name=LOC102723934
HG03209_chrY	CAT	exon	20907235	20907623	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03209_ch_T0000558:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20907235	20907623	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03209_ch_T0000558:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	20907235	20907237	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG03209_ch_T0000558;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20907624	20907935	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03209_ch_T0000558:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20907936	20907947	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03209_ch_T0000558:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20907936	20907947	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03209_ch_T0000558:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20907948	20908027	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03209_ch_T0000558:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20908028	20909074	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03209_ch_T0000558:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	20908028	20909051	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03209_ch_T0000558:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	20909049	20909051	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000558;gene_id=HG03209_ch_G0000198;Parent=HG03209_ch_T0000558;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG03209_ch_T0000558;Name=LOC102723934;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20979490	20992598	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG03209_ch_G0000199;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG03209_ch_G0000199;Name=LOC105377223
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000559;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20982401	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000559:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982402	20982818	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000559:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20982819	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000559:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983612	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000559:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983613	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000559:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20992570	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000559:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20992571	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03209_ch_T0000559;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000559:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000560;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20982401	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982402	20982818	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20982819	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983628	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983629	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20992570	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20992571	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03209_ch_T0000560;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000560:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000561;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20982401	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982402	20982818	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20982819	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983612	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983613	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20984928	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20984929	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03209_ch_T0000561;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000561:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000562;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20981145	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20981146	20982818	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20982819	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983628	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983629	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20984928	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20984929	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03209_ch_T0000562;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000562:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000563;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20981145	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20981146	20982818	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20982819	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983612	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983613	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20992570	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20992571	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03209_ch_T0000563;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000563:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000564;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983612	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983613	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20984928	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20984929	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03209_ch_T0000564;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20979490	20992598	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_G0000199;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03209_ch_T0000565;Name=LOC105377223
HG03209_chrY	CAT	exon	20979490	20982878	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20982879	20983612	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20983613	20983729	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20983730	20992570	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03209_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	20992571	20992598	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03209_ch_T0000565;gene_id=HG03209_ch_G0000199;Parent=HG03209_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03209_ch_T0000565:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	20992947	21032761	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG03209_ch_G0000200;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG03209_ch_G0000200;Name=TXLNGY
HG03209_chrY	CAT	transcript	20992947	21016012	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_G0000200;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03209_ch_T0000566;Name=TXLNGY
HG03209_chrY	CAT	exon	20992947	20993071	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000566:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20993072	21012798	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000566:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21012799	21013096	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000566:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21013097	21015109	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000566:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21015110	21015201	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000566:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21015202	21015671	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000566:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21015672	21016012	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03209_ch_T0000566;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000566:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	20992947	21032761	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_G0000200;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03209_ch_T0000567;Name=TXLNGY
HG03209_chrY	CAT	exon	20992947	20993071	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	20993072	21012798	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21012799	21013096	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21013097	21015109	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21015110	21015201	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21015202	21017368	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21017369	21017548	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21017549	21018987	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21018988	21019182	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21019183	21021603	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21021604	21021723	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21021724	21023183	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21023184	21023258	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21023259	21025331	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21025332	21025424	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21025425	21027808	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21027809	21027904	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21027905	21029389	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03209_ch_T0000567:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21029390	21032761	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03209_ch_T0000567;gene_id=HG03209_ch_G0000200;Parent=HG03209_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03209_ch_T0000567:9;Name=TXLNGY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	21129453	21170314	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG03209_ch_G0000201;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000201;Name=KDM5D
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000568;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000568;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21148928	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21148929	21149021	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21148929	21149021	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21149022	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000568:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000568;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000568:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000568;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000568:27;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000569;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133909	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133910	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133910	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135166	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135166	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135167	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000569;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000569:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000570;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135166	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135166	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135167	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000570;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000570:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000571;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133909	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133910	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133910	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135166	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135166	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135167	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000571;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000571:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000572;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000572;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000573;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000573;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000573:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000574;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000574;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000575;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135166	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135166	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135167	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000575;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000575:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000576;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133909	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133910	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133910	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000576;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000576:26;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21129453	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000577;Name=KDM5D
HG03209_chrY	CAT	exon	21129453	21131933	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21131583	21131933	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21131583	21131585	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21131934	21132028	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132029	21132228	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132029	21132228	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132229	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133909	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133910	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133910	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000577;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21132066	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000578;Name=KDM5D
HG03209_chrY	CAT	exon	21132066	21132196	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132168	21132196	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21132168	21132170	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132197	21132381	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132382	21132451	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132382	21132451	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21132452	21132734	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21132735	21133334	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21132735	21133334	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133335	21133521	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133522	21133659	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133522	21133659	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21133660	21133831	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21133832	21134011	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21133832	21134011	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134012	21134462	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21134463	21134601	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21134463	21134601	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21134602	21135038	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135039	21135397	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135039	21135397	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135398	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000578;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000578:25;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21135048	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000579;Name=KDM5D
HG03209_chrY	CAT	exon	21135048	21135848	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135765	21135848	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21135765	21135767	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21135849	21135963	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21135964	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21135964	21136060	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21140939	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21140940	21141087	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21140940	21141087	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141088	21141202	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141203	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141203	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000579;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21135988	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000580;Name=KDM5D
HG03209_chrY	CAT	exon	21135988	21136060	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21136061	21141171	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141172	21141327	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141195	21141327	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21141195	21141197	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141328	21141410	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141411	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141411	21141592	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000580;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21141459	21170314	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_G0000201;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03209_ch_T0000581;Name=KDM5D
HG03209_chrY	CAT	exon	21141459	21141592	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141576	21141592	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21141576	21141578	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03209_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141593	21141686	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141687	21141699	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141687	21141699	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21141700	21141866	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21141867	21142061	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21141867	21142061	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142062	21142183	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21142184	21142303	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21142184	21142303	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21142304	21146459	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146460	21146622	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146460	21146622	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146623	21146717	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21146718	21146899	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21146718	21146899	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21146900	21157359	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157360	21157518	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157360	21157518	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157519	21157633	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21157634	21157753	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21157634	21157753	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21157754	21158171	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21158172	21158330	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21158172	21158330	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21158331	21160939	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21160940	21161085	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21160940	21161085	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161086	21161208	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21161209	21161338	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21161209	21161338	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21161339	21165115	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21165116	21165250	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21165116	21165250	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21165251	21166905	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21166906	21167076	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21166906	21167076	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167077	21167322	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21167323	21167445	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21167323	21167445	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21167446	21168749	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21168750	21168827	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21168750	21168827	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21168828	21169972	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21169973	21170141	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21169973	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03209_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21170120	21170122	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03209_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21170142	21170258	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03209_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21170259	21170314	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000581;gene_id=HG03209_ch_G0000201;Parent=HG03209_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03209_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	21170344	21183036	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG03209_ch_G0000202;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG03209_ch_G0000202;Name=LOC105377224
HG03209_chrY	CAT	transcript	21170344	21183143	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_G0000202;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03209_ch_T0000582;Name=LOC105377224
HG03209_chrY	CAT	exon	21170344	21171301	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000582:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21171302	21180212	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000582:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180213	21180402	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000582:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21180403	21180791	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000582:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180792	21183143	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03209_ch_T0000582;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000582:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21170373	21184658	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_G0000202;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03209_ch_T0000583;Name=LOC105377224
HG03209_chrY	CAT	exon	21170373	21171301	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21171302	21180313	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180314	21180402	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21180403	21180791	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180792	21184658	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03209_ch_T0000583;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000583:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21170426	21183036	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_G0000202;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03209_ch_T0000584;Name=LOC105377224
HG03209_chrY	CAT	exon	21170426	21171301	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000584:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21171302	21180313	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000584:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180314	21180402	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000584:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21180403	21180791	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000584:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21180792	21180911	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000584:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21180912	21182229	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03209_ch_T0000584:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21182230	21183036	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03209_ch_T0000584;gene_id=HG03209_ch_G0000202;Parent=HG03209_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03209_ch_T0000584:3;Name=LOC105377224;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	21834860	21888410	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG03209_ch_G0000203;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG03209_ch_G0000203;Name=TTTY10
HG03209_chrY	CAT	transcript	21834860	21888410	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_G0000203;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG03209_ch_T0000585;Name=TTTY10
HG03209_chrY	CAT	exon	21834860	21835014	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:0;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21835015	21835619	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03209_ch_T0000585:0;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21835620	21835859	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:1;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21835860	21837380	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03209_ch_T0000585:1;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21837381	21837440	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:2;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21837441	21839063	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03209_ch_T0000585:2;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21839064	21839173	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:3;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21839174	21876533	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03209_ch_T0000585:3;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21876534	21876638	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:4;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21876639	21887452	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03209_ch_T0000585:4;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21887453	21888410	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03209_ch_T0000585;gene_id=HG03209_ch_G0000203;Parent=HG03209_ch_T0000585;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03209_ch_T0000585:5;Name=TTTY10;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	21944957	21962336	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG03209_ch_G0000204;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000204;Name=EIF1AY
HG03209_chrY	CAT	transcript	21944957	21962336	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_G0000204;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03209_ch_T0000586;Name=EIF1AY
HG03209_chrY	CAT	exon	21944957	21945068	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21945053	21945068	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21945053	21945055	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03209_ch_T0000586;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21945069	21948788	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21948789	21948872	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21948789	21948872	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21948873	21951770	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21951771	21951874	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21951771	21951874	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21951875	21957205	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21957206	21957287	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21957206	21957287	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21957288	21958665	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21958666	21958757	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21958666	21958757	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21958758	21961522	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21961523	21962336	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000586:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21961523	21961528	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000586:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21961526	21961528	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000586;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03209_ch_T0000586;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	21944957	21962336	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_G0000204;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03209_ch_T0000587;Name=EIF1AY
HG03209_chrY	CAT	exon	21944957	21945068	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21945053	21945068	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	21945053	21945055	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03209_ch_T0000587;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21945069	21948788	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21948789	21948872	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21948789	21948872	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21948873	21951770	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21951771	21951874	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21951771	21951874	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21951875	21953655	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21953656	21953706	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21953656	21953706	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21953707	21957205	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21957206	21957287	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21957206	21957287	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21957288	21958665	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21958666	21958757	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21958666	21958757	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	21958758	21961522	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03209_ch_T0000587:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	21961523	21962336	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03209_ch_T0000587:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	21961523	21961528	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03209_ch_T0000587:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	21961526	21961528	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000587;gene_id=HG03209_ch_G0000204;Parent=HG03209_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03209_ch_T0000587;Name=EIF1AY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22125295	22150218	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG03209_ch_G0000205;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000205;Name=RPS4Y2
HG03209_chrY	CAT	transcript	22125295	22150218	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_G0000205;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG03209_ch_T0000588;Name=RPS4Y2
HG03209_chrY	CAT	exon	22125295	22125353	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22125351	22125353	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22125351	22125353	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG03209_ch_T0000588;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22125354	22125964	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22125965	22126042	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22125965	22126042	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22126043	22129053	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22129054	22129234	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22129054	22129234	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22129235	22130469	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22130470	22130567	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22130470	22130567	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22130568	22137990	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22137991	22138162	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22137991	22138162	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22138163	22148694	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22148695	22148852	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22148695	22148852	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22148853	22150116	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03209_ch_T0000588:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22150117	22150218	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03209_ch_T0000588:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22150117	22150218	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03209_ch_T0000588:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22150216	22150218	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000588;gene_id=HG03209_ch_G0000205;Parent=HG03209_ch_T0000588;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG03209_ch_T0000588;Name=RPS4Y2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22507856	22542206	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG03209_ch_G0000206;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG03209_ch_G0000206;Name=LOC105377225
HG03209_chrY	CAT	transcript	22507856	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000589;Name=LOC105377225
HG03209_chrY	CAT	exon	22507856	22508091	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22508092	22517401	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000589:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517402	22517452	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517453	22517644	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000589:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517645	22517739	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517740	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000589:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000589:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000589:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03209_ch_T0000589;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000589:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22507856	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000590;Name=LOC105377225
HG03209_chrY	CAT	exon	22507856	22508091	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22508092	22517644	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517645	22517739	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517740	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03209_ch_T0000590;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000590:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22507856	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000591;Name=LOC105377225
HG03209_chrY	CAT	exon	22507856	22508091	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22508092	22517767	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517768	22517821	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517822	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03209_ch_T0000591;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000591:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22507856	22542206	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000592;Name=LOC105377225
HG03209_chrY	CAT	exon	22507856	22508091	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22508092	22514005	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22514006	22514097	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22514098	22517401	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517402	22517452	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517453	22517644	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517645	22517739	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517740	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000592:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22542206	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03209_ch_T0000592;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000592:6;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22513265	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000593;Name=LOC105377225
HG03209_chrY	CAT	exon	22513265	22517452	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517453	22517644	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517645	22517821	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517822	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03209_ch_T0000593;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22513265	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000594;Name=LOC105377225
HG03209_chrY	CAT	exon	22513265	22517452	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517453	22517767	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517768	22517821	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517822	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22522061	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22522062	22522196	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22522197	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03209_ch_T0000594;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000594:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22513265	22539451	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_G0000206;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03209_ch_T0000595;Name=LOC105377225
HG03209_chrY	CAT	exon	22513265	22517452	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517453	22517644	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22517645	22517821	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22517822	22520811	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22520812	22520865	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22520866	22521902	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22521903	22521994	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22521995	22539187	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03209_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22539188	22539451	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03209_ch_T0000595;gene_id=HG03209_ch_G0000206;Parent=HG03209_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03209_ch_T0000595:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22597369	22622605	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG03209_ch_G0000207;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG03209_ch_G0000207;Name=LOC107987346
HG03209_chrY	CAT	transcript	22597369	22622605	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_G0000207;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03209_ch_T0000596;Name=LOC107987346
HG03209_chrY	CAT	exon	22597369	22597406	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000596:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22597407	22597583	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03209_ch_T0000596:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22597584	22597691	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000596:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22597692	22619780	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03209_ch_T0000596:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22619781	22622605	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03209_ch_T0000596;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000596:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22597369	22622605	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_G0000207;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03209_ch_T0000597;Name=LOC107987346
HG03209_chrY	CAT	exon	22597369	22597406	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000597:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22597407	22597583	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03209_ch_T0000597:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22597584	22597691	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000597:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22597692	22619780	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03209_ch_T0000597:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22619781	22619939	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000597:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22619940	22622353	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03209_ch_T0000597:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22622354	22622605	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03209_ch_T0000597;gene_id=HG03209_ch_G0000207;Parent=HG03209_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03209_ch_T0000597:3;Name=LOC107987346;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22617296	22672237	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG03209_ch_G0000208;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG03209_ch_G0000208;Name=LOC107987347
HG03209_chrY	CAT	transcript	22617296	22672237	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_G0000208;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG03209_ch_T0000598;Name=LOC107987347
HG03209_chrY	CAT	exon	22617296	22618381	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_T0000598;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03209_ch_T0000598:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22618382	22665381	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_T0000598;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03209_ch_T0000598:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22665382	22665447	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_T0000598;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03209_ch_T0000598:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22665448	22671787	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_T0000598;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03209_ch_T0000598:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22671788	22672237	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03209_ch_T0000598;gene_id=HG03209_ch_G0000208;Parent=HG03209_ch_T0000598;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03209_ch_T0000598:2;Name=LOC107987347;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22751133	22821076	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG03209_ch_G0000209;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG03209_ch_G0000209;Name=PRORY
HG03209_chrY	CAT	transcript	22751133	22821076	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_G0000209;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG03209_ch_T0000599;Name=PRORY
HG03209_chrY	CAT	exon	22751133	22752507	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03209_ch_T0000599:0;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22752508	22752658	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03209_ch_T0000599:0;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22752659	22753023	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03209_ch_T0000599:1;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22753024	22753139	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03209_ch_T0000599:1;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22753140	22753196	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03209_ch_T0000599:2;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22753197	22755458	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03209_ch_T0000599:2;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22755459	22755583	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03209_ch_T0000599:3;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22755584	22820873	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03209_ch_T0000599:3;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22820874	22821076	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03209_ch_T0000599;gene_id=HG03209_ch_G0000209;Parent=HG03209_ch_T0000599;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03209_ch_T0000599:4;Name=PRORY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22764375	22770793	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG03209_ch_G0000210;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG03209_ch_G0000210;Name=RBMY2EP
HG03209_chrY	CAT	transcript	22764375	22770793	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_G0000210;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG03209_ch_T0000600;Name=RBMY2EP
HG03209_chrY	CAT	exon	22764375	22764518	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03209_ch_T0000600:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22764519	22764926	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03209_ch_T0000600:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22764927	22765015	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03209_ch_T0000600:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22765016	22765097	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03209_ch_T0000600:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22765098	22765208	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03209_ch_T0000600:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22765209	22770153	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03209_ch_T0000600:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22770154	22770257	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03209_ch_T0000600:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22770258	22770707	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03209_ch_T0000600:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22770708	22770793	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03209_ch_T0000600;gene_id=HG03209_ch_G0000210;Parent=HG03209_ch_T0000600;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03209_ch_T0000600:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22880567	22895010	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=HG03209_ch_G0000211;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000211;Name=RBMY1A1
HG03209_chrY	CAT	transcript	22880567	22894022	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_G0000211;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000601;Name=RBMY1A1
HG03209_chrY	CAT	exon	22880567	22880714	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22880715	22882575	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22882576	22882688	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22882580	22882688	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22882580	22882582	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000601;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22882689	22883158	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22883159	22883262	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22883159	22883262	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22883263	22886281	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22886282	22886459	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22886282	22886459	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22886460	22888374	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22888375	22888527	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22888375	22888527	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22888528	22890537	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22890538	22890652	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22890538	22890652	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22890653	22891607	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22891608	22891718	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22891608	22891718	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22891719	22892159	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892160	22892270	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892160	22892270	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892271	22892704	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892705	22892815	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892705	22892815	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892816	22893736	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893737	22893847	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893737	22893847	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22893848	22893933	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893934	22894022	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000601:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893934	22894021	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22894019	22894021	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000601;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000601;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22880567	22895010	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_G0000211;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000602;Name=RBMY1A1
HG03209_chrY	CAT	exon	22880567	22880714	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22880715	22882575	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22882576	22882688	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22882580	22882688	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22882580	22882582	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22882689	22883158	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22883159	22883262	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22883159	22883262	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22883263	22886281	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22886282	22886459	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22886282	22886459	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22886460	22888374	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22888375	22888527	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22888375	22888527	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22888528	22890537	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22890538	22890652	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22890538	22890652	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22890653	22891607	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22891608	22891718	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22891608	22891718	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22891719	22892159	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892160	22892270	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892160	22892270	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892271	22892704	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892705	22892815	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892705	22892815	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892816	22893933	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893934	22894022	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893934	22894022	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22894023	22894433	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22894434	22895010	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000602:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22894434	22894732	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22894730	22894732	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000602;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22880567	22895010	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_G0000211;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000603;Name=RBMY1A1
HG03209_chrY	CAT	exon	22880567	22880714	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22880715	22882575	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22882576	22882688	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22882689	22883158	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22883159	22883262	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22883263	22888374	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22888375	22888527	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22888404	22888527	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22888404	22888406	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22888528	22890537	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22890538	22890652	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22890538	22890652	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22890653	22891607	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22891608	22891718	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22891608	22891718	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22891719	22892159	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892160	22892270	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892160	22892270	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892271	22892704	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892705	22892815	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892705	22892815	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892816	22893736	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893737	22893847	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893737	22893847	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22893848	22893933	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893934	22894022	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893934	22894022	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22894023	22894433	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22894434	22895010	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000603:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22894434	22894732	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22894730	22894732	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000603;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22880567	22895010	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_G0000211;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000604;Name=RBMY1A1
HG03209_chrY	CAT	exon	22880567	22880714	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22880715	22882575	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22882576	22882688	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22882580	22882688	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22882580	22882582	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22882689	22883158	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22883159	22883262	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22883159	22883262	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22883263	22886281	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22886282	22886459	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22886282	22886459	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22886460	22888374	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22888375	22888527	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22888375	22888527	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22888528	22890537	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22890538	22890652	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22890538	22890652	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22890653	22891607	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22891608	22891718	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22891608	22891718	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22891719	22892159	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892160	22892270	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892160	22892270	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892271	22892704	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22892705	22892815	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22892705	22892815	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22892816	22893736	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893737	22893847	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893737	22893847	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22893848	22893933	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22893934	22894022	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22893934	22894022	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22894023	22894433	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22894434	22895010	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000604:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22894434	22894732	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22894730	22894732	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000604;gene_id=HG03209_ch_G0000211;Parent=HG03209_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22897882	22930193	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG03209_ch_G0000212;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000212;Name=RBMY1D
HG03209_chrY	CAT	transcript	22897882	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000605;Name=RBMY1D
HG03209_chrY	CAT	exon	22897882	22897902	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22897903	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000605;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917273	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917274	22917384	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917274	22917384	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917385	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000605:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000605:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000605:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000605;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000605;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000605;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000606;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000606;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917273	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917274	22917384	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917274	22917384	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917385	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000606:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000606:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000606:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000606;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000606;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000606;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000607;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000607;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000607:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000607:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000607:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000607;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000607;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000607;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000608;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22904922	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22904923	22904987	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904988	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906173	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906173	22906175	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000608;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906709	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906710	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906710	22906799	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000608:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000608:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000608:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000608;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000608;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000608;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000609;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000609;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000609:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000609:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000609;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000609;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000609;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22919966	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000610;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000610;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917273	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917274	22917384	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917274	22917384	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917385	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22918807	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22918808	22919966	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000610:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22918808	22918815	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000610:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918813	22918815	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000610;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000610;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000610;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22904102	22930193	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000611;Name=RBMY1D
HG03209_chrY	CAT	exon	22904102	22904249	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22904250	22906110	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906111	22906223	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906115	22906223	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22906115	22906117	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000611;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906224	22906695	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22906696	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22906696	22906799	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22909818	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22909819	22909996	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22909819	22909996	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22909997	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911912	22912064	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917273	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917274	22917384	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917274	22917384	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917385	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22928809	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000611:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22928810	22930193	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000611:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22928810	22928886	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000611:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22928884	22928886	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000611;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000611;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000611;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	22906710	22918548	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03209_ch_T0000612;Name=RBMY1D
HG03209_chrY	CAT	exon	22906710	22906799	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22906800	22911911	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22911912	22912064	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22911941	22912064	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	22911941	22911943	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03209_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22912065	22914074	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22914075	22914189	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22914075	22914189	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22914190	22915144	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915145	22915255	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915145	22915255	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915256	22915696	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22915697	22915807	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22915697	22915807	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22915808	22916241	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22916242	22916352	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22916242	22916352	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22916353	22917273	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917274	22917384	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917274	22917384	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917385	22917471	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917472	22917560	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917472	22917560	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22917561	22917971	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03209_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22917972	22918548	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03209_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	22917972	22918270	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03209_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	22918268	22918270	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000612;gene_id=HG03209_ch_G0000212;Parent=HG03209_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03209_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22938243	22940495	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG03209_ch_G0000213;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03209_ch_G0000213;Name=LOC105379266
HG03209_chrY	CAT	transcript	22938243	22940495	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000613;gene_id=HG03209_ch_G0000213;Parent=HG03209_ch_G0000213;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG03209_ch_T0000613;Name=LOC105379266
HG03209_chrY	CAT	exon	22938243	22939523	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000613;gene_id=HG03209_ch_G0000213;Parent=HG03209_ch_T0000613;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03209_ch_T0000613:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22939524	22940200	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000613;gene_id=HG03209_ch_G0000213;Parent=HG03209_ch_T0000613;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG03209_ch_T0000613:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22940201	22940495	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03209_ch_T0000613;gene_id=HG03209_ch_G0000213;Parent=HG03209_ch_T0000613;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03209_ch_T0000613:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	22952802	22963868	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG03209_ch_G0000214;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG03209_ch_G0000214;Name=TTTY13
HG03209_chrY	CAT	transcript	22952802	22963868	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_G0000214;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG03209_ch_T0000614;Name=TTTY13
HG03209_chrY	CAT	exon	22952802	22952864	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:0;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22952865	22953984	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03209_ch_T0000614:0;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22953985	22954076	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:1;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22954077	22956702	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03209_ch_T0000614:1;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22956703	22956864	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:2;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22956865	22958473	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03209_ch_T0000614:2;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22958474	22958572	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:3;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22958573	22959167	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03209_ch_T0000614:3;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22959168	22959329	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:4;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	22959330	22963787	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03209_ch_T0000614:4;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	22963788	22963868	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03209_ch_T0000614;gene_id=HG03209_ch_G0000214;Parent=HG03209_ch_T0000614;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03209_ch_T0000614:5;Name=TTTY13;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23138617	23153268	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG03209_ch_G0000215;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG03209_ch_G0000215;Name=LOC105377236
HG03209_chrY	CAT	transcript	23138617	23152042	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03209_ch_T0000615;Name=LOC105377236
HG03209_chrY	CAT	exon	23138617	23140160	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000615:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23140161	23147539	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000615:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23147540	23147675	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000615:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23147676	23150671	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000615:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23150672	23150833	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000615:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23150834	23151077	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000615:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23151078	23152042	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03209_ch_T0000615;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000615;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000615:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23138617	23152042	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03209_ch_T0000616;Name=LOC105377236
HG03209_chrY	CAT	exon	23138617	23140160	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000616:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23140161	23147539	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000616:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23147540	23147675	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000616:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23147676	23150671	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000616:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23150672	23150746	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000616:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23150747	23151077	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000616:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23151078	23152042	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03209_ch_T0000616;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000616;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000616:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23138617	23153268	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03209_ch_T0000617;Name=LOC105377236
HG03209_chrY	CAT	exon	23138617	23140160	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000617:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23140161	23147539	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000617:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23147540	23147675	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000617:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23147676	23150671	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000617:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23150672	23150833	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000617:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23150834	23151077	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000617:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23151078	23151863	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000617:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23151864	23153112	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03209_ch_T0000617:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23153113	23153268	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03209_ch_T0000617;gene_id=HG03209_ch_G0000215;Parent=HG03209_ch_T0000617;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03209_ch_T0000617:4;Name=LOC105377236;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23165731	23168619	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG03209_ch_G0000216;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG03209_ch_G0000216;Name=LOC105377237
HG03209_chrY	CAT	transcript	23165731	23168619	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_G0000216;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG03209_ch_T0000618;Name=LOC105377237
HG03209_chrY	CAT	exon	23165731	23166968	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_T0000618;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03209_ch_T0000618:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23166969	23168140	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_T0000618;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03209_ch_T0000618:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23168141	23168300	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_T0000618;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03209_ch_T0000618:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23168301	23168460	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_T0000618;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03209_ch_T0000618:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23168461	23168619	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03209_ch_T0000618;gene_id=HG03209_ch_G0000216;Parent=HG03209_ch_T0000618;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03209_ch_T0000618:2;Name=LOC105377237;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23209524	23223973	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=HG03209_ch_G0000217;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000217;Name=RBMY1A1
HG03209_chrY	CAT	transcript	23209524	23223973	1000	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_G0000217;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000619;Name=RBMY1A1
HG03209_chrY	CAT	exon	23209524	23210100	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23209802	23210100	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23209802	23209804	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000619;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210101	23210511	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210512	23210600	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210512	23210600	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210601	23211718	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23211719	23211829	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23211719	23211829	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23211830	23212263	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212264	23212374	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212264	23212374	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212375	23212815	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212816	23212926	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212816	23212926	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212927	23213881	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23213882	23213996	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23213882	23213996	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23213997	23216006	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23216007	23216159	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23216007	23216159	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23216160	23218074	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23218075	23218252	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23218075	23218252	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23218253	23221271	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221272	23221375	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221272	23221375	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221376	23221851	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221852	23221964	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221852	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000619:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23221958	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000619;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221965	23223825	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000619:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23223826	23223973	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000619;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000619;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000619:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23209524	23223973	1000	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_G0000217;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000620;Name=RBMY1A1
HG03209_chrY	CAT	exon	23209524	23210100	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23209802	23210100	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23209802	23209804	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000620;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210101	23210511	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210512	23210600	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210512	23210600	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210601	23210686	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210687	23210797	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210687	23210797	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210798	23211718	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23211719	23211829	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23211719	23211829	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23211830	23212263	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212264	23212374	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212264	23212374	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212375	23212815	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212816	23212926	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212816	23212926	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212927	23213881	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23213882	23213996	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23213882	23213996	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23213997	23216006	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23216007	23216159	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23216007	23216130	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000620:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23216128	23216130	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000620;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23216160	23221271	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221272	23221375	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221376	23221851	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221852	23221964	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221965	23223825	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000620:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23223826	23223973	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000620;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000620;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000620:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23209524	23223973	1000	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_G0000217;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000621;Name=RBMY1A1
HG03209_chrY	CAT	exon	23209524	23210100	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23209802	23210100	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23209802	23209804	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000621;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210101	23210511	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210512	23210600	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210512	23210600	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210601	23210686	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210687	23210797	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210687	23210797	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210798	23211718	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23211719	23211829	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23211719	23211829	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23211830	23212263	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212264	23212374	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212264	23212374	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212375	23212815	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212816	23212926	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212816	23212926	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212927	23213881	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23213882	23213996	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23213882	23213996	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23213997	23216006	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23216007	23216159	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23216007	23216159	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23216160	23218074	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23218075	23218252	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23218075	23218252	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23218253	23221271	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221272	23221375	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221272	23221375	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221376	23221851	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221852	23221964	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221852	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000621:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23221958	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000621;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221965	23223825	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000621:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23223826	23223973	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000621;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000621;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000621:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23210512	23223973	1000	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_G0000217;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03209_ch_T0000622;Name=RBMY1A1
HG03209_chrY	CAT	exon	23210512	23210600	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210513	23210600	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23210513	23210515	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03209_ch_T0000622;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210601	23210686	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23210687	23210797	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23210687	23210797	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23210798	23211718	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23211719	23211829	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23211719	23211829	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23211830	23212263	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212264	23212374	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212264	23212374	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212375	23212815	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23212816	23212926	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23212816	23212926	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23212927	23213881	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23213882	23213996	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23213882	23213996	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23213997	23216006	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23216007	23216159	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23216007	23216159	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23216160	23218074	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23218075	23218252	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23218075	23218252	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23218253	23221271	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221272	23221375	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221272	23221375	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221376	23221851	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23221852	23221964	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23221852	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03209_ch_T0000622:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23221958	23221960	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03209_ch_T0000622;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23221965	23223825	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03209_ch_T0000622:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23223826	23223973	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000622;gene_id=HG03209_ch_G0000217;Parent=HG03209_ch_T0000622;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03209_ch_T0000622:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23231625	23247476	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG03209_ch_G0000218;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000218;Name=RBMY1E
HG03209_chrY	CAT	transcript	23231625	23247476	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03209_ch_T0000623;Name=RBMY1E
HG03209_chrY	CAT	exon	23231625	23232806	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23232799	23232806	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23232799	23232801	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03209_ch_T0000623;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23232807	23234053	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234054	23234142	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234054	23234142	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234143	23234228	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234229	23234339	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234229	23234339	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234340	23235260	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235261	23235371	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235261	23235371	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235372	23235805	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235806	23235916	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235806	23235916	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235917	23236357	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23236358	23236468	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23236358	23236468	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23236469	23237423	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23237424	23237538	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23237424	23237538	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23237539	23239548	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23239549	23239701	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23239549	23239701	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23239702	23241616	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23241617	23241794	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23241617	23241794	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23241795	23244813	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23244814	23244917	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23244814	23244917	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23244918	23245389	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23245390	23245502	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23245390	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000623:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23245496	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03209_ch_T0000623;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23245503	23247363	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000623:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23247364	23247476	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000623;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000623;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000623:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23233070	23244904	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03209_ch_T0000624;Name=RBMY1E
HG03209_chrY	CAT	exon	23233070	23233642	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23233344	23233642	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23233344	23233346	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03209_ch_T0000624;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23233643	23234053	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234054	23234142	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234054	23234142	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234143	23234228	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234229	23234339	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234229	23234339	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234340	23235260	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235261	23235371	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235261	23235371	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235372	23235805	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235806	23235916	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235806	23235916	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235917	23236357	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23236358	23236468	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23236358	23236468	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23236469	23237423	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23237424	23237538	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23237424	23237538	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23237539	23239548	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23239549	23239701	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23239549	23239672	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000624:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23239670	23239672	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03209_ch_T0000624;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23239702	23244813	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000624:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23244814	23244904	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000624;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000624;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000624:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23233070	23247476	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03209_ch_T0000625;Name=RBMY1E
HG03209_chrY	CAT	exon	23233070	23233642	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23233344	23233642	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23233344	23233346	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03209_ch_T0000625;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23233643	23234053	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234054	23234142	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234054	23234142	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234143	23234228	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234229	23234339	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234229	23234339	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234340	23235260	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235261	23235371	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235261	23235371	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235372	23235805	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235806	23235916	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235806	23235916	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235917	23236357	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23236358	23236468	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23236358	23236468	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23236469	23237423	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23237424	23237538	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23237424	23237538	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23237539	23239548	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23239549	23239701	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23239549	23239701	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23239702	23241616	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23241617	23241794	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23241617	23241794	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23241795	23244813	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23244814	23244917	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23244814	23244917	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23244918	23245389	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23245390	23245502	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23245390	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000625:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23245496	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03209_ch_T0000625;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23245503	23247363	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000625:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23247364	23247476	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000625;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000625;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000625:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23233070	23247476	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03209_ch_T0000626;Name=RBMY1E
HG03209_chrY	CAT	exon	23233070	23233642	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23233344	23233642	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23233344	23233346	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03209_ch_T0000626;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23233643	23234053	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234054	23234142	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234054	23234142	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234143	23235260	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235261	23235371	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235261	23235371	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235372	23235805	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23235806	23235916	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23235806	23235916	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23235917	23236357	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23236358	23236468	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23236358	23236468	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23236469	23237423	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23237424	23237538	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23237424	23237538	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23237539	23239548	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23239549	23239701	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23239549	23239701	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23239702	23241616	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23241617	23241794	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23241617	23241794	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23241795	23244813	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23244814	23244917	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23244814	23244917	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23244918	23245389	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23245390	23245502	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23245390	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000626:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23245496	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03209_ch_T0000626;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23245503	23247363	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000626:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23247364	23247476	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000626;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000626;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000626:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23233070	23247476	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03209_ch_T0000627;Name=RBMY1E
HG03209_chrY	CAT	exon	23233070	23233642	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23233344	23233642	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23233344	23233346	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03209_ch_T0000627;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23233643	23234053	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23234054	23234142	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23234054	23234142	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23234143	23236357	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23236358	23236468	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23236358	23236468	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23236469	23237423	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23237424	23237538	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23237424	23237538	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23237539	23239548	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23239549	23239701	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23239549	23239701	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23239702	23241616	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23241617	23241794	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23241617	23241794	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23241795	23244813	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23244814	23244917	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23244814	23244917	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23244918	23245389	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23245390	23245502	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23245390	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03209_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23245496	23245498	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03209_ch_T0000627;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23245503	23247363	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03209_ch_T0000627:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23247364	23247476	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000627;gene_id=HG03209_ch_G0000218;Parent=HG03209_ch_T0000627;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03209_ch_T0000627:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23357763	23359790	.	+	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;gene_id=HG03209_ch_G0000219;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG03209_ch_G0000219;Name=LOC107987356
HG03209_chrY	CAT	transcript	23357763	23359790	1000	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_G0000219;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG03209_ch_T0000628;Name=LOC107987356
HG03209_chrY	CAT	exon	23357763	23357875	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_T0000628;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03209_ch_T0000628:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23357876	23357992	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_T0000628;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03209_ch_T0000628:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23357993	23358053	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_T0000628;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03209_ch_T0000628:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23358054	23359588	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_T0000628;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03209_ch_T0000628:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23359589	23359790	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03209_ch_T0000628;gene_id=HG03209_ch_G0000219;Parent=HG03209_ch_T0000628;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03209_ch_T0000628:2;Name=LOC107987356;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23401196	23425448	.	-	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;gene_id=HG03209_ch_G0000220;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff;ID=HG03209_ch_G0000220;Name=PRY2
HG03209_chrY	CAT	transcript	23401196	23425448	100	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_G0000220;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG03209_ch_T0000629;Name=PRY2
HG03209_chrY	CAT	exon	23401196	23402021	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03209_ch_T0000629:0;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23401763	23402021	.	-	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03209_ch_T0000629:0;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23401763	23401765	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG03209_ch_T0000629;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23402022	23411519	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03209_ch_T0000629:0;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23411520	23411635	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03209_ch_T0000629:1;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23411520	23411635	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03209_ch_T0000629:1;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23411636	23414210	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03209_ch_T0000629:1;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23414211	23414331	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03209_ch_T0000629:2;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23414211	23414279	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03209_ch_T0000629:2;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23414277	23414279	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG03209_ch_T0000629;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23414332	23425172	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03209_ch_T0000629:2;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23425173	23425259	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03209_ch_T0000629:3;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23425260	23425360	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03209_ch_T0000629:3;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23425361	23425448	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=HG03209_ch_T0000629;gene_id=HG03209_ch_G0000220;Parent=HG03209_ch_T0000629;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03209_ch_T0000629:4;Name=PRY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23431135	23476944	.	-	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;gene_id=HG03209_ch_G0000221;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG03209_ch_G0000221;Name=LOC101929148
HG03209_chrY	CAT	transcript	23431135	23476944	1000	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_G0000221;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG03209_ch_T0000630;Name=LOC101929148
HG03209_chrY	CAT	exon	23431135	23431812	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23431813	23432327	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23432328	23432445	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23432446	23432989	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23432990	23433186	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23433187	23433306	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23433307	23433392	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23433393	23435192	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23435193	23435528	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23435529	23436994	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23436995	23437084	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23437085	23450721	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23450722	23451075	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23451076	23451505	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23451506	23451624	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23451625	23458802	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23458803	23458888	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23458889	23459196	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23459197	23459419	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23459420	23469411	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23469412	23469552	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23469553	23476099	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23476100	23476409	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23476410	23476743	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03209_ch_T0000630:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23476744	23476944	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=HG03209_ch_T0000630;gene_id=HG03209_ch_G0000221;Parent=HG03209_ch_T0000630;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03209_ch_T0000630:12;Name=LOC101929148;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23474425	23476291	.	+	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;gene_id=HG03209_ch_G0000222;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG03209_ch_G0000222;Name=TTTY6
HG03209_chrY	CAT	transcript	23474425	23476291	1000	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_G0000222;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG03209_ch_T0000631;Name=TTTY6
HG03209_chrY	CAT	exon	23474425	23474539	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_T0000631;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03209_ch_T0000631:0;Name=TTTY6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23474540	23474757	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_T0000631;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03209_ch_T0000631:0;Name=TTTY6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23474758	23474895	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_T0000631;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03209_ch_T0000631:1;Name=TTTY6;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23474896	23476052	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_T0000631;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03209_ch_T0000631:1;Name=TTTY6;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23476053	23476291	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=HG03209_ch_T0000631;gene_id=HG03209_ch_G0000222;Parent=HG03209_ch_T0000631;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03209_ch_T0000631:2;Name=TTTY6;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23491015	23512472	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1;gene_id=HG03209_ch_G0000223;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=augTM,transMap;ID=HG03209_ch_G0000223;Name=RBMY1J
HG03209_chrY	CAT	transcript	23491015	23512472	10000	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03209_ch_T0000632;Name=RBMY1J
HG03209_chrY	CAT	exon	23491015	23492518	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23492508	23492518	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23492508	23492510	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03209_ch_T0000632;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23492519	23495111	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23495112	23495258	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23495112	23495258	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23495259	23498991	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23498992	23499080	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498992	23499080	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499081	23499166	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23499167	23499277	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23499167	23499277	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499278	23500200	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500201	23500311	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500201	23500311	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500312	23500745	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500746	23500856	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500746	23500856	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500857	23501296	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23501297	23501407	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23501297	23501407	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23501408	23502362	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23502363	23502477	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23502363	23502477	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23502478	23504487	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23504488	23504640	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23504488	23504640	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23504641	23506555	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23506556	23506733	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23506556	23506733	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23506734	23509756	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23509757	23509860	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23509757	23509860	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23509861	23510324	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23510325	23510437	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23510325	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000632:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23510431	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03209_ch_T0000632;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23510438	23512298	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000632:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23512299	23512472	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000632;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000632;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000632:12;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23498004	23509848	10000	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03209_ch_T0000633;Name=RBMY1J
HG03209_chrY	CAT	exon	23498004	23498580	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498282	23498580	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23498282	23498284	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03209_ch_T0000633;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23498581	23498991	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23498992	23499080	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498992	23499080	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499081	23499166	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23499167	23499277	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23499167	23499277	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499278	23500200	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500201	23500311	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500201	23500311	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500312	23500745	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500746	23500856	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500746	23500856	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500857	23501296	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23501297	23501407	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23501297	23501407	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23501408	23502362	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23502363	23502477	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23502363	23502477	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23502478	23504487	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23504488	23504640	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23504488	23504611	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000633:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23504609	23504611	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03209_ch_T0000633;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23504641	23509756	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000633:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23509757	23509848	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000633;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000633;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000633:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23498004	23512472	10000	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03209_ch_T0000634;Name=RBMY1J
HG03209_chrY	CAT	exon	23498004	23498580	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498282	23498580	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23498282	23498284	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03209_ch_T0000634;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23498581	23498991	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23498992	23499080	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498992	23499080	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499081	23499166	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23499167	23499277	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23499167	23499277	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499278	23500200	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500201	23500311	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500201	23500311	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500312	23500745	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500746	23500856	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500746	23500856	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500857	23501296	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23501297	23501407	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23501297	23501407	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23501408	23502362	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23502363	23502477	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23502363	23502477	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23502478	23504487	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23504488	23504640	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23504488	23504640	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23504641	23506555	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23506556	23506733	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23506556	23506733	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23506734	23509756	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23509757	23509860	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23509757	23509860	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23509861	23510324	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23510325	23510437	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23510325	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000634:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23510431	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03209_ch_T0000634;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23510438	23512298	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000634:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23512299	23512472	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000634;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000634;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000634:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23498004	23512472	10000	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03209_ch_T0000635;Name=RBMY1J
HG03209_chrY	CAT	exon	23498004	23498580	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498282	23498580	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23498282	23498284	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03209_ch_T0000635;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23498581	23498991	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23498992	23499080	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23498992	23499080	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23499081	23500200	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500201	23500311	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500201	23500311	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500312	23500745	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23500746	23500856	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23500746	23500856	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23500857	23501296	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23501297	23501407	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23501297	23501407	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23501408	23502362	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23502363	23502477	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23502363	23502477	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23502478	23504487	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23504488	23504640	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23504488	23504640	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23504641	23506555	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23506556	23506733	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23506556	23506733	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23506734	23509756	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23509757	23509860	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23509757	23509860	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23509861	23510324	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23510325	23510437	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23510325	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03209_ch_T0000635:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23510431	23510433	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03209_ch_T0000635;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23510438	23512298	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03209_ch_T0000635:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23512299	23512472	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000635;gene_id=HG03209_ch_G0000223;Parent=HG03209_ch_T0000635;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03209_ch_T0000635:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23595496	23599202	.	-	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;gene_id=HG03209_ch_G0000224;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG03209_ch_G0000224;Name=LOC100652931
HG03209_chrY	CAT	transcript	23595496	23599202	1000	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_G0000224;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG03209_ch_T0000636;Name=LOC100652931
HG03209_chrY	CAT	exon	23595496	23595517	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_T0000636;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03209_ch_T0000636:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23595518	23596982	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_T0000636;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03209_ch_T0000636:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23596983	23597097	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_T0000636;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03209_ch_T0000636:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23597098	23599132	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_T0000636;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03209_ch_T0000636:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23599133	23599202	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=HG03209_ch_T0000636;gene_id=HG03209_ch_G0000224;Parent=HG03209_ch_T0000636;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03209_ch_T0000636:2;Name=LOC100652931;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23599675	23607021	.	-	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;gene_id=HG03209_ch_G0000225;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG03209_ch_G0000225;Name=RBMY2FP
HG03209_chrY	CAT	transcript	23599675	23607021	1000	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_G0000225;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG03209_ch_T0000637;Name=RBMY2FP
HG03209_chrY	CAT	exon	23599675	23601387	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03209_ch_T0000637:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23601388	23604381	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03209_ch_T0000637:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23604382	23604485	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03209_ch_T0000637:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23604486	23604907	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03209_ch_T0000637:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23604908	23605020	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03209_ch_T0000637:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23605021	23606909	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03209_ch_T0000637:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23606910	23607021	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=HG03209_ch_T0000637;gene_id=HG03209_ch_G0000225;Parent=HG03209_ch_T0000637;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03209_ch_T0000637:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23617019	23619097	.	+	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;gene_id=HG03209_ch_G0000226;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG03209_ch_G0000226;Name=TTTY5
HG03209_chrY	CAT	transcript	23617019	23619097	1000	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG03209_ch_T0000638;gene_id=HG03209_ch_G0000226;Parent=HG03209_ch_G0000226;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG03209_ch_T0000638;Name=TTTY5
HG03209_chrY	CAT	exon	23617019	23617589	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG03209_ch_T0000638;gene_id=HG03209_ch_G0000226;Parent=HG03209_ch_T0000638;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03209_ch_T0000638:0;Name=TTTY5;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23617590	23618106	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG03209_ch_T0000638;gene_id=HG03209_ch_G0000226;Parent=HG03209_ch_T0000638;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG03209_ch_T0000638:0;Name=TTTY5;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23618107	23619097	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=HG03209_ch_T0000638;gene_id=HG03209_ch_G0000226;Parent=HG03209_ch_T0000638;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03209_ch_T0000638:1;Name=TTTY5;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23732940	23752982	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1;gene_id=HG03209_ch_G0000227;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=augTM,transMap;ID=HG03209_ch_G0000227;Name=RBMY1F
HG03209_chrY	CAT	transcript	23732940	23747325	10000	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000639;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000639;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746051	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746052	23746162	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746052	23746162	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746163	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746332	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746332	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746333	23746748	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000639:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746749	23747325	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000639:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746749	23746821	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000639:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23746819	23746821	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000639;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000639;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000639;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23732940	23747325	10000	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000640;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000640;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746337	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746337	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746338	23746748	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000640:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746749	23747325	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000640:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746749	23747047	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000640:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23747045	23747047	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000640;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000640;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000640;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23732940	23747325	10000	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000641;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000641;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746051	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746052	23746162	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746052	23746162	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746163	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746337	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746337	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746338	23746748	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000641:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746749	23747325	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000641:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746749	23747047	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000641:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23747045	23747047	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000641;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000641;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000641;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23732940	23752982	10000	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000642;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000642;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746051	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746052	23746162	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746052	23746162	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746163	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746337	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746337	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746338	23750070	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23750071	23750217	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23750071	23750217	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23750218	23752810	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000642:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23752811	23752982	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000642:12;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23752811	23752821	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000642:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23752819	23752821	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000642;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000642;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000642;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23732940	23752982	10000	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000643;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000643;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746337	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746337	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746338	23750070	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23750071	23750217	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23750071	23750217	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23750218	23752810	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23752811	23752982	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000643:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23752811	23752821	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000643:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23752819	23752821	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000643;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000643;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000643;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	23732940	23752982	10000	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03209_ch_T0000644;Name=RBMY1F
HG03209_chrY	CAT	exon	23732940	23733028	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23733029	23734889	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23734890	23735002	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23734894	23735002	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23734894	23734896	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03209_ch_T0000644;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735003	23735468	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23735469	23735572	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23735469	23735572	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23735573	23738595	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23738596	23738773	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23738596	23738773	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23738774	23740688	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23740689	23740841	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23740689	23740841	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23740842	23742851	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23742852	23742966	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23742852	23742966	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23742967	23743921	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23743922	23744032	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23743922	23744032	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744033	23744472	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23744473	23744583	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23744473	23744583	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23744584	23745017	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23745018	23745128	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23745018	23745128	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23745129	23746248	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23746249	23746337	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23746249	23746337	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23746338	23752810	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03209_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23752811	23752982	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03209_ch_T0000644:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23752811	23752821	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03209_ch_T0000644:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23752819	23752821	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000644;gene_id=HG03209_ch_G0000227;Parent=HG03209_ch_T0000644;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03209_ch_T0000644;Name=RBMY1F;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23768329	23814185	.	+	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;gene_id=HG03209_ch_G0000228;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG03209_ch_G0000228;Name=LOC102725532
HG03209_chrY	CAT	transcript	23768329	23814185	1000	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_G0000228;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG03209_ch_T0000645;Name=LOC102725532
HG03209_chrY	CAT	exon	23768329	23768585	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23768586	23768919	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23768920	23769229	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23769230	23775771	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23775772	23775912	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23775913	23785900	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23785901	23786123	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23786124	23786431	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23786432	23786517	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23786518	23793695	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23793696	23793814	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23793815	23794244	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23794245	23794598	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23794599	23808235	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23808236	23808325	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23808326	23809791	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23809792	23810127	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23810128	23811927	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23811928	23812013	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23812014	23812133	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23812134	23812330	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23812331	23812874	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23812875	23812992	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23812993	23813507	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03209_ch_T0000645:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23813508	23814185	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=HG03209_ch_T0000645;gene_id=HG03209_ch_G0000228;Parent=HG03209_ch_T0000645;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03209_ch_T0000645:12;Name=LOC102725532;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23769035	23770882	.	-	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;gene_id=HG03209_ch_G0000229;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG03209_ch_G0000229;Name=TTTY6B
HG03209_chrY	CAT	transcript	23769035	23770882	1000	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_G0000229;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG03209_ch_T0000646;Name=TTTY6B
HG03209_chrY	CAT	exon	23769035	23769276	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_T0000646;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03209_ch_T0000646:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23769277	23770433	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_T0000646;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03209_ch_T0000646:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23770434	23770571	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_T0000646;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03209_ch_T0000646:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23770572	23770789	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_T0000646;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03209_ch_T0000646:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23770790	23770882	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=HG03209_ch_T0000646;gene_id=HG03209_ch_G0000229;Parent=HG03209_ch_T0000646;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03209_ch_T0000646:2;Name=TTTY6B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23819871	23844111	.	+	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;gene_id=HG03209_ch_G0000230;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff;ID=HG03209_ch_G0000230;Name=PRY
HG03209_chrY	CAT	transcript	23819871	23844111	100	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_G0000230;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG03209_ch_T0000647;Name=PRY
HG03209_chrY	CAT	exon	23819871	23819958	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03209_ch_T0000647:0;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23819959	23820059	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03209_ch_T0000647:0;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23820060	23820146	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03209_ch_T0000647:1;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23820147	23830988	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03209_ch_T0000647:1;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23830989	23831109	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03209_ch_T0000647:2;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23831041	23831109	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03209_ch_T0000647:0;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	23831041	23831043	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG03209_ch_T0000647;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23831110	23833684	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03209_ch_T0000647:2;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23833685	23833800	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03209_ch_T0000647:3;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23833685	23833800	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03209_ch_T0000647:1;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23833801	23843285	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03209_ch_T0000647:3;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23843286	23844111	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03209_ch_T0000647:4;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	23843286	23843544	.	+	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03209_ch_T0000647:2;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	23843542	23843544	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=HG03209_ch_T0000647;gene_id=HG03209_ch_G0000230;Parent=HG03209_ch_T0000647;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG03209_ch_T0000647;Name=PRY;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	23885520	23887517	.	-	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;gene_id=HG03209_ch_G0000231;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG03209_ch_G0000231;Name=LOC107987357
HG03209_chrY	CAT	transcript	23885520	23887517	1000	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_G0000231;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG03209_ch_T0000648;Name=LOC107987357
HG03209_chrY	CAT	exon	23885520	23885721	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_T0000648;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03209_ch_T0000648:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23885722	23887256	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_T0000648;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03209_ch_T0000648:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23887257	23887317	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_T0000648;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03209_ch_T0000648:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	23887318	23887434	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_T0000648;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03209_ch_T0000648:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	23887435	23887517	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03209_ch_T0000648;gene_id=HG03209_ch_G0000231;Parent=HG03209_ch_T0000648;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03209_ch_T0000648:2;Name=LOC107987357;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24115699	24126937	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG03209_ch_G0000232;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG03209_ch_G0000232;Name=LOC107987348
HG03209_chrY	CAT	transcript	24115699	24126937	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_G0000232;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03209_ch_T0000649;Name=LOC107987348
HG03209_chrY	CAT	exon	24115699	24116154	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000649;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000649:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24116155	24122124	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000649;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03209_ch_T0000649:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24122125	24124289	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000649;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000649:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24124290	24124930	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000649;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03209_ch_T0000649:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24124931	24126937	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03209_ch_T0000649;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000649;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000649:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	24115699	24126937	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_G0000232;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03209_ch_T0000650;Name=LOC107987348
HG03209_chrY	CAT	exon	24115699	24116154	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000650;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000650:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24116155	24121656	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000650;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03209_ch_T0000650:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24121657	24124289	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000650;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000650:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24124290	24124930	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000650;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03209_ch_T0000650:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24124931	24126937	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03209_ch_T0000650;gene_id=HG03209_ch_G0000232;Parent=HG03209_ch_T0000650;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03209_ch_T0000650:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24181070	24182201	.	+	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;gene_id=HG03209_ch_G0000233;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG03209_ch_G0000233;Name=TTTY17C
HG03209_chrY	CAT	transcript	24181070	24182201	1000	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03209_ch_T0000651;gene_id=HG03209_ch_G0000233;Parent=HG03209_ch_G0000233;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG03209_ch_T0000651;Name=TTTY17C
HG03209_chrY	CAT	exon	24181070	24181129	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03209_ch_T0000651;gene_id=HG03209_ch_G0000233;Parent=HG03209_ch_T0000651;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03209_ch_T0000651:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24181130	24182095	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03209_ch_T0000651;gene_id=HG03209_ch_G0000233;Parent=HG03209_ch_T0000651;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG03209_ch_T0000651:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24182096	24182201	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=HG03209_ch_T0000651;gene_id=HG03209_ch_G0000233;Parent=HG03209_ch_T0000651;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03209_ch_T0000651:1;Name=TTTY17C;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24265942	24302774	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=HG03209_ch_G0000234;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG03209_ch_G0000234;Name=TTTY4C
HG03209_chrY	CAT	transcript	24265942	24302774	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_G0000234;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG03209_ch_T0000652;Name=TTTY4C
HG03209_chrY	CAT	exon	24265942	24266102	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03209_ch_T0000652:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24266103	24293117	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03209_ch_T0000652:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24293118	24293193	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03209_ch_T0000652:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24293194	24294997	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03209_ch_T0000652:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24294998	24295105	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03209_ch_T0000652:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24295106	24301773	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03209_ch_T0000652:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24301774	24302774	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03209_ch_T0000652;gene_id=HG03209_ch_G0000234;Parent=HG03209_ch_T0000652;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03209_ch_T0000652:3;Name=TTTY4C;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24313753	24334956	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=HG03209_ch_G0000235;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG03209_ch_G0000235;Name=BPY2B
HG03209_chrY	CAT	transcript	24313753	24334956	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_G0000235;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG03209_ch_T0000653;Name=BPY2B
HG03209_chrY	CAT	exon	24313753	24313783	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:0;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24313784	24314058	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:0;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24314059	24314181	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:1;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24314182	24317246	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:1;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24317247	24317383	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:2;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24317384	24321792	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:2;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24321793	24321911	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:3;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24321834	24321911	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03209_ch_T0000653:0;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	24321834	24321836	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG03209_ch_T0000653;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24321912	24323970	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:3;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24323971	24324088	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:4;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24323971	24324088	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03209_ch_T0000653:1;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24324089	24326942	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:4;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24326943	24327048	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:5;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24326943	24327048	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03209_ch_T0000653:2;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24327049	24327740	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:5;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24327741	24327865	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:6;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24327741	24327759	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03209_ch_T0000653:3;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	24327757	24327759	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG03209_ch_T0000653;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24327866	24334415	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:6;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24334416	24334540	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:7;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24334541	24334634	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03209_ch_T0000653:7;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24334635	24334956	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03209_ch_T0000653;gene_id=HG03209_ch_G0000235;Parent=HG03209_ch_T0000653;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03209_ch_T0000653:8;Name=BPY2B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24435862	24439199	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=HG03209_ch_G0000236;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG03209_ch_G0000236;Name=LOC105377242
HG03209_chrY	CAT	transcript	24435862	24439199	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_G0000236;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03209_ch_T0000654;Name=LOC105377242
HG03209_chrY	CAT	exon	24435862	24435962	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000654;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000654:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24435963	24438320	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000654;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03209_ch_T0000654:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24438321	24438358	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000654;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000654:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24438359	24439020	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000654;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03209_ch_T0000654:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24439021	24439199	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000654;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000654;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000654:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	24435862	24439199	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_G0000236;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03209_ch_T0000655;Name=LOC105377242
HG03209_chrY	CAT	exon	24435862	24435962	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000655;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000655:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24435963	24438293	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000655;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03209_ch_T0000655:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24438294	24438358	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000655;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000655:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24438359	24439020	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000655;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03209_ch_T0000655:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24439021	24439199	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03209_ch_T0000655;gene_id=HG03209_ch_G0000236;Parent=HG03209_ch_T0000655;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03209_ch_T0000655:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24458822	24528479	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=HG03209_ch_G0000237;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG03209_ch_G0000237;Name=DAZ3
HG03209_chrY	CAT	transcript	24458822	24528479	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_G0000237;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03209_ch_T0000656;Name=DAZ3
HG03209_chrY	CAT	exon	24458822	24460678	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24460679	24464641	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24464642	24464740	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24464677	24464740	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	24464677	24464679	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03209_ch_T0000656;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24464741	24469313	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24469314	24469348	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24469314	24469348	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24469349	24470092	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24470093	24470164	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24470093	24470164	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24470165	24482263	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24482264	24482335	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24482264	24482335	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24482336	24484640	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24484641	24484712	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24484641	24484712	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24484713	24487036	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24487037	24487108	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24487037	24487108	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24487109	24489419	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24489420	24489491	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24489420	24489491	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24489492	24491815	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24491816	24491887	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24491816	24491887	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24491888	24494206	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24494207	24494278	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24494207	24494278	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24494279	24496651	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24496652	24496723	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:10;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24496652	24496723	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24496724	24508968	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:10;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24508969	24509108	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:11;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24508969	24509108	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:10;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24509109	24509197	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:11;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24509198	24509261	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:12;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24509198	24509261	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:11;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24509262	24509697	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:12;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24509698	24509749	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:13;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24509698	24509749	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:12;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24509750	24510309	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:13;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24510310	24510401	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:14;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24510310	24510401	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:13;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24510402	24510675	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:14;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24510676	24510822	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:15;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24510676	24510822	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:14;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24510823	24528268	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000656:15;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24528269	24528479	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000656:16;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24528269	24528271	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000656:15;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	24528269	24528271	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000656;gene_id=HG03209_ch_G0000237;Parent=HG03209_ch_T0000656;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03209_ch_T0000656;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24548906	24616055	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG03209_ch_G0000238;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=augTM,transMap;ID=HG03209_ch_G0000238;Name=DAZ4
HG03209_chrY	CAT	transcript	24548906	24616055	9950	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000657;Name=DAZ4
HG03209_chrY	CAT	exon	24548906	24549215	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000657;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24549216	24555815	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24555816	24555962	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24555816	24555962	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24555963	24556236	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24556237	24556328	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24556237	24556328	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24556329	24556888	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24556889	24556940	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24556889	24556940	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24556941	24557376	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24557377	24557440	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24557377	24557440	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24557441	24557529	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24557530	24557669	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24557530	24557669	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24557670	24559069	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24559070	24559141	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24559070	24559141	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24559142	24561513	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24561514	24561585	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24561514	24561585	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24561586	24563904	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24563905	24563976	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24563905	24563976	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24563977	24592791	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24592792	24592863	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24592792	24592863	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24592864	24604713	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24604714	24604785	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24604714	24604785	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24604786	24605529	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24605530	24605564	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24605530	24605564	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24605565	24610137	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24610138	24610236	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24610138	24610201	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000657:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	24610199	24610201	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000657;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24610237	24614198	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000657:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24614199	24616055	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000657;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000657;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000657:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	24548906	24616055	9940	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000658;Name=DAZ4
HG03209_chrY	CAT	exon	24548906	24549215	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000658;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24549216	24559069	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24559070	24559141	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24559070	24559141	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24559142	24561513	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24561514	24561585	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24561514	24561585	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24561586	24563904	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24563905	24563976	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24563905	24563976	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24563977	24604713	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24604714	24604785	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24604714	24604785	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24604786	24605529	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24605530	24605564	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24605530	24605564	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24605565	24610137	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24610138	24610236	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24610138	24610201	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000658:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	24610199	24610201	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000658;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24610237	24614198	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000658:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24614199	24616055	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000658;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000658;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000658:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	24549005	24616055	9950	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000659;Name=DAZ4
HG03209_chrY	CAT	exon	24549005	24549215	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	24549213	24549215	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000659;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24549216	24555815	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24555816	24555962	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24555816	24555962	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24555963	24556236	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24556237	24556328	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24556237	24556328	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24556329	24556888	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24556889	24556940	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24556889	24556940	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24556941	24557376	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24557377	24557440	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24557377	24557440	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24557441	24557529	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24557530	24557669	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24557530	24557669	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24557670	24559069	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24559070	24559141	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24559070	24559141	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24559142	24561513	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24561514	24561585	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24561514	24561585	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24561586	24563904	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24563905	24563976	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24563905	24563976	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24563977	24592791	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24592792	24592863	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24592792	24592863	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24592864	24595176	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24595177	24595248	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24595177	24595248	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24595249	24597561	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24597562	24597633	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24597562	24597633	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24597634	24599945	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24599946	24600017	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24599946	24600017	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24600018	24602329	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24602330	24602401	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24602330	24602401	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24602402	24604713	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24604714	24604785	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24604714	24604785	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24604786	24605529	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24605530	24605564	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24605530	24605564	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24605565	24610137	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24610138	24610236	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	24610138	24610201	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000659:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	24610199	24610201	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000659;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24610237	24614198	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000659:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24614199	24616055	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000659;gene_id=HG03209_ch_G0000238;Parent=HG03209_ch_T0000659;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000659:17;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24635676	24639013	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;alternative_source_transcripts=hg002_chrY_paternal_528.1;gene_id=HG03209_ch_G0000239;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG03209_ch_G0000239;Name=LOC105377239
HG03209_chrY	CAT	transcript	24635676	24639013	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_G0000239;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03209_ch_T0000660;Name=LOC105377239
HG03209_chrY	CAT	exon	24635676	24635854	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000660;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000660:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24635855	24636516	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000660;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03209_ch_T0000660:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24636517	24636581	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000660;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000660:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24636582	24638912	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000660;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03209_ch_T0000660:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24638913	24639013	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03209_ch_T0000660;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000660;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000660:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	24635676	24639013	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_G0000239;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03209_ch_T0000661;Name=LOC105377239
HG03209_chrY	CAT	exon	24635676	24635854	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000661;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000661:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24635855	24636516	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000661;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03209_ch_T0000661:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24636517	24636554	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000661;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000661:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24636555	24638912	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000661;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03209_ch_T0000661:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24638913	24639013	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03209_ch_T0000661;gene_id=HG03209_ch_G0000239;Parent=HG03209_ch_T0000661;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03209_ch_T0000661:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24747782	24747919	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=HG03209_ch_G0000240;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG03209_ch_G0000240;Name=LOC124900506
HG03209_chrY	CAT	transcript	24747782	24747919	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03209_ch_T0000662;gene_id=HG03209_ch_G0000240;Parent=HG03209_ch_G0000240;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG03209_ch_T0000662;Name=LOC124900506
HG03209_chrY	CAT	exon	24747782	24747919	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03209_ch_T0000662;gene_id=HG03209_ch_G0000240;Parent=HG03209_ch_T0000662;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG03209_ch_T0000662:0;Name=LOC124900506;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24759920	24801419	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=HG03209_ch_G0000241;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG03209_ch_G0000241;Name=REREP1Y
HG03209_chrY	CAT	transcript	24759920	24801419	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_G0000241;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG03209_ch_T0000663;Name=REREP1Y
HG03209_chrY	CAT	exon	24759920	24760322	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_T0000663;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03209_ch_T0000663:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24760323	24787140	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_T0000663;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03209_ch_T0000663:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24787141	24787213	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_T0000663;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03209_ch_T0000663:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24787214	24796829	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_T0000663;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03209_ch_T0000663:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24796830	24801419	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03209_ch_T0000663;gene_id=HG03209_ch_G0000241;Parent=HG03209_ch_T0000663;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03209_ch_T0000663:2;Name=REREP1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	24962325	24965449	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=HG03209_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG03209_ch_G0000242;Name=LOC107987349
HG03209_chrY	CAT	transcript	24962325	24965449	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_G0000242;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG03209_ch_T0000664;Name=LOC107987349
HG03209_chrY	CAT	exon	24962325	24962407	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_T0000664;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03209_ch_T0000664:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24962408	24962524	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_T0000664;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03209_ch_T0000664:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24962525	24962585	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_T0000664;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03209_ch_T0000664:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	24962586	24964120	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_T0000664;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03209_ch_T0000664:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	24964121	24965449	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03209_ch_T0000664;gene_id=HG03209_ch_G0000242;Parent=HG03209_ch_T0000664;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03209_ch_T0000664:2;Name=LOC107987349;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25261369	25266264	.	-	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=HG03209_ch_G0000243;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG03209_ch_G0000243;Name=TTTY3B
HG03209_chrY	CAT	transcript	25261369	25266264	1000	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_G0000243;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG03209_ch_T0000665;Name=TTTY3B
HG03209_chrY	CAT	exon	25261369	25261473	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_T0000665;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03209_ch_T0000665:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25261474	25263827	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_T0000665;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03209_ch_T0000665:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25263828	25263962	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_T0000665;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03209_ch_T0000665:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25263963	25266160	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_T0000665;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03209_ch_T0000665:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25266161	25266264	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03209_ch_T0000665;gene_id=HG03209_ch_G0000243;Parent=HG03209_ch_T0000665;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03209_ch_T0000665:2;Name=TTTY3B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25369222	25372618	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=HG03209_ch_G0000244;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG03209_ch_G0000244;Name=CDY1
HG03209_chrY	CAT	transcript	25369222	25372616	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_G0000244;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=HG03209_ch_T0000666;Name=CDY1
HG03209_chrY	CAT	exon	25369222	25369303	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000666;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03209_ch_T0000666:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25369304	25370078	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000666;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03209_ch_T0000666:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25370079	25370278	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000666;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03209_ch_T0000666:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25370279	25370698	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000666;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03209_ch_T0000666:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25370699	25372616	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03209_ch_T0000666;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000666;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03209_ch_T0000666:2;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	25369831	25372616	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03209_ch_T0000667;Name=CDY1
HG03209_chrY	CAT	exon	25369831	25370278	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03209_ch_T0000667:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25370206	25370278	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03209_ch_T0000667:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	25370206	25370208	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03209_ch_T0000667;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25370279	25370698	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03209_ch_T0000667:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25370699	25372616	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03209_ch_T0000667:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25370699	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03209_ch_T0000667:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	25372288	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03209_ch_T0000667;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000667;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03209_ch_T0000667;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	25369831	25372618	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03209_ch_T0000668;Name=CDY1
HG03209_chrY	CAT	exon	25369831	25370278	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03209_ch_T0000668:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25370258	25370278	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03209_ch_T0000668:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	25370258	25370260	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03209_ch_T0000668;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25370279	25370898	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03209_ch_T0000668:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25370899	25372618	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03209_ch_T0000668:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25370899	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03209_ch_T0000668:1;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	25372288	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000668;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000668;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03209_ch_T0000668;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	25370395	25372616	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000669;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03209_ch_T0000669;Name=CDY1
HG03209_chrY	CAT	exon	25370395	25372616	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000669;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000669;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03209_ch_T0000669:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25370668	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000669;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000669;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03209_ch_T0000669:0;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	25370668	25370670	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000669;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000669;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03209_ch_T0000669;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	25372288	25372290	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03209_ch_T0000669;gene_id=HG03209_ch_G0000244;Parent=HG03209_ch_T0000669;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03209_ch_T0000669;Name=CDY1;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25508032	25511829	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03209_ch_G0000245;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=HG03209_ch_G0000245;Name=CSPG4P1Y
HG03209_chrY	CAT	transcript	25508032	25511829	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000670;gene_id=HG03209_ch_G0000245;Parent=HG03209_ch_G0000245;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03209_ch_T0000670;Name=CSPG4P1Y
HG03209_chrY	CAT	exon	25508032	25508103	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000670;gene_id=HG03209_ch_G0000245;Parent=HG03209_ch_T0000670;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03209_ch_T0000670:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25508104	25511106	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000670;gene_id=HG03209_ch_G0000245;Parent=HG03209_ch_T0000670;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03209_ch_T0000670:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25511107	25511829	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000670;gene_id=HG03209_ch_G0000245;Parent=HG03209_ch_T0000670;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03209_ch_T0000670:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25531022	25532552	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=HG03209_ch_G0000246;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03209_ch_G0000246;Name=LOC102724034
HG03209_chrY	CAT	transcript	25531022	25532552	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_G0000246;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG03209_ch_T0000671;Name=LOC102724034
HG03209_chrY	CAT	exon	25531022	25531047	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_T0000671;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000671:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25531048	25531735	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_T0000671;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03209_ch_T0000671:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25531736	25531860	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_T0000671;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000671:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25531861	25532128	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_T0000671;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03209_ch_T0000671:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25532129	25532552	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03209_ch_T0000671;gene_id=HG03209_ch_G0000246;Parent=HG03209_ch_T0000671;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000671:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25534551	25539414	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=HG03209_ch_G0000247;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG03209_ch_G0000247;Name=GOLGA2P3Y
HG03209_chrY	CAT	transcript	25534551	25539414	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_G0000247;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG03209_ch_T0000672;Name=GOLGA2P3Y
HG03209_chrY	CAT	exon	25534551	25534634	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25534635	25534716	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25534717	25534809	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25534810	25534898	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25534899	25535087	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25535088	25535342	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25535343	25535431	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25535432	25535851	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25535852	25535926	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25535927	25537282	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25537283	25537340	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25537341	25537636	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25537637	25537988	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25537989	25539106	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25539107	25539185	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25539186	25539371	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03209_ch_T0000672:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25539372	25539414	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03209_ch_T0000672;gene_id=HG03209_ch_G0000247;Parent=HG03209_ch_T0000672;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03209_ch_T0000672:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25635284	25646272	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=HG03209_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03209_ch_G0000248;Name=LOC107987240
HG03209_chrY	CAT	transcript	25635284	25646272	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_G0000248;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG03209_ch_T0000673;Name=LOC107987240
HG03209_chrY	CAT	exon	25635284	25635941	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_T0000673;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000673:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25635942	25636150	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_T0000673;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03209_ch_T0000673:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25636151	25636257	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_T0000673;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000673:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25636258	25646040	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_T0000673;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03209_ch_T0000673:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25646041	25646272	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03209_ch_T0000673;gene_id=HG03209_ch_G0000248;Parent=HG03209_ch_T0000673;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000673:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25654153	25655786	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=HG03209_ch_G0000249;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03209_ch_G0000249;Name=LOC101928626
HG03209_chrY	CAT	transcript	25654153	25655786	1000	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_G0000249;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG03209_ch_T0000674;Name=LOC101928626
HG03209_chrY	CAT	exon	25654153	25654243	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000674:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25654244	25654938	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03209_ch_T0000674:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25654939	25655205	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000674:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25655206	25655342	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03209_ch_T0000674:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25655343	25655786	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03209_ch_T0000674;gene_id=HG03209_ch_G0000249;Parent=HG03209_ch_T0000674;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000674:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25744541	25757646	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.2;gene_id=HG03209_ch_G0000250;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03209_ch_G0000250;Name=LOC107987350
HG03209_chrY	CAT	transcript	25744541	25757646	1000	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_G0000250;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03209_ch_T0000675;Name=LOC107987350
HG03209_chrY	CAT	exon	25744541	25744996	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000675;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000675:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25744997	25750498	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000675;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000675:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25750499	25753131	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000675;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000675:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25753132	25753772	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000675;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000675:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25753773	25757646	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03209_ch_T0000675;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000675;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000675:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	25744541	25757646	1000	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_G0000250;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03209_ch_T0000676;Name=LOC107987350
HG03209_chrY	CAT	exon	25744541	25744996	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000676;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000676:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25744997	25750966	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000676;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000676:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25750967	25753131	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000676;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000676:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25753132	25753772	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000676;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000676:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25753773	25757646	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03209_ch_T0000676;gene_id=HG03209_ch_G0000250;Parent=HG03209_ch_T0000676;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000676:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25809915	25811045	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=HG03209_ch_G0000251;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG03209_ch_G0000251;Name=TTTY17A
HG03209_chrY	CAT	transcript	25809915	25811045	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03209_ch_T0000677;gene_id=HG03209_ch_G0000251;Parent=HG03209_ch_G0000251;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG03209_ch_T0000677;Name=TTTY17A
HG03209_chrY	CAT	exon	25809915	25809974	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03209_ch_T0000677;gene_id=HG03209_ch_G0000251;Parent=HG03209_ch_T0000677;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03209_ch_T0000677:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25809975	25810939	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03209_ch_T0000677;gene_id=HG03209_ch_G0000251;Parent=HG03209_ch_T0000677;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG03209_ch_T0000677:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25810940	25811045	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03209_ch_T0000677;gene_id=HG03209_ch_G0000251;Parent=HG03209_ch_T0000677;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03209_ch_T0000677:1;Name=TTTY17A;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25894798	25931617	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=HG03209_ch_G0000252;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG03209_ch_G0000252;Name=TTTY4B
HG03209_chrY	CAT	transcript	25894798	25931617	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_G0000252;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG03209_ch_T0000678;Name=TTTY4B
HG03209_chrY	CAT	exon	25894798	25894958	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03209_ch_T0000678:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25894959	25921978	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03209_ch_T0000678:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25921979	25922054	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03209_ch_T0000678:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25922055	25923858	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03209_ch_T0000678:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25923859	25923966	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03209_ch_T0000678:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25923967	25930616	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03209_ch_T0000678:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25930617	25931617	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03209_ch_T0000678;gene_id=HG03209_ch_G0000252;Parent=HG03209_ch_T0000678;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03209_ch_T0000678:3;Name=TTTY4B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	25942596	25963798	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=HG03209_ch_G0000253;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG03209_ch_G0000253;Name=BPY2
HG03209_chrY	CAT	transcript	25942596	25963798	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_G0000253;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG03209_ch_T0000679;Name=BPY2
HG03209_chrY	CAT	exon	25942596	25942626	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:0;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25942627	25942901	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:0;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25942902	25943024	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:1;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25943025	25946089	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:1;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25946090	25946226	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:2;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25946227	25950635	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:2;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25950636	25950754	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:3;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25950677	25950754	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03209_ch_T0000679:0;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	25950677	25950679	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG03209_ch_T0000679;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25950755	25952813	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:3;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25952814	25952931	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:4;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25952814	25952931	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03209_ch_T0000679:1;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25952932	25955784	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:4;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25955785	25955890	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:5;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25955785	25955890	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03209_ch_T0000679:2;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25955891	25956582	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:5;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25956583	25956707	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:6;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	25956583	25956601	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03209_ch_T0000679:3;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	25956599	25956601	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG03209_ch_T0000679;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25956708	25963257	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:6;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25963258	25963382	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:7;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	25963383	25963476	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03209_ch_T0000679:7;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	25963477	25963798	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03209_ch_T0000679;gene_id=HG03209_ch_G0000253;Parent=HG03209_ch_T0000679;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03209_ch_T0000679:8;Name=BPY2;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26064607	26067948	.	-	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=HG03209_ch_G0000254;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG03209_ch_G0000254;Name=LOC105377241
HG03209_chrY	CAT	transcript	26064607	26067948	1000	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_G0000254;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03209_ch_T0000680;Name=LOC105377241
HG03209_chrY	CAT	exon	26064607	26064707	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000680;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000680:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26064708	26067038	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000680;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03209_ch_T0000680:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26067039	26067103	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000680;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000680:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26067104	26067765	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000680;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03209_ch_T0000680:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26067766	26067948	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000680;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000680;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000680:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26064607	26067948	1000	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_G0000254;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03209_ch_T0000681;Name=LOC105377241
HG03209_chrY	CAT	exon	26064607	26064707	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000681;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000681:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26064708	26067065	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000681;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03209_ch_T0000681:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26067066	26067103	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000681;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000681:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26067104	26067765	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000681;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03209_ch_T0000681:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26067766	26067948	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03209_ch_T0000681;gene_id=HG03209_ch_G0000254;Parent=HG03209_ch_T0000681;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03209_ch_T0000681:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26087553	26130740	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG03209_ch_G0000255;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG03209_ch_G0000255;Name=DAZ3
HG03209_chrY	CAT	transcript	26087553	26130740	100	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_G0000255;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03209_ch_T0000682;Name=DAZ3
HG03209_chrY	CAT	exon	26087553	26089409	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26089410	26093382	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26093383	26093481	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26093418	26093481	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:0;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26093418	26093420	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03209_ch_T0000682;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26093482	26098053	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26098054	26098088	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26098054	26098088	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:1;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26098089	26098833	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26098834	26098905	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26098834	26098905	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:2;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26098906	26108620	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26108621	26108692	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26108621	26108692	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:3;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26108693	26110997	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26110998	26111069	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26110998	26111069	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:4;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26111070	26113374	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26113375	26113446	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26113375	26113446	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:5;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26113447	26115770	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26115771	26115842	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26115771	26115842	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:6;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26115843	26118160	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26118161	26118232	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26118161	26118232	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:7;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26118233	26120603	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26120604	26120675	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26120604	26120675	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:8;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26120676	26130529	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03209_ch_T0000682:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26130530	26130740	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03209_ch_T0000682:10;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26130530	26130532	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03209_ch_T0000682:9;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26130530	26130532	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03209_ch_T0000682;gene_id=HG03209_ch_G0000255;Parent=HG03209_ch_T0000682;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03209_ch_T0000682;Name=DAZ3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26151167	26214849	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG03209_ch_G0000256;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG03209_ch_G0000256;Name=DAZ4
HG03209_chrY	CAT	transcript	26151167	26214849	100	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000683;Name=DAZ4
HG03209_chrY	CAT	exon	26151167	26151476	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000683;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26151477	26172180	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26172181	26172252	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26172181	26172252	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26172253	26174622	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26174623	26174694	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26174623	26174694	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26174695	26177011	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26177012	26177083	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26177012	26177083	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26177084	26179407	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26179408	26179479	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26179408	26179479	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26179480	26203495	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26203496	26203567	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26203496	26203567	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26203568	26204312	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26204313	26204347	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26204313	26204347	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26204348	26208919	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26208920	26209018	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26208920	26208983	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000683:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26208981	26208983	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000683;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26209019	26212992	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000683:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26212993	26214849	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000683;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000683;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000683:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26151167	26214849	100	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000684;Name=DAZ4
HG03209_chrY	CAT	exon	26151167	26151476	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000684;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26151477	26168926	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26168927	26169073	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26168927	26169073	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26169074	26169347	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26169348	26169439	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26169348	26169439	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26169440	26169999	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170000	26170051	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170000	26170051	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170052	26170487	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170488	26170551	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170488	26170551	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170552	26170640	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170641	26170780	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170641	26170780	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170781	26172180	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26172181	26172252	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26172181	26172252	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26172253	26174622	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26174623	26174694	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26174623	26174694	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26174695	26177011	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26177012	26177083	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26177012	26177083	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26177084	26179407	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26179408	26179479	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26179408	26179479	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26179480	26193958	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26193959	26194030	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26193959	26194030	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26194031	26203495	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26203496	26203567	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26203496	26203567	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26203568	26204312	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26204313	26204347	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26204313	26204347	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26204348	26208919	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26208920	26209018	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26208920	26208983	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000684:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26208981	26208983	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000684;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26209019	26212992	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000684:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26212993	26214849	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000684;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000684;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000684:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26151266	26214849	100	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03209_ch_T0000685;Name=DAZ4
HG03209_chrY	CAT	exon	26151266	26151476	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26151474	26151476	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03209_ch_T0000685;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26151477	26168926	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:0;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26168927	26169073	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26168927	26169073	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26169074	26169347	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:1;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26169348	26169439	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26169348	26169439	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26169440	26169999	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:2;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170000	26170051	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170000	26170051	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170052	26170487	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:3;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170488	26170551	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170488	26170551	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170552	26170640	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:4;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26170641	26170780	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26170641	26170780	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26170781	26172180	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:5;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26172181	26172252	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26172181	26172252	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26172253	26174622	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:6;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26174623	26174694	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26174623	26174694	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26174695	26177011	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:7;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26177012	26177083	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26177012	26177083	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26177084	26179407	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:8;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26179408	26179479	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26179408	26179479	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26179480	26193958	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:9;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26193959	26194030	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26193959	26194030	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26194031	26196343	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:10;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26196344	26196415	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26196344	26196415	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26196416	26198727	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:11;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26198728	26198799	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26198728	26198799	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26198800	26201111	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:12;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26201112	26201183	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26201112	26201183	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26201184	26203495	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:13;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26203496	26203567	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26203496	26203567	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26203568	26204312	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:14;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26204313	26204347	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26204313	26204347	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26204348	26208919	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:15;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26208920	26209018	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26208920	26208983	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03209_ch_T0000685:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26208981	26208983	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03209_ch_T0000685;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26209019	26212992	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03209_ch_T0000685:16;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26212993	26214849	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03209_ch_T0000685;gene_id=HG03209_ch_G0000256;Parent=HG03209_ch_T0000685;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03209_ch_T0000685:17;Name=DAZ4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26234458	26237799	.	+	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=HG03209_ch_G0000257;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG03209_ch_G0000257;Name=LOC105377238
HG03209_chrY	CAT	transcript	26234458	26237799	1000	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_G0000257;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03209_ch_T0000686;Name=LOC105377238
HG03209_chrY	CAT	exon	26234458	26234640	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000686;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000686:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26234641	26235302	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000686;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03209_ch_T0000686:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26235303	26235367	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000686;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000686:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26235368	26237698	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000686;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03209_ch_T0000686:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26237699	26237799	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000686;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000686;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000686:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26234458	26237799	1000	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_G0000257;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03209_ch_T0000687;Name=LOC105377238
HG03209_chrY	CAT	exon	26234458	26234640	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000687;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000687:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26234641	26235302	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000687;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03209_ch_T0000687:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26235303	26235340	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000687;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000687:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26235341	26237698	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000687;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03209_ch_T0000687:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26237699	26237799	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03209_ch_T0000687;gene_id=HG03209_ch_G0000257;Parent=HG03209_ch_T0000687;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03209_ch_T0000687:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26338678	26359880	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;gene_id=HG03209_ch_G0000258;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG03209_ch_G0000258;Name=BPY2C
HG03209_chrY	CAT	transcript	26338678	26359880	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_G0000258;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG03209_ch_T0000688;Name=BPY2C
HG03209_chrY	CAT	exon	26338678	26338999	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:0;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26339000	26339093	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:0;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26339094	26339218	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:1;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26339219	26345768	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:1;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26345769	26345893	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:2;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26345875	26345893	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03209_ch_T0000688:0;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26345875	26345877	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG03209_ch_T0000688;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26345894	26346585	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:2;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26346586	26346691	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:3;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26346586	26346691	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03209_ch_T0000688:1;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26346692	26349544	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:3;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26349545	26349662	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:4;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26349545	26349662	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03209_ch_T0000688:2;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26349663	26351721	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:4;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26351722	26351840	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:5;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26351722	26351799	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03209_ch_T0000688:3;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26351797	26351799	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG03209_ch_T0000688;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26351841	26356249	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:5;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26356250	26356386	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:6;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26356387	26359451	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:6;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26359452	26359574	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:7;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26359575	26359849	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03209_ch_T0000688:7;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26359850	26359880	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03209_ch_T0000688;gene_id=HG03209_ch_G0000258;Parent=HG03209_ch_T0000688;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03209_ch_T0000688:8;Name=BPY2C;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26370859	26407673	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=HG03209_ch_G0000259;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG03209_ch_G0000259;Name=TTTY4
HG03209_chrY	CAT	transcript	26370859	26407673	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_G0000259;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG03209_ch_T0000689;Name=TTTY4
HG03209_chrY	CAT	exon	26370859	26371859	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03209_ch_T0000689:0;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26371860	26378527	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03209_ch_T0000689:0;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26378528	26378635	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03209_ch_T0000689:1;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26378636	26380439	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03209_ch_T0000689:1;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26380440	26380515	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03209_ch_T0000689:2;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26380516	26407512	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03209_ch_T0000689:2;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26407513	26407673	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03209_ch_T0000689;gene_id=HG03209_ch_G0000259;Parent=HG03209_ch_T0000689;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03209_ch_T0000689:3;Name=TTTY4;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26491415	26492546	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_611.1;gene_id=HG03209_ch_G0000260;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG03209_ch_G0000260;Name=TTTY17B
HG03209_chrY	CAT	transcript	26491415	26492546	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03209_ch_T0000690;gene_id=HG03209_ch_G0000260;Parent=HG03209_ch_G0000260;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG03209_ch_T0000690;Name=TTTY17B
HG03209_chrY	CAT	exon	26491415	26491520	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03209_ch_T0000690;gene_id=HG03209_ch_G0000260;Parent=HG03209_ch_T0000690;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03209_ch_T0000690:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26491521	26492486	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03209_ch_T0000690;gene_id=HG03209_ch_G0000260;Parent=HG03209_ch_T0000690;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG03209_ch_T0000690:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26492487	26492546	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=HG03209_ch_T0000690;gene_id=HG03209_ch_G0000260;Parent=HG03209_ch_T0000690;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03209_ch_T0000690:1;Name=TTTY17B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26544815	26557920	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.2;gene_id=HG03209_ch_G0000261;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03209_ch_G0000261;Name=LOC107987350
HG03209_chrY	CAT	transcript	26544815	26557920	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_G0000261;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03209_ch_T0000691;Name=LOC107987350
HG03209_chrY	CAT	exon	26544815	26548688	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000691;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000691:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26548689	26549329	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000691;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000691:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26549330	26551962	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000691;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000691:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26551963	26557464	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000691;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000691:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26557465	26557920	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03209_ch_T0000691;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000691;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000691:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26544815	26557920	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_G0000261;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03209_ch_T0000692;Name=LOC107987350
HG03209_chrY	CAT	exon	26544815	26548688	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000692;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000692:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26548689	26549329	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000692;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000692:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26549330	26551494	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000692;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000692:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26551495	26557464	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000692;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03209_ch_T0000692:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26557465	26557920	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03209_ch_T0000692;gene_id=HG03209_ch_G0000261;Parent=HG03209_ch_T0000692;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03209_ch_T0000692:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26646699	26648332	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=HG03209_ch_G0000262;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03209_ch_G0000262;Name=LOC101928626
HG03209_chrY	CAT	transcript	26646699	26648332	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_G0000262;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG03209_ch_T0000693;Name=LOC101928626
HG03209_chrY	CAT	exon	26646699	26647142	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_T0000693;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000693:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26647143	26647279	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_T0000693;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03209_ch_T0000693:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26647280	26647546	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_T0000693;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000693:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26647547	26648241	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_T0000693;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03209_ch_T0000693:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26648242	26648332	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03209_ch_T0000693;gene_id=HG03209_ch_G0000262;Parent=HG03209_ch_T0000693;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03209_ch_T0000693:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26656213	26667216	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=HG03209_ch_G0000263;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03209_ch_G0000263;Name=LOC107987240
HG03209_chrY	CAT	transcript	26656213	26667216	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_G0000263;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG03209_ch_T0000694;Name=LOC107987240
HG03209_chrY	CAT	exon	26656213	26656444	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_T0000694;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000694:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26656445	26666242	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_T0000694;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03209_ch_T0000694:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26666243	26666349	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_T0000694;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000694:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26666350	26666558	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_T0000694;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03209_ch_T0000694:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26666559	26667216	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03209_ch_T0000694;gene_id=HG03209_ch_G0000263;Parent=HG03209_ch_T0000694;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03209_ch_T0000694:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26686077	26702496	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;alternative_source_transcripts=hg002_chrY_paternal_617.1;gene_id=HG03209_ch_G0000264;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG03209_ch_G0000264;Name=SEPTIN14P23
HG03209_chrY	CAT	transcript	26686077	26702496	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_G0000264;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG03209_ch_T0000695;Name=SEPTIN14P23
HG03209_chrY	CAT	exon	26686077	26686655	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_T0000695;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03209_ch_T0000695:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26686656	26694692	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_T0000695;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03209_ch_T0000695:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26694693	26694861	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_T0000695;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03209_ch_T0000695:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26694862	26702402	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_T0000695;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03209_ch_T0000695:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26702403	26702496	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03209_ch_T0000695;gene_id=HG03209_ch_G0000264;Parent=HG03209_ch_T0000695;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03209_ch_T0000695:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26763100	26767965	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=HG03209_ch_G0000265;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG03209_ch_G0000265;Name=GOLGA2P2Y
HG03209_chrY	CAT	transcript	26763100	26767965	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_G0000265;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG03209_ch_T0000696;Name=GOLGA2P2Y
HG03209_chrY	CAT	exon	26763100	26763142	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26763143	26763328	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26763329	26763407	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26763408	26764527	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26764528	26764879	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26764880	26765175	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26765176	26765233	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26765234	26766589	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26766590	26766664	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26766665	26767084	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26767085	26767173	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26767174	26767428	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26767429	26767617	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26767618	26767706	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26767707	26767799	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26767800	26767881	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03209_ch_T0000696:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26767882	26767965	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03209_ch_T0000696;gene_id=HG03209_ch_G0000265;Parent=HG03209_ch_T0000696;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03209_ch_T0000696:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26769964	26771494	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=HG03209_ch_G0000266;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03209_ch_G0000266;Name=LOC102724034
HG03209_chrY	CAT	transcript	26769964	26771494	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_G0000266;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG03209_ch_T0000697;Name=LOC102724034
HG03209_chrY	CAT	exon	26769964	26770387	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_T0000697;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000697:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26770388	26770655	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_T0000697;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03209_ch_T0000697:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26770656	26770780	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_T0000697;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000697:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26770781	26771468	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_T0000697;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03209_ch_T0000697:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26771469	26771494	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03209_ch_T0000697;gene_id=HG03209_ch_G0000266;Parent=HG03209_ch_T0000697;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03209_ch_T0000697:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26790693	26794490	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03209_ch_G0000267;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG03209_ch_G0000267;Name=CSPG4P1Y
HG03209_chrY	CAT	transcript	26790693	26794490	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000698;gene_id=HG03209_ch_G0000267;Parent=HG03209_ch_G0000267;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03209_ch_T0000698;Name=CSPG4P1Y
HG03209_chrY	CAT	exon	26790693	26791415	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000698;gene_id=HG03209_ch_G0000267;Parent=HG03209_ch_T0000698;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03209_ch_T0000698:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26791416	26794418	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000698;gene_id=HG03209_ch_G0000267;Parent=HG03209_ch_T0000698;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03209_ch_T0000698:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26794419	26794490	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03209_ch_T0000698;gene_id=HG03209_ch_G0000267;Parent=HG03209_ch_T0000698;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03209_ch_T0000698:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	26929910	26933309	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=HG03209_ch_G0000268;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG03209_ch_G0000268;Name=CDY1B
HG03209_chrY	CAT	transcript	26929910	26932136	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000699;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03209_ch_T0000699;Name=CDY1B
HG03209_chrY	CAT	exon	26929910	26932136	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000699;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000699;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03209_ch_T0000699:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26930241	26931863	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000699;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000699;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03209_ch_T0000699:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26930241	26930243	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000699;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000699;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03209_ch_T0000699;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26931861	26931863	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000699;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000699;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03209_ch_T0000699;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26929915	26932700	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03209_ch_T0000700;Name=CDY1B
HG03209_chrY	CAT	exon	26929915	26931832	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03209_ch_T0000700:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26930241	26931832	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03209_ch_T0000700:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26930241	26930243	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03209_ch_T0000700;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26931833	26932252	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03209_ch_T0000700:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26932253	26932700	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03209_ch_T0000700:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26932253	26932325	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03209_ch_T0000700:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26932323	26932325	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03209_ch_T0000700;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000700;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03209_ch_T0000700;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26929915	26933309	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_G0000268;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=HG03209_ch_T0000701;Name=CDY1B
HG03209_chrY	CAT	exon	26929915	26931832	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000701;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03209_ch_T0000701:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26931833	26932252	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000701;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03209_ch_T0000701:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26932253	26932452	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000701;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03209_ch_T0000701:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26932453	26933227	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000701;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03209_ch_T0000701:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26933228	26933309	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03209_ch_T0000701;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000701;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03209_ch_T0000701:2;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	26929923	26932700	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03209_ch_T0000702;Name=CDY1B
HG03209_chrY	CAT	exon	26929923	26931632	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03209_ch_T0000702:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26930241	26931632	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03209_ch_T0000702:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	26930241	26930243	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03209_ch_T0000702;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	26931633	26932252	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03209_ch_T0000702:0;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	26932253	26932700	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03209_ch_T0000702:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	26932253	26932273	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03209_ch_T0000702:1;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	26932271	26932273	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03209_ch_T0000702;gene_id=HG03209_ch_G0000268;Parent=HG03209_ch_T0000702;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03209_ch_T0000702;Name=CDY1B;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27036269	27041164	.	+	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=HG03209_ch_G0000269;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG03209_ch_G0000269;Name=TTTY3
HG03209_chrY	CAT	transcript	27036269	27041164	1000	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_G0000269;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG03209_ch_T0000703;Name=TTTY3
HG03209_chrY	CAT	exon	27036269	27036372	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_T0000703;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03209_ch_T0000703:0;Name=TTTY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27036373	27038570	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_T0000703;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03209_ch_T0000703:0;Name=TTTY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27038571	27038705	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_T0000703;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03209_ch_T0000703:1;Name=TTTY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27038706	27041059	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_T0000703;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03209_ch_T0000703:1;Name=TTTY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27041060	27041164	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03209_ch_T0000703;gene_id=HG03209_ch_G0000269;Parent=HG03209_ch_T0000703;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03209_ch_T0000703:2;Name=TTTY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27337071	27340195	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=HG03209_ch_G0000270;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG03209_ch_G0000270;Name=LOC107987352
HG03209_chrY	CAT	transcript	27337071	27340195	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_G0000270;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG03209_ch_T0000704;Name=LOC107987352
HG03209_chrY	CAT	exon	27337071	27338399	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_T0000704;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03209_ch_T0000704:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27338400	27339934	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_T0000704;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03209_ch_T0000704:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27339935	27339995	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_T0000704;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03209_ch_T0000704:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27339996	27340112	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_T0000704;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03209_ch_T0000704:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27340113	27340195	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03209_ch_T0000704;gene_id=HG03209_ch_G0000270;Parent=HG03209_ch_T0000704;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03209_ch_T0000704:2;Name=LOC107987352;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27501647	27543149	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=HG03209_ch_G0000271;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG03209_ch_G0000271;Name=REREP2Y
HG03209_chrY	CAT	transcript	27501647	27543149	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_G0000271;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG03209_ch_T0000705;Name=REREP2Y
HG03209_chrY	CAT	exon	27501647	27506237	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_T0000705;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03209_ch_T0000705:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27506238	27515853	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_T0000705;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03209_ch_T0000705:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27515854	27515926	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_T0000705;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03209_ch_T0000705:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27515927	27542746	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_T0000705;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03209_ch_T0000705:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27542747	27543149	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03209_ch_T0000705;gene_id=HG03209_ch_G0000271;Parent=HG03209_ch_T0000705;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03209_ch_T0000705:2;Name=REREP2Y;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27555154	27555291	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=HG03209_ch_G0000272;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG03209_ch_G0000272;Name=LOC124900507
HG03209_chrY	CAT	transcript	27555154	27555291	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03209_ch_T0000706;gene_id=HG03209_ch_G0000272;Parent=HG03209_ch_G0000272;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG03209_ch_T0000706;Name=LOC124900507
HG03209_chrY	CAT	exon	27555154	27555291	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03209_ch_T0000706;gene_id=HG03209_ch_G0000272;Parent=HG03209_ch_T0000706;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG03209_ch_T0000706:0;Name=LOC124900507;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27708905	27716899	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=HG03209_ch_G0000273;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG03209_ch_G0000273;Name=LOC105377244
HG03209_chrY	CAT	transcript	27708905	27716899	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_G0000273;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG03209_ch_T0000707;Name=LOC105377244
HG03209_chrY	CAT	exon	27708905	27713507	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_T0000707;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03209_ch_T0000707:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27713508	27714373	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_T0000707;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03209_ch_T0000707:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27714374	27714540	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_T0000707;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03209_ch_T0000707:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27714541	27716668	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_T0000707;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03209_ch_T0000707:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27716669	27716899	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03209_ch_T0000707;gene_id=HG03209_ch_G0000273;Parent=HG03209_ch_T0000707;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03209_ch_T0000707:2;Name=LOC105377244;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	27732408	27748581	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=HG03209_ch_G0000274;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG03209_ch_G0000274;Name=LOC102723869
HG03209_chrY	CAT	transcript	27732408	27748581	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_G0000274;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG03209_ch_T0000708;Name=LOC102723869
HG03209_chrY	CAT	exon	27732408	27732675	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03209_ch_T0000708:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27732676	27744711	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03209_ch_T0000708:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27744712	27744740	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03209_ch_T0000708:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27744741	27744834	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03209_ch_T0000708:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27744835	27744907	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03209_ch_T0000708:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	27744908	27748550	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03209_ch_T0000708:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	27748551	27748581	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03209_ch_T0000708;gene_id=HG03209_ch_G0000274;Parent=HG03209_ch_T0000708;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03209_ch_T0000708:3;Name=LOC102723869;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	54457505	54472216	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG03209_ch_G0000275;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000275;Name=SPRY3
HG03209_chrY	CAT	transcript	54457505	54472216	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_G0000275;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG03209_ch_T0000709;Name=SPRY3
HG03209_chrY	CAT	exon	54457505	54457845	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03209_ch_T0000709:0;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54457846	54463477	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG03209_ch_T0000709:0;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54463478	54472216	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03209_ch_T0000709:1;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54463584	54464450	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG03209_ch_T0000709:0;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54463584	54463586	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG03209_ch_T0000709;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54464448	54464450	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000709;gene_id=HG03209_ch_G0000275;Parent=HG03209_ch_T0000709;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG03209_ch_T0000709;Name=SPRY3;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	54573851	54636288	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG03209_ch_G0000276;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000276;Name=VAMP7
HG03209_chrY	CAT	transcript	54573851	54636288	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03209_ch_T0000710;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582054	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54581974	54582054	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54581974	54581976	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03209_ch_T0000710;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582055	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54590622	54590759	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54593009	54593099	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54612332	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54612333	54612400	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54612333	54612400	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54612401	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54632221	54632313	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000710:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000710:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54634402	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000710:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54634468	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000710;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000710;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03209_ch_T0000710;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03209_ch_T0000711;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582119	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54581974	54582119	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54581974	54581976	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03209_ch_T0000711;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582120	54588132	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54588133	54588190	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54588133	54588190	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54588191	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54590622	54590759	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54593009	54593099	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54632221	54632313	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000711:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000711:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54634402	54634658	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000711:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54634656	54634658	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000711;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000711;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03209_ch_T0000711;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03209_ch_T0000712;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582119	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54581974	54582119	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54581974	54581976	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03209_ch_T0000712;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582120	54588132	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54588133	54588190	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54588133	54588190	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54588191	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54590622	54590759	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54593009	54593099	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54612332	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54612333	54612400	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54612333	54612400	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54612401	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54632221	54632313	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000712:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000712:7;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54634402	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000712:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54634468	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000712;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000712;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03209_ch_T0000712;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03209_ch_T0000713;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582140	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54582136	54582140	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54582136	54582138	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03209_ch_T0000713;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582141	54588132	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54588133	54588190	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54588133	54588190	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54588191	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54590622	54590759	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54593009	54593099	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54632221	54632313	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000713:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000713:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54634402	54634658	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000713:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54634656	54634658	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000713;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000713;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03209_ch_T0000713;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03209_ch_T0000714;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582140	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54582136	54582140	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54582136	54582138	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03209_ch_T0000714;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582141	54588132	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54588133	54588190	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54588133	54588190	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54588191	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54590622	54590759	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54593009	54593099	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54612332	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54612333	54612400	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54612333	54612400	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54612401	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54632221	54632313	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03209_ch_T0000714:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03209_ch_T0000714:7;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54634402	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03209_ch_T0000714:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54634468	54634470	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000714;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000714;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03209_ch_T0000714;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03209_ch_T0000715;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582119	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582120	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54612332	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54612333	54612400	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54612401	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000715:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000715;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000715;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000715:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54573851	54636288	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_G0000276;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03209_ch_T0000716;Name=VAMP7
HG03209_chrY	CAT	exon	54573851	54573954	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54573955	54581964	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:0;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54581965	54582054	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54582055	54588132	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:1;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54588133	54588190	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54588191	54590621	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:2;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54590622	54590759	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54590760	54593008	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:3;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54593009	54593099	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54593100	54612332	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:4;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54612333	54612400	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54612401	54632220	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:5;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54632221	54632313	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54632314	54634401	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03209_ch_T0000716:6;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54634402	54636288	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000716;gene_id=HG03209_ch_G0000276;Parent=HG03209_ch_T0000716;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03209_ch_T0000716:7;Name=VAMP7;rna_support=False;reference_support=False
HG03209_chrY	CAT	gene	54690072	54703335	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=HG03209_ch_G0000277;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=HG03209_ch_G0000277;Name=IL9R
HG03209_chrY	CAT	transcript	54690072	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000717;Name=IL9R
HG03209_chrY	CAT	exon	54690072	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000717;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695433	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695434	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695434	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697808	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697809	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697809	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000717:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000717:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702367	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000717:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702365	54702367	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000717;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000717;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000717;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690129	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000718;Name=IL9R
HG03209_chrY	CAT	exon	54690129	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000718;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54700426	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700427	54700659	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700427	54700659	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700660	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000718:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000718:10;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702367	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000718:10;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702365	54702367	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000718;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000718;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000718;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690129	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000719;Name=IL9R
HG03209_chrY	CAT	exon	54690129	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000719;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000719:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000719:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702367	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000719:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702365	54702367	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000719;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000719;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000719;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690129	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000720;Name=IL9R
HG03209_chrY	CAT	exon	54690129	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000720;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697808	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697809	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697809	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54700426	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700427	54700659	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700427	54700659	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700660	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000720:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000720:10;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702367	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000720:10;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702365	54702367	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000720;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000720;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000720;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690129	54703867	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000721;Name=IL9R
HG03209_chrY	CAT	exon	54690129	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000721;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695433	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695434	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695434	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54700426	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000721:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700427	54703867	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000721:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700427	54700663	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000721:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54700661	54700663	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000721;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000721;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000721;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690135	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000722;Name=IL9R
HG03209_chrY	CAT	exon	54690135	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000722;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697808	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697809	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697809	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000722:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000722:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000722:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000722;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000722;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000722;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690137	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000723;Name=IL9R
HG03209_chrY	CAT	exon	54690137	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000723;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000723:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000723:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000723:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000723;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000723;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000723;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690137	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000724;Name=IL9R
HG03209_chrY	CAT	exon	54690137	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000724;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695433	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695434	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695434	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000724:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000724:9;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000724;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000724;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690139	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000725;Name=IL9R
HG03209_chrY	CAT	exon	54690139	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693854	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693855	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695397	54695547	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54695397	54695399	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000725;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000725:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000725:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000725;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000725;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000725;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690142	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000726;Name=IL9R
HG03209_chrY	CAT	exon	54690142	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690280	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690280	54690282	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000726;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690216	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000727;Name=IL9R
HG03209_chrY	CAT	exon	54690216	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690280	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690280	54690282	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54695433	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695434	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695434	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696204	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696205	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696205	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696947	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696948	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696948	54697093	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000727;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54690216	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000728;Name=IL9R
HG03209_chrY	CAT	exon	54690216	54690307	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54690264	54690307	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54690264	54690266	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54690308	54693932	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54693933	54694033	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54693933	54694033	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54694034	54695409	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695410	54695547	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695410	54695547	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54695548	54695976	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54695977	54696088	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54695977	54696088	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696089	54696211	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696212	54696383	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696212	54696383	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54696384	54696976	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54696977	54697093	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54696977	54697093	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54697094	54697805	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54697806	54698007	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54697806	54698007	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698008	54698610	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54698611	54698716	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698611	54698716	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698717	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702367	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702365	54702367	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000728;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	transcript	54698333	54703335	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03209_ch_T0000729;Name=IL9R
HG03209_chrY	CAT	exon	54698333	54698545	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54698361	54698545	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	start_codon	54698361	54698363	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03209_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54698546	54700051	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54700052	54700136	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54700052	54700136	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	intron	54700137	54702330	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03209_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	exon	54702331	54703335	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03209_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	CDS	54702331	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03209_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
HG03209_chrY	CAT	stop_codon	54702925	54702927	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG03209_ch_T0000729;gene_id=HG03209_ch_G0000277;Parent=HG03209_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03209_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False